Gene

KWMTBOMO14327

Pre Gene Modal

BGIBMGA008132

Annotation

PREDICTED:_igLON_family_member_5_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):2139592-2165824      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.128

CDS

ATGTGCACACACTTGCTGCAATGCGAGAGACAATTCAAAAGCGTACCGGTTACCGTGAAGAGTTATAAGGACGAAACTGTGTTGCTGCCCTGCTACTTGGACGAGTCTGATGTCAAACCAAGAGTACGTTGGTACAAAGACGGCACGCTGCTGGGAGACAGTAAGGACCCGGGCACGCTCCTACCTCCTCGAGTGCAAATGCACGCCAACTTCAGCATACAGATCAACGAAATCAGGGAATCGGACACCGCGGCCTATACGTGCGAGGTAATCCGACCGGAGCCATGGGGTCCTATAAGGCAAACGCATTCCGTGGAAGTTCAGTATCCTCCAACAGTAATGACCATACCGGACGATGGTTTTCTCGAGGTCAAGAAAGGAGAATTTGTGGATATAGGATGCGAAACAACCGGCTTTCCACCTCCTGTTGTGGAATGGAGAAAAGACGGAGAAGTCATGGAGATTCTAGAGCATCGTTCTAGAATACGTTTCAAGGCGAGTCACCGGATGCAGGCCGGGGCTTACGAGTGTATCGCCAACAACGGGGTGGGGAGCCCGGTGGCCGCGTCAATCCGAGTCATCATTCAAGACGCTCCCGTAGTGATCGCTCAGAGAACATTCGTGCATACGGCCCCAGGGCTCCGCGCGGCGCTCCTGGCCGACGTGCAATTCGCAGTGCCGCCCGCCCGGACCGCCTGGTACCGGGACGGCCGACCCGTCAACACGGATGACAGAGTACTGTCGATAGCACAAGGCAGTACGTACCAGTTAATATTTAGATCAATCAGGACAACGGATCTCGGTAACTACACTTTCCGAGCTGAGAATAAGCTGGGAATGGCTGACGTTTCATACAAATTGACAGGAGTACCGAACATAGCGTCTTTCAAGGTAGACCCGGCACTAAACAAGGCGTCGCCCACTGGCTTCACCCTGGTGTGGGAAGTGGACTCCTACTCTACTATTATAGAGTACTATCTCTGGATCCGTCAGTACTACGGTAGGCCGGCCACCGACGAACCTGATCCGCTGAACACCGACCCATCCGCCAGCATCTGGAGTAAGATCGTCGTGCCCGGCGATTCTAGTGAAGGACCTATTCATAACGCGCTATACGTTGTGAGGGGACTGACTCCTTCTACGGTTTACGAGGCCCTAGTTGCATCCAGGAACAGGTTTGGTTGGAGTAAGCTGTCGGCTGTTTTGCATTTTGCCACCGAGCCTGGAGTTGGCAACACTCCCTCCGTTGTCGACTACAGCGACATCTCGCCGATATTAGAAGACATTGAAACGGAACCACAGAATATCTCACAAGCTCAAATATTCGGAATTTACGATTTCGTTGATAATAATAATTGTAAGAGATCGTGTATCTCCCAAACTTTGTTCGTCACAGCGTTATTATTGTTGTATTTTAGATTGTGCGTGTAA

Protein

MCTHLLQCERQFKSVPVTVKSYKDETVLLPCYLDESDVKPRVRWYKDGTLLGDSKDPGTLLPPRVQMHANFSIQINEIRESDTAAYTCEVIRPEPWGPIRQTHSVEVQYPPTVMTIPDDGFLEVKKGEFVDIGCETTGFPPPVVEWRKDGEVMEILEHRSRIRFKASHRMQAGAYECIANNGVGSPVAASIRVIIQDAPVVIAQRTFVHTAPGLRAALLADVQFAVPPARTAWYRDGRPVNTDDRVLSIAQGSTYQLIFRSIRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPALNKASPTGFTLVWEVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASIWSKIVVPGDSSEGPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISPILEDIETEPQNISQAQIFGIYDFVDNNNCKRSCISQTLFVTALLLLYFRLCV

Uniprot

H9JF35   A0A194Q726   A0A2H1WLI9   A0A2A4J012   A0A0N0PE26   A0A212EWJ3   + More
A0A2W1BC19   A0A067R0R3   A0A2J7RSJ2   D6WF34   A0A1Y1L5U9   A0A1B6K7D4   A0A0N0BDS5   A0A0T6BDR8   U4UGJ2   N6UEF0   A0A0L7R818   V9IF24   A0A088AUH6   A0A2A3ESQ9   A0A1Y1L8C0   A0A3L8DVR7   A0A026W3C3   A0A195DS48   A0A195FD39   E2A1Q1   A0A158NC16   A0A154NZA0   A0A195BGG1   K7IX75   A0A336K7B3   Q17E45   A0A2R7WD66   A0A182GBK4   A0A182KES9   A0A182UUP9   Q7PZS8   A0A182ITI8   A0A182RST9   A0A182MUQ4   A0A182U0R1   A0A182X095   A0A182HHZ0   A0A182KTD2   A0A1Q3FQV3   A0A1Q3FQW3   A0A182PRL0   A0A182N3M8   A0A182WCZ9   A0A182YCC1   W5JMW6   A0A182FUA2   A0A182Q145   A0A1B0CEM9   A0A084WJ10   E9IFT5   B4KT14   A0A0K8T6Y2   A0A0A1X8P6   A0A0A9Y695   B3NNN5   A0A146KT87   A0A182T4I8   A0A1J1IC01   A0A0K8V7V8   B4P7W9   B4MJG7   Q9XZB7   B4LMY2   W8BLE2   Q9W260   A0A0M4EEN7   B4QH48   Q28XT7   B4I837   B3MEU5   A0A1W4VS16   E0VJT8   A0A3B0J206   B4J8M6   A0A069DUX5   A0A1I8M2V0   A0A1A9ZV37   A0A1A9V6E6   A0A1B0B9W6   T1HY31   A0A1I8PCA4   A0A1B0CZ69   A0A1A9YGA1   E0VTY5   A0A0L0C1N0   E0VY29   A0A1B6L3N1   A0A0K8VGB2   A0A1B0FBU0   A0A139WKX3  

Pubmed

19121390    26354079    22118469    28756777    24845553    18362917    + More
19820115    28004739    23537049    30249741    24508170    20798317    21347285    20075255    17510324    26483478    12364791    20966253    25244985    20920257    23761445    24438588    21282665    17994087    25830018    25401762    26823975    17550304    9856456    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    15632085    20566863    26334808    25315136    26108605   

EMBL

BABH01026958    KQ459386    KPJ01184.1    ODYU01009475    SOQ53941.1    NWSH01004334    + More
PCG65219.1    KQ459946    KPJ19135.1    AGBW02011980    OWR45841.1    KZ150154    PZC72802.1    KK852799    KDR16344.1    NEVH01000258    PNF43798.1    KQ971327    EFA00901.2    GEZM01063608    JAV69052.1    GECU01000392    JAT07315.1    KQ435850    KOX70868.1    LJIG01001491    KRT85449.1    KB632132    ERL89010.1    APGK01030371    KB740770    ENN79006.1    KQ414636    KOC67027.1    JR039965    AEY58924.1    KZ288192    PBC34322.1    GEZM01063609    JAV69051.1    QOIP01000004    RLU24039.1    KK107453    EZA50575.1    KQ980581    KYN15344.1    KQ981673    KYN38296.1    GL435766    EFN72724.1    ADTU01011215    KQ434778    KZC04328.1    KQ976500    KYM83257.1    AAZX01006551    UFQS01000094    UFQT01000094    SSW99265.1    SSX19645.1    CH477287    EAT44693.1    KK854591    PTY17181.1    JXUM01052781    JXUM01052782    KQ561749    KXJ77644.1    AAAB01008986    EAA00292.4    AXCM01012378    APCN01002451    GFDL01005078    JAV29967.1    GFDL01005068    JAV29977.1    ADMH02001097    ETN64114.1    AXCN02001104    AJWK01009016    ATLV01023960    KE525347    KFB50204.1    GL762897    EFZ20568.1    CH933808    EDW09534.2    GBRD01004660    JAG61161.1    GBXI01007182    JAD07110.1    GBHO01016453    JAG27151.1    CH954179    EDV55592.1    GDHC01019081    JAP99547.1    CVRI01000047    CRK97760.1    GDHF01017290    GDHF01009770    JAI35024.1    JAI42544.1    CM000158    EDW92124.1    CH963846    EDW72256.1    AF134113    AAD24192.1    CH940648    EDW62097.1    GAMC01006938    JAB99617.1    AE013599    AY047524    AAF46838.2    AAK77256.1    CP012524    ALC40522.1    CM000362    CM002911    EDX08194.1    KMY95779.1    CM000071    EAL26229.3    CH480824    EDW56762.1    CH902619    EDV36566.2    DS235226    EEB13644.1    OUUW01000001    SPP75075.1    CH916367    EDW01293.1    GBGD01001392    JAC87497.1    JXJN01010629    ACPB03011338    AJVK01020655    DS235775    EEB16841.1    JRES01001125    KNC25324.1    DS235843    EEB18285.1    GEBQ01021843    JAT18134.1    GDHF01014729    JAI37585.1    CCAG010011843    KQ971321    KYB28718.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000027135    + More
UP000235965    UP000007266    UP000053105    UP000030742    UP000019118    UP000053825    UP000005203    UP000242457    UP000279307    UP000053097    UP000078492    UP000078541    UP000000311    UP000005205    UP000076502    UP000078540    UP000002358    UP000008820    UP000069940    UP000249989    UP000075881    UP000075903    UP000007062    UP000075880    UP000075900    UP000075883    UP000075902    UP000076407    UP000075840    UP000075882    UP000075885    UP000075884    UP000075920    UP000076408    UP000000673    UP000069272    UP000075886    UP000092461    UP000030765    UP000009192    UP000008711    UP000075901    UP000183832    UP000002282    UP000007798    UP000008792    UP000000803    UP000092553    UP000000304    UP000001819    UP000001292    UP000007801    UP000192221    UP000009046    UP000268350    UP000001070    UP000095301    UP000092445    UP000078200    UP000092460    UP000015103    UP000095300    UP000092462    UP000092443    UP000037069    UP000092444   

PRIDE

H9JF35    Q9XZB7    Q9W260   

Pfam

PF07679   I-set        + More
PF07686   V-set
PF00041   fn3
PF00047   ig

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013098   Ig_I-set       
IPR003961   FN3_dom       
IPR036116   FN3_sf       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

H9JF35   A0A194Q726   A0A2H1WLI9   A0A2A4J012   A0A0N0PE26   A0A212EWJ3   + More
A0A2W1BC19   A0A067R0R3   A0A2J7RSJ2   D6WF34   A0A1Y1L5U9   A0A1B6K7D4   A0A0N0BDS5   A0A0T6BDR8   U4UGJ2   N6UEF0   A0A0L7R818   V9IF24   A0A088AUH6   A0A2A3ESQ9   A0A1Y1L8C0   A0A3L8DVR7   A0A026W3C3   A0A195DS48   A0A195FD39   E2A1Q1   A0A158NC16   A0A154NZA0   A0A195BGG1   K7IX75   A0A336K7B3   Q17E45   A0A2R7WD66   A0A182GBK4   A0A182KES9   A0A182UUP9   Q7PZS8   A0A182ITI8   A0A182RST9   A0A182MUQ4   A0A182U0R1   A0A182X095   A0A182HHZ0   A0A182KTD2   A0A1Q3FQV3   A0A1Q3FQW3   A0A182PRL0   A0A182N3M8   A0A182WCZ9   A0A182YCC1   W5JMW6   A0A182FUA2   A0A182Q145   A0A1B0CEM9   A0A084WJ10   E9IFT5   B4KT14   A0A0K8T6Y2   A0A0A1X8P6   A0A0A9Y695   B3NNN5   A0A146KT87   A0A182T4I8   A0A1J1IC01   A0A0K8V7V8   B4P7W9   B4MJG7   Q9XZB7   B4LMY2   W8BLE2   Q9W260   A0A0M4EEN7   B4QH48   Q28XT7   B4I837   B3MEU5   A0A1W4VS16   E0VJT8   A0A3B0J206   B4J8M6   A0A069DUX5   A0A1I8M2V0   A0A1A9ZV37   A0A1A9V6E6   A0A1B0B9W6   T1HY31   A0A1I8PCA4   A0A1B0CZ69   A0A1A9YGA1   E0VTY5   A0A0L0C1N0   E0VY29   A0A1B6L3N1   A0A0K8VGB2   A0A1B0FBU0   A0A139WKX3  

PDB

6DLE     E-value=2.17383e-22,     Score=262

KEGG

101745947    no KO assigned | (RefSeq) igLON family member 5

GO

GO:0043025   GO:0050808   GO:0030424   GO:0005886   GO:0007156   GO:0008046   GO:0016021   GO:0016301   GO:0034349   GO:0061564   GO:0008366   GO:0005515   GO:0009966   GO:0016020   GO:0008270   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Length:

476

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.16914

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00997

outside

1  -  476

 

 

Pi

224.621016

Theta

148.826173

Tajima's D

1.1104

CLR

0.774573

CSRT

0.682265886705665

Interpretation

Uncertain