Silkworm Genome Informatics Database

Gene

KWMTBOMO14316 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014204

Annotation

PREDICTED:_uncharacterized_protein_LOC106125684_[Papilio_xuthus]

Location

Bomo_Chr24(+):1772401-1774203 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.348 Extracellular Reliability : 1.628

CDS

ATGTCCAAGATGAACGCAGCAACCCTTCTCATCTTTGTGGTGGGACTAAGCGTCACAGCTTCCAAAGTGCTCAACGGCTCAGTTTTTAGACAGCGCAGCGTGGAGCTATATTCGACTGAGGATCAAGTCGTGGGCGCTTTTGTTATATCCAACGCAGAGAAAAGCGACGGCAAGATATACACAATACACGCTGATGTTAACGATAATCGAAGAGAAAAAGGCGTATACGAAGTAGATTTAAATCTAAACACCACAGTCAAAATTTTGGACAAAGGAAGGGATTTATGTTATGATGATGACAGCACGATATACGTAGCTAGCAATGACGGGATATATGTATATAAAACCGGAGATAAAAGCTTTAAAAAATATGGTACTTTCAAAGCTGACGTTATAAGCCTAACAAAAATGAACGGAAGCGATTTGTTTTACGCCGTAACAAACGACAATAAAGCTTACAAAGTCACTGAAAATGGTAACAAATACGTTTTGGATGATAAATTGAAAGCCGTCAAACAAGTTATGTTTGATAACTTCAATGTATTGCACTATGTCACTTTGGATAATGAAGTATTTAAAGTGAAAGAGACTATGGAAAAAATCGATTTTAATGTTAAAATCGATTACGTTAGGCTCTTGAAGTCGAGCGCAACTGAAGATGACGCCCTTTTTCTTTTAGTCAACAACGACCTGGTGGTTATTAAATCGACAGGAATATTGAAAGTTGTCGAGAACTTGGGGAAAGTGTCAGCATTTTCTAAGGAAACCGATTCATTGCTTATATACGCGGTGGATAAAAAAGTTTACGGATTTATACCGCTTTTGTATGTGATCGGTTCTTTTGCTGATGTTTTGTCTTTAAAATATTAA

Protein

MSKMNAATLLIFVVGLSVTASKVLNGSVFRQRSVELYSTEDQVVGAFVISNAEKSDGKIYTIHADVNDNRREKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDGIYVYKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDKLKAVKQVMFDNFNVLHYVTLDNEVFKVKETMEKIDFNVKIDYVRLLKSSATEDDALFLLVNNDLVVIKSTGILKVVENLGKVSAFSKETDSLLIYAVDKKVYGFIPLLYVIGSFADVLSLKY

Uniprot

H9JXD9 A0A194Q6N7 A0A2W1BQC8 A0A2H1WA94 A0A194Q6N0 I4DNG4 + More
A0A194Q6M8 A0A0N1I8U8 A0A2A4J2F8 H9JXD8 A0A0N1IFG5 A0A0L7LQD5 A0A2H1W8Q4 A0A194QCM9 A0A2A4J3M8 A0A2W1BQG9 A0A1E1WI08 S4PII7 A0A212FFR6 A0A0N1PGS9 A0A194Q879 A0A0N0PDB7 H9JF90 A0A212F6C0 A0A212FFS7

Pubmed

19121390 26354079 28756777 22651552 26227816 23622113 + More
22118469

EMBL

BABH01043326 KQ459386 KPJ01198.1 KZ149980 PZC75824.1 ODYU01007026 + More
SOQ49404.1 KPJ01197.1 AK402895 BAM19454.1 KPJ01192.1 KQ460299 KPJ16156.1 NWSH01003616 PCG66049.1 KPJ16152.1 JTDY01000338 KOB77634.1 SOQ49403.1 KPJ01196.1 PCG66050.1 PZC75825.1 GDQN01004424 JAT86630.1 GAIX01005375 JAA87185.1 AGBW02008773 OWR52581.1 KPJ16153.1 KPJ01195.1 KPJ16154.1 BABH01026938 AGBW02010068 OWR49264.1 OWR52580.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000218220 UP000037510 UP000007151 + More

PRIDE

H9JXD9 H9JXD8 H9JF90

Interpro

IPR011047 Quinoprotein_ADH-like_supfam + More
IPR015943 WD40/YVTN_repeat-like_dom_sf

SUPFAM

SSF50998 SSF50998

Gene 3D

2.130.10.10

ProteinModelPortal

H9JXD9 A0A194Q6N7 A0A2W1BQC8 A0A2H1WA94 A0A194Q6N0 I4DNG4 + More
A0A194Q6M8 A0A0N1I8U8 A0A2A4J2F8 H9JXD8 A0A0N1IFG5 A0A0L7LQD5 A0A2H1W8Q4 A0A194QCM9 A0A2A4J3M8 A0A2W1BQG9 A0A1E1WI08 S4PII7 A0A212FFR6 A0A0N1PGS9 A0A194Q879 A0A0N0PDB7 H9JF90 A0A212F6C0 A0A212FFS7

KEGG

101742472 no KO assigned | (RefSeq) uncharacterized LOC101742472

GO

GO:0016021

SignalP

Position: 1 - 20, Likelihood: 0.972004

Length:

289

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

28.2806799999999

Exp number, first 60 AAs:

17.0098

Total prob of N-in:

0.41832

POSSIBLE N-term signal

sequence

inside

1 - 6

TMhelix

7 - 29

outside

30 - 289

Pi

241.783515

Theta

152.071128

Tajima's D

1.865246

CLR

0

CSRT

0.861906904654767

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
24402669	SVEGVPIAK	95.45	9e-08
29197581	IYTIHADVNDNRR	95.45	9e-08
26280517	GPATEPVFFTTKF	100.00	0.038
24402669	IYTIHADVNDNR	100.00	0.038
28467696	IYTGSPNKQDFIGAVPAPPQIIR	100.00	0.038
29197581	ADVISITK	100.00	0.038

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics