SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14313
Pre Gene Modal
BGIBMGA008135
Annotation
hypothetical_protein_KGM_17531_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 1.588
 

Sequence

CDS
ATGATTGGAATCATAATTGTAACACTTCTATCATCGTCCATCGCCACGAATACCCTCGCGGACAAATGCGAGACAATCAAAATAGGCAATGAATTCTACAAGCGGCAGTTAATCGCGACGATCGACGGATACCCAACCGGAATGGCTGTTGACCCTAAAACCGACAACTTATTCTTCCTGCTCCACAAACGTAATTATACCAAGGGCATACACATACTAAAACGCGGATCTCTAGGAGTTAAATTACTACCGATCTCCGACGACGTGATAGGCCAATGCGTGGCCATAGACACGGTAAACAACATCATTTATATAGGCACAAATCAAGGTATACTTAGCTACGACGATGCCCACTCGGAAATCAACTCAGAGAGGCCCATAGGCGATGACGACGTGAGGAACATATTTATAGACAACAACGACAATCAAATGTATATAACAACCGGAACGAATCACGAAATATTCAGGTTCATGAATAACACAGCCGCCGTGAAGAGATACGACAAAGTACCTAAAGCATACAGCTTTGTTTTAGACAGCAACGGCAACATATTCTACGAATTTGTCGACGGAAGATTGTATTTCTTGTCAATAGACTATTACGAGCCGATCCAATATAAAGGACTTACCAGAGAACTGAAATATATATTACAAATGAACAATAACGATGAAATAATTCTAGCCGTCAAAGGATCGTTGTTTAAATTGACAACGAAAAGTATATTGCCCGAGAAATTAGGTCAGCTGGGCTTCAAAATTACGGGAATGGTATTCGATAATAAAAACAATATGATAATAGGAACTAAAGGTAAAATATACAGATACAAACCGATCGATAGGAACGATCCATGTCCGTCGGAAGACTATTTTATGGCCACTATTTGA
Protein
MIGIIIVTLLSSSIATNTLADKCETIKIGNEFYKRQLIATIDGYPTGMAVDPKTDNLFFLLHKRNYTKGIHILKRGSLGVKLLPISDDVIGQCVAIDTVNNIIYIGTNQGILSYDDAHSEINSERPIGDDDVRNIFIDNNDNQMYITTGTNHEIFRFMNNTAAVKRYDKVPKAYSFVLDSNGNIFYEFVDGRLYFLSIDYYEPIQYKGLTRELKYILQMNNNDEIILAVKGSLFKLTTKSILPEKLGQLGFKITGMVFDNKNNMIIGTKGKIYRYKPIDRNDPCPSEDYFMATI

Summary

Pfam
PF07690   MFS_1        + More
PF00096   zf-C2H2
PF07776   zf-AD
PF07494   Reg_prop
PF02995   DUF229
PF02518   HATPase_c
PF12833   HTH_18
PF07495   Y_Y_Y
PF00512   HisKA
PF00072   Response_reg
Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011044   Quino_amine_DH_bsu       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011042   6-blade_b-propeller_TolB-like       
IPR001958   Tet-R_TetA/multi-R_MdtG       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR011110   Reg_prop       
IPR017850   Alkaline_phosphatase_core_sf       
IPR004245   DUF229       
IPR013783   Ig-like_fold       
IPR004358   Sig_transdc_His_kin-like_C       
IPR018060   HTH_AraC       
IPR001789   Sig_transdc_resp-reg_receiver       
IPR011123   Y_Y_Y       
IPR036890   HATPase_C_sf       
IPR003661   HisK_dim/P       
IPR003594   HATPase_C       
IPR036097   HisK_dim/P_sf       
IPR009057   Homeobox-like_sf       
IPR011006   CheY-like_superfamily       
IPR005467   His_kinase_dom       
SUPFAM
SSF50969   SSF50969        + More
SSF50998   SSF50998       
SSF103473   SSF103473       
SSF57667   SSF57667       
SSF53649   SSF53649       
SSF47384   SSF47384       
SSF55874   SSF55874       
SSF46689   SSF46689       
SSF52172   SSF52172       

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.919075
 
 
Length:
294
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0540200000000002
Exp number, first 60 AAs:
0.0518600000000001
Total prob of N-in:
0.00933
outside
1  -  294
 
 

Population Genetic Test Statistics

Pi
242.578463
Theta
171.530413
Tajima's D
1.328519
CLR
0.033955
CSRT
0.740962951852407
Interpretation
Uncertain
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