Silkworm Genome Informatics Database

Gene

KWMTBOMO14312

Pre Gene Modal

BGIBMGA008136

Annotation

cuticular_protein_RR-2_motif_143_[Bombyx_mori]

Location

Bomo_Chr24(-):1716315-1734130 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.693

CDS

ATGAACGTGAAAACAACGGCCACAATTATGTTCGTAGTCCTACAGCTGACTAGTAGTAACCCAGCCAAGAACAACGCCAGACCAGTCTATGAAGTAATTAACGAACAGCGAGAGGAGAAAAAGGTCAACCCTGGTCCGGTCACCTTCGGAAACCCTCTAGCCGGCCACTCGATCCAGAACGCTAAGCTCTACGCTCAAAACCAGCAAGCTATGTTCAACGCCGAACGGGTCAGACAGCACAAAGCTCAGCTACAGCGATGGACGAAGTCGCCACAACAAGATAGCTACATGAAAGCTTATCACGAGTCACAAGAAAGCCATCAGTTAGCTGTCGAAAAAGAGCAATCCGACTTAAAAACTCCAACTAAAAGACAGGACCGCAGACGCGGCAAAGAAAACGGTCCAACTGAAAAAACAAGAAGCCATCGTTCCCATGGCTCACTAGATTATCAATATGTGCCAAGGTATAAGACTGTTTACGTCTCTCCAGGCACTACTTACGATCAAGGCGTTACGATCAAACCAAACGGGATTGCGTACGTTGAGACAGATGAAAACAAACTTTATACAGAAGCTGTGCCGAGCAAAACTCAATACGTCCACCCTAAAGACTATAGTCACGCACAAAATTACGAAACATCTGATATAGCAACATTAAACGCATTATTGGAACAGAATCCACAAGATCAACTAACGAATTTCAATGCCATGTTACACGCTAACGAAAACAAAGAACATTTACAAACGCCTGTGGAATTGTTTTTCTATAATAACGCGAATAATGTTTATCACCCAACTAACGGCGGCTATACAAGCTACGCGCCCAACGCGTATACACAAGAGACTCGGTACAAAGACCACACACCCATCAAAGAAGACTTAGACGACATTGAGGACCCCAATAAACACACCACAGTTAAAAACTACGGGGTCCAACCGACAACAAATCTCCCAGATGAAGACAGTACTATACCTTATTACAATAACGCAGGACCGACTACACAGAGAGTAGTGGAAGAGAAACCTAAATATCAAGCCGTGAAATACGAAAAACTGTATCCGTTTCAAGACTCAAAAGATAGCGAATCAGGGATTTACATGCACCACAACACCGAGAACCAGGGAGTTCATCGCTTGAATCAAGATGGAGTCGAGGTTTCCGCGTATGACGATGCCGAACTCCAGTACGCCGCGAACTATGAATTCGGCTACAGAGTTAGAGATCACCACACAGGCAATTATTACGGTCACCACGAGGCGAAGAAGGATGGTAAGACGAACGGGCATTACCACGTTTTGCTGCCCGACGGCAGGATGCAGAAGGTTAAGTACACCGCAGGCCCTGACGGGTTCCACGCTGACATTAGCTATGACAATATGACGGAACATTAA

Protein

MNVKTTATIMFVVLQLTSSNPAKNNARPVYEVINEQREEKKVNPGPVTFGNPLAGHSIQNAKLYAQNQQAMFNAERVRQHKAQLQRWTKSPQQDSYMKAYHESQESHQLAVEKEQSDLKTPTKRQDRRRGKENGPTEKTRSHRSHGSLDYQYVPRYKTVYVSPGTTYDQGVTIKPNGIAYVETDENKLYTEAVPSKTQYVHPKDYSHAQNYETSDIATLNALLEQNPQDQLTNFNAMLHANENKEHLQTPVELFFYNNANNVYHPTNGGYTSYAPNAYTQETRYKDHTPIKEDLDDIEDPNKHTTVKNYGVQPTTNLPDEDSTIPYYNNAGPTTQRVVEEKPKYQAVKYEKLYPFQDSKDSESGIYMHHNTENQGVHRLNQDGVEVSAYDDAELQYAANYEFGYRVRDHHTGNYYGHHEAKKDGKTNGHYHVLLPDGRMQKVKYTAGPDGFHADISYDNMTEH

Uniprot

C0H6Y5 A0A3S2LBD4 A0A194QCM4 A0A2A4J3G4 A0A2H1W618 A0A2A4J1V4 + More
A0A2W1BLP3 A0A212F573 A0A0N0PD84

Pubmed

19121390 19280704 26354079 28756777 22118469

EMBL

BABH01026933 BR000644 FAA00646.1 RSAL01000055 RVE49937.1 KQ459386 + More
KPJ01191.1 NWSH01003616 PCG66054.1 ODYU01006580 SOQ48545.1 PCG66055.1 KZ149980 PZC75828.1 AGBW02010227 OWR48886.1 KQ460299 KPJ16157.1

Proteomes

UP000005204 UP000283053 UP000053268 UP000218220 UP000007151 UP000053240 + More

PRIDE

C0H6Y5

Pfam

PF00379 Chitin_bind_4

Interpro

IPR000618 Insect_cuticle + More
IPR031311 CHIT_BIND_RR_consensus

ProteinModelPortal

C0H6Y5 A0A3S2LBD4 A0A194QCM4 A0A2A4J3G4 A0A2H1W618 A0A2A4J1V4 + More
A0A2W1BLP3 A0A212F573 A0A0N0PD84

KEGG

100379335 no KO assigned | (RefSeq) CPR143, BmorCPR143; cuticular protein RR-2 motif 143

GO

GO:0042302 GO:0003676 GO:0051536 GO:0008270 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

SignalP

Position: 1 - 19, Likelihood: 0.865103

Length:

463

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0023

Exp number, first 60 AAs:

0.00229

Total prob of N-in:

0.01836

outside

1 - 463

Pi

237.006292

Theta

181.714748

Tajima's D

1.168138

CLR

0.154656

CSRT

0.704014799260037

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics