Silkworm Genome Informatics Database

Gene

KWMTBOMO14311

Pre Gene Modal

BGIBMGA008185

Annotation

putative_F-box_protein_28_[Danaus_plexippus]

Location

Bomo_Chr24(+):1699471-1709281 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.236

CDS

ATGGAGTTTCTAGATCTTCCTTTAGTTATGATAGAAAATATATTTTCATATTTTTCACACGATGAAATCGCGAAGAATCGATTGGTGTGTAGAACATTTAACGAAATATGCTCCCGAATGCTGAACCGCGGTTTCCTGATGATAGAGCGTCGACATGCAATGGCCTTGAAAACAGTCAAAGCTCAATTGCCCAGGCGCGAGTCAGAACGCAGACATCATCCTTTGTCTCGTCACTGCGATATCTTGACTTCGATAGAGACACGGATATCAATGCTCAGCATGACATATTCAAAGTACATTGACACAGGAATGTGCTGTTTTATACCTGGAAAGGTTATAGATGAAATAAAACGCGTTTTGACCATACTGGACACGTCCGCGACGCCTCCTCGTGCTCACGAAGTACTACAGGAGCTCAGGGATATATCGAGCATGGCTATTGAGCACTTCGACGATAAGATATCGCCCGCATTTAGGAAGAACCTTCAGGAGGGTATAGCGCAGGTGGCTCCCAAACCGGGAAACGGATTGATAGCCATGCGTCAGGAGATCTTGACCCTACAACGTCGCTCAACGTTGAACTCCAACCTATCATTGTGTCTCGGTTTGCAGTACAAGAAGTTTCAGAATCGACTCGATCGCTTGGCCCGGTACCGGAAGTTGGCCATGAAGCAAGTCGTCATCATCAGGCAGCTGACCAAGAAACAAAGGGAACAGGATTTGGCCATCGCCGAGCTGAAGAAGCGTATTGAAGAATGCGACATCAAATACCGTGAATTGACACACACCAATCAAGCCGGTGGAAAGGCTATTGCCGCCGCGGCGTCAGTGGGAGTCGTCGAGGCGAGTCCTTCGCAGGAGCTACGTCACTTCTCGAGCCAAATCAAACTGGACCTCTCCGTGTTGCCCATTGGAACGTCCAAACTTAACAACAAACTCACCCCAAACATAAAGCCAAGGAATCCAATGATCAAACTGCCAAGTCTACTGAACGACGACGACGCCAGTAAGGCCCGCGACGCGCCGACCGCGCACGAGGCTCGCCCCGGGACCGCGGCCAAGCGCGCCGCCAGGAAGAGGAAGACCAGCACCGCCACCAACAGCGGCCTCGCGCACAAAATGAGGCACTTGGCGAACATGTCGGATGGAGATTTAAACGACCAGGCGTCCCTACGAAACATCTCTTCTTATTTCACCGACGAAGACATCAAACGTTTCCTGGAAATGCACGAGACGGACCGGCGCCGGAAGCGGCCGCCGCCTTGCGAGACCGGCCTCAGCAACGAGATCAAGCGCCTCGCCGGCCCGGCCGAGGGCGCCGCCCCCCCGCGCGCCGGCAAGCGACAGCGCCTGGACTGA

Protein

MEFLDLPLVMIENIFSYFSHDEIAKNRLVCRTFNEICSRMLNRGFLMIERRHAMALKTVKAQLPRRESERRHHPLSRHCDILTSIETRISMLSMTYSKYIDTGMCCFIPGKVIDEIKRVLTILDTSATPPRAHEVLQELRDISSMAIEHFDDKISPAFRKNLQEGIAQVAPKPGNGLIAMRQEILTLQRRSTLNSNLSLCLGLQYKKFQNRLDRLARYRKLAMKQVVIIRQLTKKQREQDLAIAELKKRIEECDIKYRELTHTNQAGGKAIAAAASVGVVEASPSQELRHFSSQIKLDLSVLPIGTSKLNNKLTPNIKPRNPMIKLPSLLNDDDASKARDAPTAHEARPGTAAKRAARKRKTSTATNSGLAHKMRHLANMSDGDLNDQASLRNISSYFTDEDIKRFLEMHETDRRRKRPPPCETGLSNEIKRLAGPAEGAAPPRAGKRQRLD

Uniprot

H9JF88 A0A2A4IT20 A0A212F575 A0A2H1WGH7 A0A0N1IPJ6 A0A194Q874 + More

Pubmed

19121390 22118469 26354079

EMBL

BABH01026932 NWSH01008528 PCG62528.1 AGBW02010227 OWR48885.1 ODYU01008180 + More
SOQ51564.1 KQ460299 KPJ16158.1 KQ459386 KPJ01190.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000053268

PRIDE

H9JF88

Pfam

PF00646 F-box + More
PF00096 zf-C2H2

Interpro

IPR039719   FBXO28        + More
IPR036047   F-box-like_dom_sf
IPR001810   F-box_dom
IPR013087   Znf_C2H2_type
IPR036236   Znf_C2H2_sf

SUPFAM

SSF81383 SSF81383 + More
SSF57667 SSF57667

ProteinModelPortal

H9JF88 A0A2A4IT20 A0A212F575 A0A2H1WGH7 A0A0N1IPJ6 A0A194Q874 + More

KEGG

101738788 K10306 F-box protein 28 | (RefSeq) F-box only protein 28

GO

GO:0003676 GO:0005515 GO:0051536 GO:0008270 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR13252

Length:

452

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00037

outside

1 - 452

Pi

218.351314

Theta

161.025954

Tajima's D

1.125198

CLR

0.026714

CSRT

0.694565271736413

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics