SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14300
Annotation
zinc_finger_protein_NANOS-P_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.267
 

Sequence

CDS
ATGTATCCGCGAAAAAGCTTATTGGATCTAAATAATAATATGTTGGACGTGAATAATTTGTTTCCAACGCCCATGGAAAGTGATTTATTGCAGACATTATTAAATCCAGGCCGATCACCATATAACCAATCAACGCCAATAAATTCAAGCTCAAATGATTCAACAACCCCCGAGTCCCTCATAGATGTATCTATGAAATCTTTTATGAAAACTGATAATGAAACTCCTAGTGCAGTACGACGCCATCGTCCAATATTTGGTCGAAGAATTATGATTGGGGATGCACAGCCAACATTTGAACCAACTCACACACCAAGCTTTGAAACGACATTGGATAAAAGTCTTTCAAATATTTGGAAAGAGGACAATGACTCTGTATTCTCACAAACACCCCCAAAGTATTATAATAATGAATACAATTACAATAATAGTGAATTCTATGAACTATTCCCGAAAGAGAGCAGATCAGCAATTGGAAACAATTTGATGAACAATAGAAACTTTTCTATGACATCTTCTGATTTGTCATTGAATATGAACACATATCAATCACAGTTCACATCAGCAAACTCTTCAAATATGAGAGCTTCAAAACCTTTTGGGCCGACACAATTCGGACCATTGACCACACCACAAGTAACATTTGAGAGTAGCTCAAAATTTCCATTCAATACGAAGATATGTTCATTTTGCCGGAAGAATGGCGAAGCTCCAAACGTGTACGGGACACATACTGTGAGGCAGAAAATAGGAAACAGAAGCGTAGTCATGTGCCCCATCTTGAGACGTCACGTGTGTAACACATGCGGAGAGACCGGAGACAACGCACATACCATAACATACTGCCCCATTTTGAGAAGAACAAACAATGGTGCACCGCTTCAGTCTACCACAATTACTCTGAAGAATACTCGTGTTAAGAGCAATGGTAGGAGACGATTTTGA
Protein
MYPRKSLLDLNNNMLDVNNLFPTPMESDLLQTLLNPGRSPYNQSTPINSSSNDSTTPESLIDVSMKSFMKTDNETPSAVRRHRPIFGRRIMIGDAQPTFEPTHTPSFETTLDKSLSNIWKEDNDSVFSQTPPKYYNNEYNYNNSEFYELFPKESRSAIGNNLMNNRNFSMTSSDLSLNMNTYQSQFTSANSSNMRASKPFGPTQFGPLTTPQVTFESSSKFPFNTKICSFCRKNGEAPNVYGTHTVRQKIGNRSVVMCPILRRHVCNTCGETGDNAHTITYCPILRRTNNGAPLQSTTITLKNTRVKSNGRRRF

Summary

Similarity
Belongs to the nanos family.
Pfam
PF05741   zf-nanos
Interpro
IPR038129   Nanos_sf        + More
IPR008705   Nanos/Xcar2       
IPR024161   Znf_nanos-typ       
Gene 3D
PDB
3ALR     E-value=3.20742e-09,     Score=146

Ontologies

Topology

Length:
314
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02016
outside
1  -  314
 
 

Population Genetic Test Statistics

Pi
246.067285
Theta
189.493707
Tajima's D
0.987619
CLR
0.000168
CSRT
0.656567171641418
Interpretation
Uncertain
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