SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14293
Pre Gene Modal
BGIBMGA008144
Annotation
PREDICTED:_uncharacterized_protein_LOC101744639_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.054 Mitochondrial   Reliability : 1.578
 

Sequence

CDS
ATGCACCGGACGTCTTATCCTTTAGGCCACGACGACTTTCAAAAGGACATAACCTGTACGTACAGAGACATCATATACCACAGTGACAACGAGTACGTATTGGGACCGCCGACTGACGTCCGGGATGGCGGCGTGTACCACCTGACGAGAAGCGACCACGTCAAGATCAAATGCGTAGGCACGCATCTGCATAGCATCCTTCCGTCGAGATGGTCAGGTCATTCGCTGGGATTCCGGTCGACGGTGGCGGCGCCGCCCCCCGACCGCGATGACGCTCTCGACGTGCTCATATTCGGGTTCGATTCCACGTCGAAGAACGGCTTCATAAGGAGTATGCCGAAGAGCTACAAATACCTGACCGAGGAGCTGAATGGCTACGTTCTAGACGGGTACGGCATACTCGGTGACGGCACGCCTGCCGCCTTATTCCCCATACTCACGGGCAAGAACGAGTTGGAGCTACCAGACGTCAGGAAGAAGACGAAGAACGGCAACACCTTAGACTGTATGCCGTTCATATTCAACCAACTAAAGGGGGACGGTTACCGCACGGCATATTTCGAGGACATGCCCTGGATAGGAACGTTTCAGTACCGGTTTAATGGTTTCCTCCATCAGCCGGCCGATCATTACTTGAGGGCATTCTACCTCGAGGAGTCGAACAGAGGCAAGAAGTGGTGGAGGGGCAGCAACAGCAAGTACTGCATAGGAGACACTCCTCAGTACAAGCTAATGATGAACATTACCGATCAGTTCTTTCGTTTGGACGGCAAGAAGTTTTGCTTCACCTTCATAGCCGACATAACTCATGATGACATCAACATGATATCGACAGCTGACGATGACACTGTCGACTTCTTGAAGCTGTTCAAGGAACAAGGAAGGCTTGAGAACACCATGCTATTCGTGATGGGCGACCACGGACCCAGGTACTCGAAGGTCCGCAACACGCTGCAAGGCAAGCTGGAGGAGCGTCTACCGCTGATGGTGGTGGTCCCGGCGGCGCGGCTGGTGCGCGCGCGGCCCGCCGTGCTCGAAGCGCTGCGACACAACCGCGCCGCGCTCACCACGCCGCACGACGTGCACGCCACGCTGCTCGACGCGCTGCGCCGCCCCGCCCCGCCCCCCGCCTACACCGTGCCCGGCGCCGACCTGCCGCGCGCGCTCTCCCTGCTGCAGCCGATCCCGCGGAACCGGTCGTGCAGCGAGGCGGGCATTGAGCCGCACTGGTGCGCGTGCATGCGCTGGAGCCCCGTGCCCCCCGCCGACCCGCTGCACGCCGCCGCCCCCCGCGCGCTACTGCAATACATCAACACGCTCACCGAGCCCAAAAGAGCGTCGTGCGTCCCCCGCACGCTGTCCGCGGTGCACTGGGTGCTGAGGGCCCACGCCAACAGTAGGGTGCTCTCCTTCATCGAGGCCAAGGACGCGGACGGCTACGTGGGGAAGTTCGGGGCCAAGCTCAAGGTCAACAGGGAGAACTTGCAGGTCAAGATCTCCGTCGGTCCCGGCGAGGGGATATACGAGGCCTCGCTCGCGTACCTGAGAAAGGAGGACAAGTTCCTCATCGAGTCCAGAGACATATCCAGGACGAACGCGTACAACGACGAGCCCAGCTGCATCAGCGCCACGCACCCCCACCTCAACAAGTACTGTTACTGCAAAATATAG
Protein
MHRTSYPLGHDDFQKDITCTYRDIIYHSDNEYVLGPPTDVRDGGVYHLTRSDHVKIKCVGTHLHSILPSRWSGHSLGFRSTVAAPPPDRDDALDVLIFGFDSTSKNGFIRSMPKSYKYLTEELNGYVLDGYGILGDGTPAALFPILTGKNELELPDVRKKTKNGNTLDCMPFIFNQLKGDGYRTAYFEDMPWIGTFQYRFNGFLHQPADHYLRAFYLEESNRGKKWWRGSNSKYCIGDTPQYKLMMNITDQFFRLDGKKFCFTFIADITHDDINMISTADDDTVDFLKLFKEQGRLENTMLFVMGDHGPRYSKVRNTLQGKLEERLPLMVVVPAARLVRARPAVLEALRHNRAALTTPHDVHATLLDALRRPAPPPAYTVPGADLPRALSLLQPIPRNRSCSEAGIEPHWCACMRWSPVPPADPLHAAAPRALLQYINTLTEPKRASCVPRTLSAVHWVLRAHANSRVLSFIEAKDADGYVGKFGAKLKVNRENLQVKISVGPGEGIYEASLAYLRKEDKFLIESRDISRTNAYNDEPSCISATHPHLNKYCYCKI

Summary

EMBL
KQ459386    KPJ01214.1    AGBW02012951    OWR44178.1    KQ460423    KPJ14844.1    + More
KPJ14833.1    JTDY01002045    KOB72244.1    AGBW02013802    OWR42796.1    ODYU01002890    SOQ40941.1    NWSH01000023    PCG80645.1    KQ971342    EFA03884.1    LJIG01022597    KRT79734.1    UFQS01000197    UFQT01000197    SSX01187.1    SSX21567.1    KPJ01224.1    KK854603    PTY17274.1    CH940650    EDW67207.1    KQ435736    KOX76983.1    KQ414768    KOC61371.1    GEZM01017097    GEZM01017096    GEZM01017095    GEZM01017094    JAV90932.1    AXCN02000015    GBHO01024436    GBHO01024431    GDHC01016508    GDHC01005499    JAG19168.1    JAG19173.1    JAQ02121.1    JAQ13130.1    ADMH02001019    ETN64424.1    AAAB01008888    EAA08955.5    KQ434804    KZC06099.1    APCN01005540    KQ762207    OAD56073.1    AXCM01000623    ATLV01013150    KE524842    KFB37346.1    CH933806    EDW15152.1    CH479185    EDW38348.1    CM000070    EAL29058.1    GAMC01019582    JAB86973.1    DS233377    EDS29681.1    GFDL01014055    JAV20990.1    CH916369    EDV92608.1    GBHO01024434    GBHO01024433    JAG19170.1    JAG19171.1    GECU01000368    JAT07339.1    ODYU01004246    SOQ43918.1    CH477695    EAT37158.1    AJWK01005593    AJWK01005594    AY058755    AAL13984.1    AE014297    BT150241    AAF55169.1    AGV77143.1    OUUW01000007    SPP83511.1    KK853083    KDR11645.1    DS235845    EEB18492.1    AJVK01017387    GEDC01009960    JAS27338.1    JH431556    ACPB03002176    NCKU01010949    RWS00604.1    JH815790    EKC38410.1    CVRI01000057    CRL01832.1    NEVH01006987    PNF36237.1    GL446098    EFN88497.1    JH816402    EKC22605.1    PNF36236.1    KB630727    ERL83825.1    APGK01040621    KB740984    ENN76196.1    KB632357    ERL93435.1    KZ149968    PZC76132.1    KQ976812    KYN08157.1    KK107039    QOIP01000006    EZA61841.1    RLU22184.1    KK112918    KFM58832.1    PYGN01000755    PSN41256.1    KQ980050    KYN18061.1    KQ982630    KYQ53420.1    IAAA01022626    IAAA01022627    LAA07235.1    KQ981953    KYN32339.1    GL887680    EGI70467.1    KQ976417    KYM89671.1    GL435204    EFN73791.1    CCAG010012028    KZ288193    PBC34169.1    ABLF02024211    ABLF02024212    ABLF02024216    ABLF02024219    NCKU01008508    RWS01853.1    KQ418645    KOF86431.1    KB202283    ESO91374.1   
Pfam
PF02995   DUF229        + More
PF00213   OSCP
Interpro
IPR004245   DUF229        + More
IPR017850   Alkaline_phosphatase_core_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR026015   ATP_synth_OSCP/delta_N_sf       
IPR000711   ATPase_OSCP/dsu       
SUPFAM
SSF53649   SSF53649        + More
SSF47928   SSF47928       
Gene 3D

Ontologies

Topology

Length:
556
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02122
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00216
outside
1  -  556
 
 

Population Genetic Test Statistics

Pi
5.54798
Theta
16.829526
Tajima's D
-1.220064
CLR
0.304184
CSRT
0.095645217739113
Interpretation
Uncertain
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