Gene

KWMTBOMO14289

Annotation

hypothetical_protein_RR48_04989_[Papilio_machaon]

Location

Bomo_Chr24(+):1016786-1021527      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.067

CDS

ATGACTGAGCAAAAGGAACTAATAAAGAAACGTAGCAGCATCAAAGGTCGATTAACAGTGTTCGCGAGTCATCTAAAAACAATAGATGAATCAACGATCACTGCCACAGAGGTCAGGGAGTTACAATTGCGCATTGGTAAGATCGAAGCTTTATATCACTTATACGATGAGGTACAGTTGAAAATAGAGTGCAGCTCTGATAACATGGATATACAAATGGCTGAAAGAACAGAGTTTGAAACTCAGTATTATAAAACATGCGCTCATGCACATGAAATTCTAAATACATACCAAAGGCTACATGAGAAGATTGAAAACGCATCGAATGCTTCACATTCACGCGCTAATCATAGACTTGTTAAGTTACCTACCATCCAGCTGCCCAAATTTGGAGCGGATCCCAAGTACTACTTACCTTCTGCCATCAATCTTATTATTGGTGCTGATGTTTTCTGGGACATTTTGGGTTCTCAAAGAATTAAATTAGGGAATGGCAAGCCGATTCTTTATGAGACTAGACTTGGTTGGATAGTCTCTGGTCCAGTAACCAGTGGCCACACATCGACTTGGCCATGTAAAATTAAATGTAATGTCACTCAAGTTGATTCTATGACTTCTTATAATTTTAATGATGACATCCAAAACCAACTCATGCGTTTTTGGCAGCTTGAAGAAGTCTGTCCTCAGTCAAATCATTATTTCCCTGAAGAGAAGTTATGTGAAGAACATTTTGTTAAAAATACAACTCGCCTCGCAGACGGACGGTTTTGCGTAAGAATCCCATTGAAACAAGCGCCTGACGTTTTGGGAAGTTCTTATCAGCGAGCTAAACATTGCTTATTATCTTTGGAGCGTCGACTCAAAGGTGATGATTCATTTAGTAAAATGTACAAGGAATTTATGCGCGAGTATAAAAATCTTGGTCACATGTCAGAGTGCAAACCGAATATTGAGTTGCCTCATTACTTCATTCCACATCATGGTGTCCTTCGTGAATGTAGTACGACCACTAAGTTGCGCGTCGTATTTAATGCGAGCAGCCCTACTTCCTCAAGGGTTTCATTTAATGACATTCAAATGATAGGACCCACGGTGCAAGACGATCTTCTGTCAATTCTTTTACGTTTTCGGCAGCACAAGTATGTTCTTGTAGCTGACGTTGAGAAAATGTATAGGCAGATCGTCGTGCATGAAGCGGACAGACCGTTACAACAGATTATTTGGCGCGAAAACGAGTCAGATTCACTCAAATCATATGCTTTAAACAGAGTCAGTTATGGAACTGCTAGCGCACCCTATCTCGCTAGTAGATGTTTGAAACAAATAGGTATAGAATGTAAGGACCCCACGATAGCGGACATCATTATCCATGATTTTTATGTCGACGATTTGTTGACTGGAAGTGACTTCATCAGCGAAGCATTGCGCATCCGTGAGCAAGTTTCTGCTGAATTAGCATCAGCTTGCATGCCTTTGAGAAAATGGAAGTCCAATGAACCTCAACTGTTATCACAAGCCAGTCATCAACCATCCCTTGAATTAAAACTCGGAGATGCTGAACCTAATAAGACTCTTGGCCTCGGATGGGATTCAGAGTCAGACCAATTTCATTTTCCTGTCAATCCTGTCATTGTTAAGGGAAAAACAAAGCGTGACATCCTCTCTGTCATAGCTCAAATATTTGACCCACTTGGGATCTTATCACCTTTCATCATTTCGATGAAATTAATTTTACAAAGGTTGTGGCTTCAACGCTTATCTTGGGATGAGGAGTTGCCTTCAGAGATATACCAGGCGTGGATCGAAACTGTCCACAGCCTGCCTCATTTGAGCAGCTTGCGCATACCGCGACATGTCATTTGTGATTCTCACTCCCAGTTGGAGTTACACATTTTTACTGACGCGTCTGAGCGTGCATATGGTGCTTGTGTTTATGTGCGTAGTATTGACTACGACGATGCAGTCTCAGTCCAGCTACTTACCGCTAAGAGCCGGGTTGCTCCCATAAAGCCAACGACTATACCCCGACTAGAACTCTGCGGCGCGTTGATTGGTGCTCGAATTTCTGAGAAATGTGTAACTGCATTGCGTGCTAAATTCAACCGCGTTATATTTTGGTCAGATTCTACCATTGTTTTAGGCTGGCTAAAAATGTTGCCATCTAAATTACAGCCATTTGTGCGTAATCGTATTGCAGAGATTTAG

Protein

MTEQKELIKKRSSIKGRLTVFASHLKTIDESTITATEVRELQLRIGKIEALYHLYDEVQLKIECSSDNMDIQMAERTEFETQYYKTCAHAHEILNTYQRLHEKIENASNASHSRANHRLVKLPTIQLPKFGADPKYYLPSAINLIIGADVFWDILGSQRIKLGNGKPILYETRLGWIVSGPVTSGHTSTWPCKIKCNVTQVDSMTSYNFNDDIQNQLMRFWQLEEVCPQSNHYFPEEKLCEEHFVKNTTRLADGRFCVRIPLKQAPDVLGSSYQRAKHCLLSLERRLKGDDSFSKMYKEFMREYKNLGHMSECKPNIELPHYFIPHHGVLRECSTTTKLRVVFNASSPTSSRVSFNDIQMIGPTVQDDLLSILLRFRQHKYVLVADVEKMYRQIVVHEADRPLQQIIWRENESDSLKSYALNRVSYGTASAPYLASRCLKQIGIECKDPTIADIIIHDFYVDDLLTGSDFISEALRIREQVSAELASACMPLRKWKSNEPQLLSQASHQPSLELKLGDAEPNKTLGLGWDSESDQFHFPVNPVIVKGKTKRDILSVIAQIFDPLGILSPFIISMKLILQRLWLQRLSWDEELPSEIYQAWIETVHSLPHLSSLRIPRHVICDSHSQLELHIFTDASERAYGACVYVRSIDYDDAVSVQLLTAKSRVAPIKPTTIPRLELCGALIGARISEKCVTALRAKFNRVIFWSDSTIVLGWLKMLPSKLQPFVRNRIAEI

Uniprot

A0A2A4JBY8   A0A2A4JM97   A0A0N0PBK0   A0A194QJ48   A0A0N1IPF2   A0A3S2N9P3   + More
A0A194RI04   A0A0N1IBH6   A0A194RAG7   A0A194RGQ8   A0A023F0J1   A0A1Y1MTT1   A0A1Y1N4T1   A0A023EZB2   A0A023EZC2   A0A2A4JL65   V5GXV6   V5GU69   W8ANH7   A0A1Y1LAD7   A0A2S2PNZ4   A0A2S2NCU7   A0A1Y1L369   J9K169   X1WN86   A0A0J7KD64   A0A2S2NLW5   A0A2S2Q6Z5   A0A2S2PCB8   A0A2S2PLU2   W4VR47   A0A1Y1N3M1   A0A0P6J6G2   A0A0P6K153   A0A2S2P9U8   X1WNM7   A0A1Y1MY22   A0A1Y1MYB7   A0A2S2PKV3   A0A2S2P1P0   A0A2S2QQM0   A0A2S2N8B4   J9LHB7   A0A1Y1KFT0   A0A2S2N8W8   A0A2S2PBM2   A0A1W7R6B7   A0A0J7K2F3   A0A0J7MVH5   A0A0J7K765   A0A182H647   A0A2S2PFV9   A0A2S2QB76   A0A1W7R6J2   J9KCB6   A0A1W7R6L7   J9LYM7   K7J7V9   A0A2M4B8V6   J9KLD6   J9LVB4   A0A182HA33   J9LH75   A0A1W7R6F4   A0A2S2PTX9   A0A2A4IUY1   J9K774   A0A224XG39   E9J9Y8   A0A0J7N465   X1WL76   A0A1W7R6S6   A0A0J7KCR4   J9JWX5   X1WWR0   A0A2A4IUL3   A0A1I8M1N7   J9K3V8   X1WVK5   J9KBH1   A0A1W7R6N3   A0A226D417   A0A1S3DJJ8   J9JT64   A0A087T9T6   K7JBZ1   A0A139W8E1   K7JBZ2   A0A1S3DIE2   A0A3Q0JDB5   A0A1S3DHZ9   X1XU20   A0A2S2PUJ2   A0A3Q0JI79   A0A0J7ND98   X1XTY9   A0A0J7KBZ0   A0A226DW31   A0A2S2N7B6  

Pubmed

26354079    25474469    28004739    24495485    26999592    26483478    + More
20075255    21282665    25315136    18362917    19820115   

EMBL

NWSH01001945    PCG69607.1    NWSH01001014    PCG73111.1    KQ460970    KPJ10166.1    + More
KQ458793    KPJ04955.1    KQ460545    KPJ14069.1    RSAL01000402    RVE41913.1    KQ460205    KPJ16960.1    KQ459312    KPJ01687.1    KQ460500    KPJ14270.1    KQ460211    KPJ16510.1    GBBI01004211    JAC14501.1    GEZM01021505    JAV88969.1    GEZM01012999    JAV92824.1    GBBI01004140    JAC14572.1    GBBI01004139    JAC14573.1    NWSH01001201    PCG72150.1    GALX01003263    JAB65203.1    GALX01003264    JAB65202.1    GAMC01020552    JAB86003.1    GEZM01066274    JAV68017.1    GGMR01018506    MBY31125.1    GGMR01002340    MBY14959.1    GEZM01066272    JAV68024.1    ABLF02024568    ABLF02041590    LBMM01009461    KMQ88124.1    GGMR01005535    MBY18154.1    GGMS01004301    MBY73504.1    GGMR01014413    MBY27032.1    GGMR01017803    MBY30422.1    GANO01004788    JAB55083.1    GEZM01018629    GEZM01018623    JAV90127.1    GDUN01000088    JAN95831.1    GDUN01000087    JAN95832.1    GGMR01013586    MBY26205.1    ABLF02042806    GEZM01018702    JAV90048.1    GEZM01018619    JAV90138.1    GGMR01017408    MBY30027.1    GGMR01010750    MBY23369.1    GGMS01010815    MBY80018.1    GGMR01000407    MBY13026.1    ABLF02022040    ABLF02056888    GEZM01086715    JAV59020.1    GGMR01000961    MBY13580.1    GGMR01014230    MBY26849.1    GEHC01000939    JAV46706.1    LBMM01016286    KMQ84479.1    LBMM01016285    KMQ84480.1    LBMM01012240    KMQ86333.1    JXUM01113346    KQ565681    KXJ70776.1    GGMR01015704    MBY28323.1    GGMS01005792    MBY74995.1    GEHC01000894    JAV46751.1    ABLF02042264    GEHC01000864    JAV46781.1    ABLF02016109    ABLF02016113    AAZX01023505    GGFJ01000364    MBW49505.1    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    ABLF02004142    JXUM01030959    KQ560903    KXJ80414.1    ABLF02011447    ABLF02011449    ABLF02058523    GEHC01000898    JAV46747.1    GGMR01020322    MBY32941.1    NWSH01006923    PCG63188.1    ABLF02023723    GFTR01008874    JAW07552.1    GL769615    EFZ10365.1    LBMM01010417    KMQ87475.1    ABLF02041863    GEHC01000870    JAV46775.1    LBMM01009551    KMQ88039.1    ABLF02003232    ABLF02003233    ABLF02022909    ABLF02042631    PCG63186.1    ABLF02006088    ABLF02006089    ABLF02023600    ABLF02041631    ABLF02018588    ABLF02018590    ABLF02042430    GEHC01000865    JAV46780.1    LNIX01000036    OXA39969.1    ABLF02023842    ABLF02028949    ABLF02058391    KK114194    KFM61875.1    AAZX01023184    KQ973442    KXZ75531.1    ABLF02014076    GGMR01020500    MBY33119.1    LBMM01006539    KMQ90520.1    ABLF02022912    ABLF02038819    ABLF02051942    ABLF02060282    LBMM01009964    KMQ87756.1    LNIX01000011    OXA48901.1    GGMR01000448    MBY13067.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000283053    UP000007819    UP000036403    + More
UP000069940    UP000249989    UP000002358    UP000095301    UP000198287    UP000079169    UP000054359    UP000007266   

Pfam

PF03564   DUF1759        + More
PF18701   DUF5641
PF05380   Peptidase_A17
PF05585   DUF1758
PF17921   Integrase_H2C2
PF00665   rve
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH

Interpro

IPR036397   RNaseH_sf        + More
IPR005312   DUF1759       
IPR040676   DUF5641       
IPR008737   Peptidase_asp_put       
IPR001878   Znf_CCHC       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR021109   Peptidase_aspartic_dom_sf       
IPR041588   Integrase_H2C2       
IPR001995   Peptidase_A2_cat       
IPR000477   RT_dom       
IPR001969   Aspartic_peptidase_AS       
IPR001606   ARID_dom       
IPR041373   RT_RNaseH       
IPR041577   RT_RNaseH_2       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A2A4JBY8   A0A2A4JM97   A0A0N0PBK0   A0A194QJ48   A0A0N1IPF2   A0A3S2N9P3   + More
A0A194RI04   A0A0N1IBH6   A0A194RAG7   A0A194RGQ8   A0A023F0J1   A0A1Y1MTT1   A0A1Y1N4T1   A0A023EZB2   A0A023EZC2   A0A2A4JL65   V5GXV6   V5GU69   W8ANH7   A0A1Y1LAD7   A0A2S2PNZ4   A0A2S2NCU7   A0A1Y1L369   J9K169   X1WN86   A0A0J7KD64   A0A2S2NLW5   A0A2S2Q6Z5   A0A2S2PCB8   A0A2S2PLU2   W4VR47   A0A1Y1N3M1   A0A0P6J6G2   A0A0P6K153   A0A2S2P9U8   X1WNM7   A0A1Y1MY22   A0A1Y1MYB7   A0A2S2PKV3   A0A2S2P1P0   A0A2S2QQM0   A0A2S2N8B4   J9LHB7   A0A1Y1KFT0   A0A2S2N8W8   A0A2S2PBM2   A0A1W7R6B7   A0A0J7K2F3   A0A0J7MVH5   A0A0J7K765   A0A182H647   A0A2S2PFV9   A0A2S2QB76   A0A1W7R6J2   J9KCB6   A0A1W7R6L7   J9LYM7   K7J7V9   A0A2M4B8V6   J9KLD6   J9LVB4   A0A182HA33   J9LH75   A0A1W7R6F4   A0A2S2PTX9   A0A2A4IUY1   J9K774   A0A224XG39   E9J9Y8   A0A0J7N465   X1WL76   A0A1W7R6S6   A0A0J7KCR4   J9JWX5   X1WWR0   A0A2A4IUL3   A0A1I8M1N7   J9K3V8   X1WVK5   J9KBH1   A0A1W7R6N3   A0A226D417   A0A1S3DJJ8   J9JT64   A0A087T9T6   K7JBZ1   A0A139W8E1   K7JBZ2   A0A1S3DIE2   A0A3Q0JDB5   A0A1S3DHZ9   X1XU20   A0A2S2PUJ2   A0A3Q0JI79   A0A0J7ND98   X1XTY9   A0A0J7KBZ0   A0A226DW31   A0A2S2N7B6  

KEGG

NA   

GO

GO:0015074   GO:0008270   GO:0003676   GO:0004190   GO:0016021   GO:0003677  

Length:

734

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.05047

Exp number, first 60 AAs:

0.00061

Total prob of N-in:

0.01920

outside

1  -  734

 

 

Pi

350.011599

Theta

202.324637

Tajima's D

2.258236

CLR

0.108168

CSRT

0.917154142292885

Interpretation

Uncertain