SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14278  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008154
Annotation
PREDICTED:_dynamin-like_120_kDa_protein?_mitochondrial_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.15
 

Sequence

CDS
ATGTCCAGAATACTACATAATCGTGTAAGATCATCATTTAAGAACACATCATGGGTCAGCATCGACAAACGAGCAGTAGCATTCTCAATATGGACTGGACGTAGCATGCTACTGTACAAACCAATAGATACGAGCCATGTGCAGAGAAGATGCTATGGTATGCTTGTTGCAAGGGCTATTAGAGGAGTGTTGAAAATTCGTTACTTAGTTCTCGGTGGTGCCGTTGGTGGAGGCATGACGTTGAATAAGAAATATGCCGAGTGGAAGGATGGTCTTCCAGATATGGGCTGGTTAAATGACCTGCTCCCCGACAATGAACAATGGGATAGATTTACAACTACACTGATTACAGCAAAAGATAAAATCGGTGATCAATTGCAGATTGATCCACGACTCCGTGAAGCTGGTGTTGCCAGGACCACCGAGCTGCGCGAGTGGTTAGCTCAGAGGTACGAAGATGCCGTGGCGGCCGCAGCCGTTAACAATCAACAACGATTAGTGTATTGTTCAGAGCCGGCTCCGAAGATAGTGAACAACCTCCAGAGCAGGCCCGCGTCGCCGCCGCCCGCGCGCTCCGCCGACGACGCCGCGCACTACGGTGAGTCCGCGACTTGCTCACATTTCTATGTCACTCAGTTTACCCGGGTGTATCCGTAG
Protein
MSRILHNRVRSSFKNTSWVSIDKRAVAFSIWTGRSMLLYKPIDTSHVQRRCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWKDGLPDMGWLNDLLPDNEQWDRFTTTLITAKDKIGDQLQIDPRLREAGVARTTELREWLAQRYEDAVAAAAVNNQQRLVYCSEPAPKIVNNLQSRPASPPPARSADDAAHYGESATCSHFYVTQFTRVYP

Summary

Similarity
Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
Pfam
PF00350   Dynamin_N        + More
PF05585   DUF1758
Interpro
IPR022812   Dynamin_SF        + More
IPR001401   Dynamin_GTPase       
IPR033047   Opa1       
IPR008737   Peptidase_asp_put       
IPR027417   P-loop_NTPase       
IPR030381   G_DYNAMIN_dom       
SUPFAM
SSF52540   SSF52540       

Ontologies

Topology

Length:
218
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.31837
Exp number, first 60 AAs:
0.24766
Total prob of N-in:
0.34438
outside
1  -  218
 
 

Population Genetic Test Statistics

Pi
26.86408
Theta
22.423575
Tajima's D
0.556495
CLR
0.640893
CSRT
0.535923203839808
Interpretation
Uncertain
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