SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14277  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008154
Annotation
PREDICTED:_dynamin-like_120_kDa_protein?_mitochondrial_isoform_X2_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.341
 

Sequence

CDS
ATGATGAAGAAACGTGTCCACGCCTTGCAAGAGGAAGTACTGGCTCTACAGGCGCGCTACCAGAGGGAGTTGCAGCGGCTAGAACAAGAGAACAGAGAGCTGAGGCAGCAGAACATGCTGCTGAAACAAGGCAGGCAACCTTCCACTAAGAAGATGAAGCGGTCACTGATCGACATGTACTCGTCCGTGCTGGACGAGCTGGCGGGCTGGGAGGCGGACGGCGCGGACCGGCTGCCGCGGGTGGTGGTGGTGGGCGACCAGTCCGCCGGCAAGACCTCCGTGCTGGAGATGATCGCGCAGGCCAGGATCTTCCCGCGCGGCGCTGGCGAGATGTGCACCAGAGCCCCGGTGAAGGTGACGCTGTCCGAGGGCCCGTACCACGTAGCGCAGTTCAGGGACTCCTCCAGAGAGTTTGATCTCAATAAGGAATCAGATTTAGCTGACTTAAGGAAGGAGGTGGAGCTGCGCATGCGCAACAGCGTGCGCGGCGGCCGCACGGTCTCGTCGGACGTCATCTCGATGTCGGTGAAGGGGCCCGGCCTGCACCGGATGGTGCTGGTGGACCTGCCCGGAGTCATCTCGACTCAAACCGTGGACATGGCGGCGGACACTCGCGAGGCCATCAAGCAGATGACCAGACAGTACATGGACAACCCCAACGCCATCATCCTGTGCATCCAGGACGGGTCAGTGGACGCAGAGCGCAGCAACGTGACCGACCTGGTGTCCTCCTGTGACCCACAGGGGAAACGAACGATCTTCGTGCTCACCAAGGTGGATCTGGCCGAAGAGAACCTCGCCAATCCGAACCGGATCCGCCGCATCCTGGAGGGCAAGCTGTTCCCGATGAAGGCGCTGGGCTACTACGCCGTGGTGACGGGCCGCTCGCGCCGGGACGACTCCATCCAGGGCATCAGGGAGTACGAGGAGAGATTCTTCAGCTCCTCGAAACTATTCAAGAATGGTCTGGTGACCCCATCGCAGGTGACCACCAGGAACCTGTCGCTGGCCGTCGCCGAGTGCTTCTGGAGGATGGTGCGCGCGACCGTCGAGCAGCAAGCCGACGCCTTCAAAGCCATGAGGTTCAACCTGGAGACCGAATGGAAGAACACGTTCCCGAGGCAGCGCGAGCTGGACCGCGACGAGCTGTTCGAGCGCGCGCGCGCCGAGCTGCTGGACCAGGCCGCCGAGCTGTCGGCCGTGCCCGCCCAGCGCTGGGAGCACGCGCTGCGGGACGCGCTGTGGGACCACGCCGCGCCCACCGTCATGGACCGCATCTACCTGCCCGCCGCCGCCGCCGCGCACGACGATCAAGACAAGTTTAACACGATAGTGGACATAAAGCTGCGCGAGTGGGCGGAGCGCGAGCTGCCCGGCACGTCGGTGCAGGCCGGGCGGGAGGCCCTGCGCGCCGAGTTCTCGCGCCTCACGGAGCCCGCGGAGCCCGAGCCGCTGTTCCGCGGGCTGCGCGAGCACGCCGTGCGCGAGGCGCTGCTGCGGCACGACTGGGAGGAGCGCGCGCAGGACGTGCTGCGCGTGCTGCAGCTGAACGCGCTGCAGGACCGCTGCGTGAGCGCGCGCGCGCACTGGGACCGCGCCGTGGCGCTGCTGGAGGCCGCGCTGGGGGACCGCCTGGGGGCCGCGCGGGACCGTCTGCGGGACCTCACCGGTCCGGGATGGCGGGAGCGCTGGCTGTCTTGGAGCAGCCCCACGGAGGAGCAGCGGCGCCGCGCCCTGCTGGCCGCCGAGCTGGAGCAGCTGGGCACCGCGCGCCCGCAGCTCACGTACGACGAGGTGGTGGCCGTGCGGGACAACCTGCGCCGGCAGGGCGTGGAGGTGGACAACGACTACATCAGGGAGACGTGGAAGCCGCTGTACCTGAGGAAGTTCTTGGAGCAGGCACTGACCCGCGCCCGGGACTGCAGGAAGAGCTTCTACTTGTACAGCCAACAGAACGGCGCCGGGAAGGAGTGTTGCGAGGTGGTGCTGTTCTGGCGCATCCAGCAGACCCTGGAGACCACGGCCAACGCTCTGCGACAGCAGATCGGGAACCGGGAGGCCGCCAGGCTCGACAGGGAGCTGCGGGAAGTGCTCGATGAGATGGCGGCCGACGCGGACCTCAAGAAGCAGCTGCTGTCCGGCAGGCGGGTGGAGCTCGCAGAGGAACTAAAACGAGTGCGGAAAGTACAAGAGAAATTAGAGGAATTTATCGAAGCACTTAACAAAGAAAAGTAG
Protein
MMKKRVHALQEEVLALQARYQRELQRLEQENRELRQQNMLLKQGRQPSTKKMKRSLIDMYSSVLDELAGWEADGADRLPRVVVVGDQSAGKTSVLEMIAQARIFPRGAGEMCTRAPVKVTLSEGPYHVAQFRDSSREFDLNKESDLADLRKEVELRMRNSVRGGRTVSSDVISMSVKGPGLHRMVLVDLPGVISTQTVDMAADTREAIKQMTRQYMDNPNAIILCIQDGSVDAERSNVTDLVSSCDPQGKRTIFVLTKVDLAEENLANPNRIRRILEGKLFPMKALGYYAVVTGRSRRDDSIQGIREYEERFFSSSKLFKNGLVTPSQVTTRNLSLAVAECFWRMVRATVEQQADAFKAMRFNLETEWKNTFPRQRELDRDELFERARAELLDQAAELSAVPAQRWEHALRDALWDHAAPTVMDRIYLPAAAAAHDDQDKFNTIVDIKLREWAERELPGTSVQAGREALRAEFSRLTEPAEPEPLFRGLREHAVREALLRHDWEERAQDVLRVLQLNALQDRCVSARAHWDRAVALLEAALGDRLGAARDRLRDLTGPGWRERWLSWSSPTEEQRRRALLAAELEQLGTARPQLTYDEVVAVRDNLRRQGVEVDNDYIRETWKPLYLRKFLEQALTRARDCRKSFYLYSQQNGAGKECCEVVLFWRIQQTLETTANALRQQIGNREAARLDRELREVLDEMAADADLKKQLLSGRRVELAEELKRVRKVQEKLEEFIEALNKEK

Summary

Similarity
Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
EMBL
KZ150293    PZC71568.1    KQ459386    KPJ01229.1    GEZM01061523    JAV70414.1    + More
GEZM01061521    JAV70416.1    GEZM01061522    JAV70415.1    AAZX01005171    KZ288280    PBC29665.1    KQ971342    EFA02998.2    NEVH01014835    PNF27603.1    KYB27693.1    NNAY01000869    OXU26134.1    QOIP01000013    RLU15539.1    KK107467    EZA50265.1    PNF27607.1    PNF27606.1    PNF27604.1    PNF27608.1    GL888840    EGI57608.1    GL440100    EFN66259.1    KQ981645    KYN38678.1    ADTU01020949    JXUM01127563    KQ567205    KXJ69556.1    JXUM01127004    KQ567136    KXJ69605.1    CH477283    EAT44850.1    GGFK01006424    MBW39745.1    GBYB01000170    JAG69937.1    AXCN02001792    GGFK01005795    MBW39116.1    GGFK01005773    MBW39094.1    ATLV01011135    KE524643    KFB35872.1    AAAB01008816    EAA05165.3    GGFK01005468    MBW38789.1    GGFK01005464    MBW38785.1    ADMH02000297    ETN67071.1    GANO01002295    JAB57576.1    GL762535    EFZ21270.1    GGFJ01001496    MBW50637.1    GGFJ01001451    MBW50592.1    GGFM01002196    MBW22947.1    GGFM01007172    MBW27923.1    APCN01004510    AXCM01005991    GBYB01005372    JAG75139.1    KQ414618    KOC67899.1    KQ435798    KOX73411.1    KQ761208    OAD57986.1    ODYU01008117    SOQ51444.1    GEZM01061520    JAV70418.1    GFDL01000766    JAV34279.1    GFDL01000795    JAV34250.1    GL448138    EFN85268.1    GFDL01002654    JAV32391.1    UFQT01000292    SSX22907.1    SSX22908.1    GDRN01108071    JAI57320.1    GDRN01108074    GDRN01108073    JAI57317.1    LBMM01000366    KMQ99191.1    JRES01000644    KNC29665.1    AJWK01011531    GFDF01002017    JAV12067.1    GFDF01002016    JAV12068.1    GFDF01002000    JAV12084.1    GFDF01002001    JAV12083.1    KQ978344    KYM94968.1    DS235830    EEB18045.1    GBXI01013561    JAD00731.1    GBXI01006866    JAD07426.1    GDHF01029054    GDHF01014217    JAI23260.1    JAI38097.1    GAMC01007022    JAB99533.1    GAMC01007021    JAB99534.1    GDHF01009830    GDHF01008884    JAI42484.1    JAI43430.1    GAKP01008192    JAC50760.1    GAKP01008193    JAC50759.1    GDHF01031661    JAI20653.1    LRGB01000930    KZS14950.1    CH933808    KRG04598.1    GDHF01019039    JAI33275.1    GDIQ01033157    JAN61580.1    ACPB03000857    GDIP01039696    JAM64019.1    GL732527    EFX87719.1    KQ980928    KYN11370.1   
Pfam
PF00350   Dynamin_N
Interpro
IPR027417   P-loop_NTPase        + More
IPR030381   G_DYNAMIN_dom       
IPR033047   Opa1       
IPR001401   Dynamin_GTPase       
IPR022812   Dynamin_SF       
SUPFAM
SSF52540   SSF52540       
PDB
6DI7     E-value=9.98283e-27,     Score=301

Ontologies

Topology

Length:
744
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0043
Exp number, first 60 AAs:
6e-05
Total prob of N-in:
0.00066
outside
1  -  744
 
 

Population Genetic Test Statistics

Pi
360.337623
Theta
211.316776
Tajima's D
2.519566
CLR
0.062996
CSRT
0.946902654867257
Interpretation
Uncertain
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