SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14262
Annotation
PREDICTED:_uncharacterized_protein_LOC101742772_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr24(+):96156-167383      View in EpiBrowser
Location in the cell
Mitochondrial   Reliability : 1.225 Nuclear   Reliability : 1.079
 

Sequence

CDS
ATGCTGCGCTCCCACCGGCCTCCCGCTCCTCTGCGAACGTGCACTCTCTTCCATGCACTCTTCTTCTTTACACTCTTCCTAGATCTCCCCTTCGCCAGAACAGACTGGAGTTCAGAAAGCTCCTCTTCCCCCGCGTCCCCTTCACCTGAACTGGACGCGGAGCTAGTCCGAGACGCACCCCTCTACCCCCCACTCCGCGACACTAACGAAATTGAGCTCCCTTACAACGACGTAGAAACCAGCATCGAAAGAGACCTAGTCACCCCCGACGAGACTGAACGCGTAATCAAGATACAAAACGAAGAGAACGGAGAAAGAGATAAGAGAAGTACCGGACAGGAGTGGGACAGAACTAAGACTACGAGTCGTCGTGTTAAAACCGGGGACACGATTCTAAACATCCGCGGTGCTGTCCGGGACGCCATTGGAGACGCCGGAGCTGCCCCCGGGCCACGGGCTTCGTCCCGACTGGACACGTTCGTCATACGCCCGGCGCAACAACACCGGCCGCCCATGCACGACCAGCCTAGAGTACAACCTTCGACCAGTCAAGTACCGAAGTATGACCGGGAGCTAGTGGTGGAGGCTCACGCCCGCGCCGCGATACCGTGCGACCTCCTGAACGTCACCAGCGTGAGGTGGTACAAGGATAACGAGCAAATGAACCTGCCCTCATCGAGCGGTGGGGGAGAAGCAATATGGAAGGAAGCCGACACAGCCGTGGTAGGACGAGCCACACGAGGAGACGCCGGCAACTGGCGCTGTGCTGGAGTTGATAAAGCCGGCAAGACCATTGCTGGGAAACCGACCAGGCTGCTCATCTATGAGCCGGTGCGGTCGGTGTACCTAGCTGTGGACGGGCGGAGACTCGACGCGGGGAACACCTGGGTGCCGGTCCGGGACAAGACCGAGCTGGAGGTGCGGTGTGTCGCTGAGGGTGGAGCTCCTCCGCCGGAATTGTCGTGGAGGCTGATAGCGCTGGAGCCAACGTTGGACCATCGACCGTATCTGAGGATACATCACACTAATTACTCTATCGAGGGCGTGTCGGTGTCACATGCGGCCGTTACAGCAGCACGCGAATTACATAATGCAACTCTCCAGTGCGAAGCGAAGCAACGGAAGCCAAACCTGCCTGCCTCTATAGAACCCACAGCCTCCCACGACGTGCAGACCGCTAAACTAGAGATACACGTCACTTATCCTCCATCATTCGTGATATCTCGCTGGCCTGGTTTTGGAGTATCACTATCAGCTGGAGGAGCGGCCGCATTGAGATGTGACGTCGACGCCAACCCGCCGGCCAGAGCGTGGTGGCAAAGGGACGATGCCAGTCCCACAAGCTCCCCCCCTGCAGAGGAGGGTGGTGATGCAGGTGTGGGCGCGGCCACACTCCGCTGGCAGACCCTCCGCGCCGCACATGCGGGCTGGTACCGGTGCAGGGCGACCTGGCTCGACACGGACTACTCCTCCATCGGGTACTACCTCAACGTGCTCTCTCCCGAGGAAAACACAGAACCAGTAACGGAGCCTGAAGAAGTCGAAGAGGAGCCAGATCATCAAAAAGTAGAGGTGGCTCTCGGTGGAAACGTGCAGTTACATTGCCCCAAAGGTAGTGTTGGGTGCTGGTGGCGGCGTGTGGTCGGCAACTCCAGTGAGAGCTGGGCGCCGGCCGGCTCCCACCACGCGCACGGAGTGCTCGGTATAAAGGAAGCGTTGTACCAGGAGGGAGGGGAGTACCGGTGCGTCGGTGCGCGGGCGCCTGATCTCATGCGGCTTCGAGAGCTGAAGAGGGTCACGCTCAGGGTTACCGGCGGCGCGACGGCCACGGCTCTGAGCGCGGAGCCGGCGCGCGGGGGCTGGCGGCTGGAGTGCGGCGCGTGCGGACGGGCGCTCCGCGTGCTGTGGCTGCGGCGCGGGGTCACCGCCCCCGCCGACCTGCTGCCGGACCTCGCCCAGCACTGCTGGAGAGCCGTGCTACACGTCACCGAGCCTGATGAGGTATGGTGCATAGCGGTAGGGGGGAGCGGGGGCGGCGGGTCGGTGGCGGTGTTCCCGCGTCGCGCCCCGCATCCCTCCCCCGCGCCCGCCCGCCACACCGTGCGAGCTCTGTACAACAACGCACATCGCAATCTACCCACCCTATTCCTTATATTCATACTAACACTCGTTTACCAATTGAAAAGCCGTATATAA
Protein
MLRSHRPPAPLRTCTLFHALFFFTLFLDLPFARTDWSSESSSSPASPSPELDAELVRDAPLYPPLRDTNEIELPYNDVETSIERDLVTPDETERVIKIQNEENGERDKRSTGQEWDRTKTTSRRVKTGDTILNIRGAVRDAIGDAGAAPGPRASSRLDTFVIRPAQQHRPPMHDQPRVQPSTSQVPKYDRELVVEAHARAAIPCDLLNVTSVRWYKDNEQMNLPSSSGGGEAIWKEADTAVVGRATRGDAGNWRCAGVDKAGKTIAGKPTRLLIYEPVRSVYLAVDGRRLDAGNTWVPVRDKTELEVRCVAEGGAPPPELSWRLIALEPTLDHRPYLRIHHTNYSIEGVSVSHAAVTAARELHNATLQCEAKQRKPNLPASIEPTASHDVQTAKLEIHVTYPPSFVISRWPGFGVSLSAGGAAALRCDVDANPPARAWWQRDDASPTSSPPAEEGGDAGVGAATLRWQTLRAAHAGWYRCRATWLDTDYSSIGYYLNVLSPEENTEPVTEPEEVEEEPDHQKVEVALGGNVQLHCPKGSVGCWWRRVVGNSSESWAPAGSHHAHGVLGIKEALYQEGGEYRCVGARAPDLMRLRELKRVTLRVTGGATATALSAEPARGGWRLECGACGRALRVLWLRRGVTAPADLLPDLAQHCWRAVLHVTEPDEVWCIAVGGSGGGGSVAVFPRRAPHPSPAPARHTVRALYNNAHRNLPTLFLIFILTLVYQLKSRI

Summary

Uniprot
A0A3S2PH55   A0A2H1VXE2   A0A212EUM1   A0A0N1IA44   A0A1B0G7L1  
Pubmed
22118469    26354079   
EMBL
RSAL01000035    RVE51308.1    ODYU01005034    SOQ45517.1    AGBW02012344    OWR45183.1    + More
KQ460423    KPJ14815.1    CCAG010016881    CCAG010016882    CCAG010016883   
Proteomes
UP000283053    UP000007151    UP000053240    UP000092444   
Pfam
PF08205   C2-set_2
Interpro
IPR007110   Ig-like_dom        + More
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR003598   Ig_sub2       
IPR013162   CD80_C2-set       
SUPFAM
SSF48726   SSF48726       
Gene 3D
2.60.40.10    
ProteinModelPortal
A0A3S2PH55   A0A2H1VXE2   A0A212EUM1   A0A0N1IA44   A0A1B0G7L1  

Ontologies

KEGG
101742772    no KO assigned | (RefSeq) uncharacterized LOC101742772
GO
GO:0016021   GO:0005515   GO:0004523   GO:0031461   GO:0016791   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Topology

SignalP
Position:   1 - 34,         Likelihood:  0.786703
 
 
Length:
731
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
8.70822999999999
Exp number, first 60 AAs:
4.05226
Total prob of N-in:
0.20417
outside
1  -  731
 
 

Population Genetic Test Statistics

Pi
310.683956
Theta
199.405996
Tajima's D
1.13231
CLR
0.432254
CSRT
0.691865406729664
Interpretation
Uncertain
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