Gene

KWMTBOMO14260  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008165

Annotation

30K_protein_19_[Bombyx_mori]

Location

Bomo_Chr24(+):72716-74080      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.454

CDS

ATGATGGATCCACAGGACAAGCTCCCCAACTACGTGACCAACGTGGACCTGAAGTATCCGTACTCAGACCTGCCGTACATAGGGCAGTACAAGCTGCTCAAGCTCCCCTTCACTGGAAAGCTGATCGAGCATGTTGACTACTGGGGCGAGGGGAGTATCGTCAACGGGGGACTGTATTCGGGCTTCCGCAACTGCTACAACGTGAACCGACAGTACCAAGAGGTCAGCAACGGGCCCGACATGGGTCGCAAGATCCCCAACAGGATCCCGGTGCGCGACGAAAACGACTGCGACACCCGGGCTTACATCAAGGATGACTCGGTCAAAATAGTGACGCTCATGAGCGCGCCCATCATTCCGAACAGCGCCAGAGACATTACGAGAATCGTTAACGAGCGCGTCGGCATGGTCGTCATCTACGGCATGCCGGTAGAGTCTCAGGGTATTAAGCTCCTGGCTGCCGAGCTAAAGAGCAAGCTTCTGCTGTACTGTCCCGACTACGAGCTGCCCGATTACTTACAGGAACCTACAATGATGGACTCGCACGTGGCTTTCCTCAACAAGCAACTTCTTATGGATCTGCTTTTCAAGTGCGTGTCGACCGGGGACTACGACAAGGCAGTGACTATCACGAAGTCATTGCAAGATGATAACGTCGGTTTTATGATCGAGGAGCTGATCGACAGACTCTTGCGCGCACGAGAACCTAACGTGTTCGCATACGCGGACAAGTTGTGGTCCGCCGGACACCACGATATAGTCAATGACTTTTTCCCTTCGGAAATCAAATTGATCACCAAGCAAGAAAGGGTGAAAATCATCGGAAGATATTACAATCAAGCTCTGAAGCTGGACTCCAATGTCGACTCGTACAACAACCGCCTGGCCTGGGGAGACAGCAAGGACAAGATTAGTCACAGAGTGAGCTGGAAGTTTATCCCGGTATGGGAGAATAACAAGCTGCTGTATAAAATATTGAATACTGAATATACTATGTACCTGAAGCTGGACATGAACGTAGAAGAGTACGGAGACAGGAAAGCGTGGGGTTCCAACAACTCGAACGAGAAAGGCCATCTGTGGAAGCTGACGCCTGTAGTGCTGGAGACCGGCAACGTCTTACTCATAGAGAACCACGAGTACGGGCAGAGTCTGAAGCTGGACGCGCACGTGGACAGCTACGGCGACCGCCTGCTCTGGGGAAACAATGGAAACGTCGATGGTAATCCTGGGTACTTCGGCTGGGTCATCAACGCGTGGCAGTAG

Protein

MMDPQDKLPNYVTNVDLKYPYSDLPYIGQYKLLKLPFTGKLIEHVDYWGEGSIVNGGLYSGFRNCYNVNRQYQEVSNGPDMGRKIPNRIPVRDENDCDTRAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGMPVESQGIKLLAAELKSKLLLYCPDYELPDYLQEPTMMDSHVAFLNKQLLMDLLFKCVSTGDYDKAVTITKSLQDDNVGFMIEELIDRLLRAREPNVFAYADKLWSAGHHDIVNDFFPSEIKLITKQERVKIIGRYYNQALKLDSNVDSYNNRLAWGDSKDKISHRVSWKFIPVWENNKLLYKILNTEYTMYLKLDMNVEEYGDRKAWGSNNSNEKGHLWKLTPVVLETGNVLLIENHEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWVINAWQ

Uniprot

H9JF68   B5BSX5   H9B451   H9JL03   H9JJ72   H9B460   + More
H9JMX4   H9B455   Q2PQU4   H9B445   H9B447   H9JJC0   A0A2W1BPF5   A0A2A4IYY5   A0A194QYV5   A0A194Q636   Q76IB6   A0A2H1WST8   A0A2W1BV38   A0A2A4K904   A0A3G1LBD4   A0A2A4JTT3   A0A385HW64   A0A2W1BZD4   A0A3G1LBE0   A0A2T4HWM7   A0A1T3FC56  

Pubmed

19121390    26078299    18840462    17112968    28756777    26354079    + More
12871935    29175381   

EMBL

BABH01026782    JN977537    AFC87817.1    AB436163    BAG70410.1    JN977536    + More
AFC87816.1    BABH01011413    BABH01036437    JN977545    AFC87825.1    BABH01028980    JN977540    AFC87820.1    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01028979    JN977530    AFC87810.1    BABH01026781    JN977532    AFC87812.1    JN977541    AFC87821.1    KZ149940    PZC76929.1    NWSH01005147    PCG64400.1    KQ460930    KPJ10718.1    KQ459582    KPI98870.1    AB098260    BAC82630.1    ODYU01010790    SOQ56108.1    KZ149893    PZC78918.1    NWSH01000017    PCG80765.1    MF497269    AUB45121.1    NWSH01000685    PCG74802.1    MG799571    AXY55009.1    PZC78944.1    MF497270    AUB45122.1    PJNJ01000010    PTD20097.1    MAIC01000014    OPB75435.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000241377    UP000190816    + More

PRIDE

H9JF68    B5BSX5    H9B451    H9JL03    H9JJ72    H9B460    + More
H9JMX4    H9B455    Q2PQU4    H9B445    H9B447    H9JJC0   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9JF68   B5BSX5   H9B451   H9JL03   H9JJ72   H9B460   + More
H9JMX4   H9B455   Q2PQU4   H9B445   H9B447   H9JJC0   A0A2W1BPF5   A0A2A4IYY5   A0A194QYV5   A0A194Q636   Q76IB6   A0A2H1WST8   A0A2W1BV38   A0A2A4K904   A0A3G1LBD4   A0A2A4JTT3   A0A385HW64   A0A2W1BZD4   A0A3G1LBE0   A0A2T4HWM7   A0A1T3FC56  

PDB

3PUB     E-value=8.05312e-41,     Score=420

KEGG

100188965    no KO assigned | (RefSeq) Ppbp2; paralytic peptide binding protein 2

GO

GO:0005576  

Length:

421

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01207

Exp number, first 60 AAs:

0.00178

Total prob of N-in:

0.00490

outside

1  -  421

 

 

Pi

86.623741

Theta

97.429828

Tajima's D

-0.347674

CLR

1.700969

CSRT

0.273586320683966

Interpretation

Uncertain