Gene

KWMTBOMO14258  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008164

Annotation

low_molecular_mass_30_kDa_lipoprotein_19G1-like_[Bombyx_mori]

Location

Bomo_Chr24(+):66076-67714      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.679 Extracellular   Reliability : 1.105

CDS

ATGCTAACTAGCTCCAGCCCTTCACAGGTAAAAACACCGTCAGAGGCAGAATGGGAAGCCGCCTCTGAGCCAGACTACGACACAAATGAGGACCTGTTGTATGCGTACTCCCCAATACCCTACTTCGGTATGTACCACCTCGTGAAGATCCCGATCGACAGAGGGCTGGTACACCAAGTCGATTACTGGGGAGAAGGAAAAGTGACTAACCTTGACAAGATAAGAGGCTTCCCTCGGAGCTACAATGTGAACGAACAGTTTGCGCTCGTCAGTAAGGGCCACAACGAGGGAAAGCAAATACCCAACAGGATCCCCGTCGTGTCCGTGGACGACAGCGACACTTCCAGTTACATCAGAGACGGCAGCGTCAAAACTGTTACCATCAGCACGGGGCCGATCACTAAGCGTTGCGCTGCAGACGTCGCCAGGATTGTCAACGCGTCCGAAGGACTCGTCGTTGCCTACGGATATTCTGACAATTCTGACGACATCCAAAATCTCGAGCGTGAGCTTGGCAAAAACGGCTTATACTATGGAGCCGGGTACGAACTACCCGCAGACTTGAAGACCCAGACGGCATTCAGCACGAAGATGGTCTTTGCCGACGCAACGTCAATCAACAATCACTTGTACGACTTGGTTACGGGCGGCGACTACATCAACGCGGTGAAGACTGTGCGCAGTCTCGTCGACAACCAGGGCTCCGACGTCTGTCGCGACGTCGTCTCGCGGCTCGTCTCGCAGGGCATCAAGAACACCATGTCGTTCGCGTACAAGCTGTGGCACGAGGGCCACAAGGACATCGTCGAAGATTACTTCCCGAGCGAATTCCAACTCATACTCGACCAACAGATAATTAAGCTCATCGGCAAACATTACAATCAAGCTCTCAAACTGGATGCTAACGTTGGCGAGTACAACGACCGCCTAACCTGGGGAGACGGAAAAGACTACACCAGCCACCATGTCAGCTGGCGACTCATCTCTCTTTGGGAAAACAACAACGTGATATTCAAGATACTGAACACCGAATACGAGATGTACTTGAAACTGGACGTGAACGTGGATAGTTACGGCGACAGGAAGACCTGGGGATCGAACGGTTCCAGTGAGAAGAGACACACCTGGTCTTTATACCCGGTAAAGGTGGGAGACCAACAGCTGTTCCTCATCGAGAACCGGGAGTACCGGCAGGGACTGAAGCTGGACGCGAACGTGGACTCATACGGGGACCGCCTTGTGTGGGGGAGCAACGGGACAGTCGCCGACAACCCCGAGTACTACGGCTTCATAATCCAGCCGTGGCAGTGA

Protein

MLTSSSPSQVKTPSEAEWEAASEPDYDTNEDLLYAYSPIPYFGMYHLVKIPIDRGLVHQVDYWGEGKVTNLDKIRGFPRSYNVNEQFALVSKGHNEGKQIPNRIPVVSVDDSDTSSYIRDGSVKTVTISTGPITKRCAADVARIVNASEGLVVAYGYSDNSDDIQNLERELGKNGLYYGAGYELPADLKTQTAFSTKMVFADATSINNHLYDLVTGGDYINAVKTVRSLVDNQGSDVCRDVVSRLVSQGIKNTMSFAYKLWHEGHKDIVEDYFPSEFQLILDQQIIKLIGKHYNQALKLDANVGEYNDRLTWGDGKDYTSHHVSWRLISLWENNNVIFKILNTEYEMYLKLDVNVDSYGDRKTWGSNGSSEKRHTWSLYPVKVGDQQLFLIENREYRQGLKLDANVDSYGDRLVWGSNGTVADNPEYYGFIIQPWQ

Uniprot

H9B447   H9B445   Q2PQU4   H9JJC0   H9B451   B5BSX5   + More
H9JF68   H9JL03   H9JJ72   A0A194QYV5   A0A2A4IYY5   A0A2W1BPF5   A0A194Q636   A0A385HW64   Q76IB6   A0A3G1LBE0   A0A3G1LBD4   A0A2A4K904   A0A2W1BZD4   A0A2A4JTT3   A0A2W1BV38   A0A2H1WST8   H9JMX4   H9B460   H9B455   A0A2T4HWM7   A0A1T3FC56  

Pubmed

19121390    26078299    17112968    18840462    26354079    28756777    + More
12871935    29175381   

EMBL

BABH01026781    JN977532    AFC87812.1    BABH01028979    JN977530    AFC87810.1    + More
BABH01011413    DQ306881    JN977531    ABC18268.1    AFC87811.1    BABH01036437    JN977541    AFC87821.1    JN977536    AFC87816.1    AB436163    BAG70410.1    BABH01026782    JN977537    AFC87817.1    KQ460930    KPJ10718.1    NWSH01005147    PCG64400.1    KZ149940    PZC76929.1    KQ459582    KPI98870.1    MG799571    AXY55009.1    AB098260    BAC82630.1    MF497270    AUB45122.1    MF497269    AUB45121.1    NWSH01000017    PCG80765.1    KZ149893    PZC78944.1    NWSH01000685    PCG74802.1    PZC78918.1    ODYU01010790    SOQ56108.1    BABH01028980    JN977545    AFC87825.1    JN977540    AFC87820.1    PJNJ01000010    PTD20097.1    MAIC01000014    OPB75435.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000241377    UP000190816    + More

PRIDE

H9B447    H9B445    Q2PQU4    H9JJC0    H9B451    B5BSX5    + More
H9JF68    H9JL03    H9JJ72    H9JMX4    H9B460    H9B455   

Pfam

PF03260   Lipoprotein_11

Interpro

IPR004943   Lipoprotein_11        + More
IPR042046   Lipoprotein_11_N       

Gene 3D

1.10.10.2400    

ProteinModelPortal

H9B447   H9B445   Q2PQU4   H9JJC0   H9B451   B5BSX5   + More
H9JF68   H9JL03   H9JJ72   A0A194QYV5   A0A2A4IYY5   A0A2W1BPF5   A0A194Q636   A0A385HW64   Q76IB6   A0A3G1LBE0   A0A3G1LBD4   A0A2A4K904   A0A2W1BZD4   A0A2A4JTT3   A0A2W1BV38   A0A2H1WST8   H9JMX4   H9B460   H9B455   A0A2T4HWM7   A0A1T3FC56  

PDB

3PUB     E-value=6.46441e-41,     Score=421

KEGG

101735732    no KO assigned | (RefSeq) low molecular mass 30 kDa lipoprotein 19G1-like

GO

GO:0005576   GO:0004523   GO:0031461   GO:0016791   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Length:

436

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00964999999999999

Exp number, first 60 AAs:

0.00951

Total prob of N-in:

0.00242

outside

1  -  436

 

 

Pi

2.34223

Theta

3.594619

Tajima's D

-0.917009

CLR

0.790956

CSRT

0.156442177891105

Interpretation

Uncertain