Gene

KWMTBOMO14255

Annotation

TRAS3_[Bombyx_mori]

Location

Bomo_Chr24(+):32396-37650      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.362

CDS

ATGTTCGGAATCAGGACTCCCCCACCGAAAAGCGACAACTCGTCCCCAAATTTGGATGAAGGGGCTCTCAATGTTAGACGCAGTATAGGCGAGTGGGAAGCGGCAAACGCTGATCCTACTCCATCAATGACATGCATGACGAAGCAGACTGGCCCTGCTACAAACCCGAAAGCTCGTCTAACTCCATCGCGGGACGCTTCAGCCGCAGCCGGACTTGGACCATCAACCGGAACCCACAGTCCACAAAAATTAAAGAACGCGGACCGTATTGCGGAGGCAAGAGCCTGCCTACACAAGGGCAAGCTACACCTTAACGCCTCTCGCAATACCAAAACAGAAATAAAGAGTGTGGTTTTCGAAGTTCTGGAGCGGTTGTATCAGCTTGTAAAGGAGGCTGAGGCAGCCCTAAAATCAAAAAAGCCTAAAGACGGAACTAACGCAACTGTGGGGCTAGAGCCGGTACCTATAGTCACTGACTCTACCTTCACAGTCAGCGAGGATCCTAAGCTATTGAGCAAAATAGAGGAGCACAGCAAATTGTTGCTAGAAAGCAACAAAAAAATGGAGGAGCTAAGACTAGCGATGGAGAGACAGCAAGAAAGCTTAAAAAGTACTGCAACATATGCGAGCGCGACCGCCACTCTGAACGAAAAGCCACTACCAAAACGGAATACGTTACACTCACTGGTGGTAACCTCAAAAAATGAATCGGAAACTGGAGAAGAGGTTTTAGATAGAGTTAGAAAGGCGGTTGACGCAAAGGAGGGTTGGATTAAGGTTGAAAGAGTAAGGAAGGCGAAAGATAGGAAAATCATAATGGGCTTCAGAACGACAGAAGAAAGGAACAAAATAAAAGATAGATTTGGAAAAGAGGGAATAGACCTCGTTGTCGAGGAGGTGAAAAATAAAGACCCACTCCTGATCCTCAAAAACGTCCTACTGGTCAATACTGATGAAGATGTTCTCAGGGCTTTGAGGAACCAGAACAGGGATGTCTTTCGCGGTCTGGACAGCGAGGAGGACAGGTTGGGAATTAAATACAGAAGAAGAACCAGGAATCCCCACACGAATCACATCGTGATCAGCACCTCCCCCGCTATCTGGCGTAAAGTCTTGGAAGTTGGATATCTGCATATTGATCTTCAGCGGGTCAAGGCGGAAGACCAATCTCCACTTGTGCAGTGTACTCGCTGCTTGGGGTACGAACAGCAGACAACAAAATACCTCCCTATAAATATAGCCCAGATTAACTTACAGCGCAAAAAACTAGCAACTGACGAATTAATGATTGAGGCGAACAGGGAGAAAATTGACATTGCTATGATCCAGGAACCCTATGTCGGTGGAGGAAGCTTTATGAGGGACTACAGAGGCGTAAAAATATACCAAAGAAATGGGACGGACGAGGGAACGGTAAAAACAGCAATAGCCGTATTTAATAAAGACCTCGAGGTAAATATGATTCCACACTTTACCACAAACAACATCTCGATGGTAAGAGTCAAAATAGCTTCATGGGAAATGTATGTCGTAGCATTCTACTTCGAGCCTGACCAACCAATCGACCCCTACCTAGAAAAATTAAGAGAAATAAAAACAGAATTGGGCACAAAGAAAATAATTATGGGGGGAGATATAAATGCAAAAAGCACCTGGTGGGGAGGGTTAAAGGAAGATAGTAGAGGAAGATCTGTGTCAGGAGCTATAGAAGAAATGAGAATGCAAATCCTAAATACCGGGGATACTCCGACTTTCTACACAATCAGAGGAAGCAAGATTTATAAAAGCTTCGTAGATATCACTCTCTGCTCAGAGAATATTTACGATCTTGTTGAGGACTGGGAAGTGAAGGACTTCATCAGCTCGGATCATGGTGTGATTACAATGAAGATTAAACTTCAAAGACAAAGAGGGAAAGAGATAGTGAGAACGACTAGATTATACAACACGAAGAAAGCGGACTGGGAAAAATTTCACAATAAGTTGACTGAAACAAAAAAAGATTACAACATACAATTAGATAAAGTTCAACAAATTAAAACTAGAAATGAATTGGAAAAATTTATAGAGACATATACTAAAGCAATGACCGATACATGTAAAAAAGTAATACCAATGAAGAAGAAAAAGGAAAAAGTTAACTTACCATGGTGGTCCGATGAACTCCGGAGATTGAAGAAGGACGTGATCACGAAGAAACGAAGAATCCGATGCGCAGCCCCAATCCGGAGGGAGAGTGTGATAAAAGAGTATCTGGAAGCAAAGGAAAAATATGAGAATGAAGTAAAAACTGCACAAGTAGAAAGCTGGAAGAACTTCTGCAATAAACAGGACAGAGAAGGAGTATGGGAAGGAATATATAGGGTCATTAGGAAAACATCGAGACAACCGGAGGATATGCCATTGATCAAGGATGGGAAATGCCTAGAACCGGAAGAATCGGCACAACTGCTGGCTAATACCTTTTATCCAAACGATACCGAAGAAGGGGAGAACTCATACCATCGCAAAGTAAGGAGCATGGCCAAACAGATAAACGAGGACCATGGTGAGCATGACCCGTCGTTTACATGGGACGAGCTACAAGCCTCGATGAAGAGTTTCAACCCCAAAAAAGCTCCAGGTGCGGACGGCTTCACAGCGGACATTTGTGAGCAGATAATGTTAGAAGATCCAAATCTGCTTCTAGCTACAATGAACAAATGTCTTGAGCTGGGTTGCTTTCCAACAATTTGGAAGGAAGCCACTGTAGTTGTGCTGAGGAAACCCGGGAAAACAGATTATACAAACCCCAAGGCATATAGACCGATAGGCCTTCTACCAGTACTCGGGAAAGTATTGGAGAAAATGACATTTAATAGAATCAAATGGCATATCCTTCCAAAATTAAGTAAAAGGCAATATGGGTTTATGCCCCAGAGATGTACGGAGGATGCCCTTTACGATTTGGTGAGCCATATTAGAAAAAAGTTGAAGGAAAAGAAACTCATCACTATGGTCTCACTGGATATTGAAGGGGCCTTCGACTCGGCATGGTGGCCTGCCATTAGACTCAGATTAGCCGAAGAAAATTGCCCAATAGATTTGCGGAAGGTTCTTGACAGCTATCTGGAAGACAGAAGAGTCGGAGTTAGATATGCTGGTCATGAATGTAAAAAGAAAACGGAGATAGGATGTGTGCAGGGATCAATCGGCGGACCCCTGCTATGGAATTTACTATTGGACCCCCTGCTGAAGAAATTGGAGAACGAGGGTGTTTATTGCCAGGCGTTCGCCGATGACGTCGTGCTTGTATTTGATGGTGAGACAGGGTTGGGCATGGAGAGGACAGCAAACAGAGTGCTGTCTTCTGTTGAAAAATGGGGAAAAAACAACAAATTGAAGTTTGCACCCCACAAGACCAAAGCCATGCTCATTACTAACAAACAAAAATTTGACGCACCAAAACTTAACATGGGAGGTACAACAATACAAATGAGCGATGAAATAAAAATTTTAGGTTTGATCATAGACAAAAAGCTAACATTCAACAACCATGTAAAGACAGCAACAAACAAAGCCATACAGATTTACAAACAGGTTGCCAGGGCGGCGAGAGTAAGCTGGGGGCTCCACCCCGATGTAATCCGTGCGATTTACACCGCGGTGGTGGAGCCCATTATCTTGTATGCGGCAAGTGCCTGGGCACCGGCTGCAGAGAGGGTATCGGTTCGCAAGAGTCTTGGCGTAGTACAGAGGGGATTTGTTCAAAAACTTTGCCGAGCATACCGTACAATCTCCCTCAACGCGGGGCTCTTGTTGACAGGACTGCTGCCACTGGACCTTAGGGTAAAAGAAGCAGCAACCCTGTACATGGCCAGAAAGGGTTACCCCACAGCCATAATTGGCGATTGGGAAATAGAAAGGATGGAGCCTGTCACTGTGATGGAACACCCTGCCGAGAGACTAATCATCAAATATGAGAACTTGGAAAACGACGAACAAACAAAGATTGCAATAGACAAATGCAATGTCCAGCTCTACACAGATGGAAGTAAAATTGACGGATTTGTCGGCGCTGCATATACTAAATGGATAGAGGGAAAAGAACAAAAACACAAAAAGCTGAAGCTGATGTCCTGCTGCACAGTTTTTCAGGCCGAGCTATTCGCGATAAATAGCGCCACTGAGGAGATCCTAAGATGTTCTGAGGACTCTTTTGGGATCTTCAGTGATTCGAGATCTTCGCTAGACATACTCAAAAATGGGAACAGCACACACCCTCTAGTCACAAAAATCACTAAAAACATAAACAACATTAAACTCCAGAAAAAGCAGATTACTCTATACTGGATAAAAGCTCATAACGGACTTGAAGGAAATGAAAGAGCCGACCAACTGGCAAAAGAAGCAGCGAAAAAGAAAGCAAAGCCTGAATACGATAAGTGCCCTATAGCATTCGTGAAAAGACGGATTCGTGAAGAATCCATCGACGAATGGAGCGAAAGATATGAGGCAGGCACAACAGCAGGGACTACAAAACTATTTTTCCCTAATGCAGCAGCTGCAAAGAAAATAATAGACACAATTAAACCGACAGGTGTTATGACACAGATTCTGACTGGACACGGTGGCTTCTCCGAGTACCTGGCTAGGTTCAGGTGCAAGGAGAGCCCAGCGTGTCCTTGTGACGGTGGTACGCCGGAGACGATCCCACACATATTAACGGAGTGCCCAATATCCGGGCCTGAGAGATTCAATATAGAACAATTAATAGGCGTAACAATTAAAACAGAAAATTTCCAGAAGCTAATATCCCAAAAAGAAACACAAGAGCAGTTTCTAGAATACTGTATAAAAGTTTGTAAAAAAGTAATAGTAAGAAACAAATAG

Protein

MFGIRTPPPKSDNSSPNLDEGALNVRRSIGEWEAANADPTPSMTCMTKQTGPATNPKARLTPSRDASAAAGLGPSTGTHSPQKLKNADRIAEARACLHKGKLHLNASRNTKTEIKSVVFEVLERLYQLVKEAEAALKSKKPKDGTNATVGLEPVPIVTDSTFTVSEDPKLLSKIEEHSKLLLESNKKMEELRLAMERQQESLKSTATYASATATLNEKPLPKRNTLHSLVVTSKNESETGEEVLDRVRKAVDAKEGWIKVERVRKAKDRKIIMGFRTTEERNKIKDRFGKEGIDLVVEEVKNKDPLLILKNVLLVNTDEDVLRALRNQNRDVFRGLDSEEDRLGIKYRRRTRNPHTNHIVISTSPAIWRKVLEVGYLHIDLQRVKAEDQSPLVQCTRCLGYEQQTTKYLPINIAQINLQRKKLATDELMIEANREKIDIAMIQEPYVGGGSFMRDYRGVKIYQRNGTDEGTVKTAIAVFNKDLEVNMIPHFTTNNISMVRVKIASWEMYVVAFYFEPDQPIDPYLEKLREIKTELGTKKIIMGGDINAKSTWWGGLKEDSRGRSVSGAIEEMRMQILNTGDTPTFYTIRGSKIYKSFVDITLCSENIYDLVEDWEVKDFISSDHGVITMKIKLQRQRGKEIVRTTRLYNTKKADWEKFHNKLTETKKDYNIQLDKVQQIKTRNELEKFIETYTKAMTDTCKKVIPMKKKKEKVNLPWWSDELRRLKKDVITKKRRIRCAAPIRRESVIKEYLEAKEKYENEVKTAQVESWKNFCNKQDREGVWEGIYRVIRKTSRQPEDMPLIKDGKCLEPEESAQLLANTFYPNDTEEGENSYHRKVRSMAKQINEDHGEHDPSFTWDELQASMKSFNPKKAPGADGFTADICEQIMLEDPNLLLATMNKCLELGCFPTIWKEATVVVLRKPGKTDYTNPKAYRPIGLLPVLGKVLEKMTFNRIKWHILPKLSKRQYGFMPQRCTEDALYDLVSHIRKKLKEKKLITMVSLDIEGAFDSAWWPAIRLRLAEENCPIDLRKVLDSYLEDRRVGVRYAGHECKKKTEIGCVQGSIGGPLLWNLLLDPLLKKLENEGVYCQAFADDVVLVFDGETGLGMERTANRVLSSVEKWGKNNKLKFAPHKTKAMLITNKQKFDAPKLNMGGTTIQMSDEIKILGLIIDKKLTFNNHVKTATNKAIQIYKQVARAARVSWGLHPDVIRAIYTAVVEPIILYAASAWAPAAERVSVRKSLGVVQRGFVQKLCRAYRTISLNAGLLLTGLLPLDLRVKEAATLYMARKGYPTAIIGDWEIERMEPVTVMEHPAERLIIKYENLENDEQTKIAIDKCNVQLYTDGSKIDGFVGAAYTKWIEGKEQKHKKLKLMSCCTVFQAELFAINSATEEILRCSEDSFGIFSDSRSSLDILKNGNSTHPLVTKITKNINNIKLQKKQITLYWIKAHNGLEGNERADQLAKEAAKKKAKPEYDKCPIAFVKRRIREESIDEWSERYEAGTTAGTTKLFFPNAAAAKKIIDTIKPTGVMTQILTGHGGFSEYLARFRCKESPACPCDGGTPETIPHILTECPISGPERFNIEQLIGVTIKTENFQKLISQKETQEQFLEYCIKVCKKVIVRNK

Uniprot

Q9BLI5   Q93139   A0A224X5M4   A0A0K1IK29   A0A1W7R9Y4   A0A087TI44   + More
A0A0K1IK14   A0A087UHT1   A0A087TAD8   A0A142LX31   U5EW32   A0A142LX29   U5EVA2   U5EV73   U5EV16   O18558   U5ERR6   A0A224XIB2   A0A224XH41   A3FMR3   A0A226E8J9   U5ES21   U5EG91  

Pubmed

11319268    7623845    15247245    25527032    17521654   

EMBL

AB046668    BAB21511.1    D38414    BAA07467.1    GFTR01008639    JAW07787.1    + More
KP771711    AKU04648.1    GFAH01000444    JAV47945.1    KK115320    KFM64783.1    KP771712    AKU04650.1    KK119855    KFM76920.1    KK114278    KFM62077.1    KU543676    AMS38357.1    GANO01003141    JAB56730.1    KU543675    AMS38355.1    GANO01003496    JAB56375.1    GANO01003537    JAB56334.1    GANO01003611    JAB56260.1    U87543    AAB65093.1    GANO01003612    JAB56259.1    GFTR01008645    JAW07781.1    GFTR01008646    JAW07780.1    EF413180    ABN58714.1    LNIX01000005    OXA53875.1    GANO01003451    JAB56420.1    GANO01003539    JAB56332.1   

Proteomes

UP000054359    UP000198287   

PRIDE

Q9BLI5    Q93139   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00075   RNase_H
PF00078   RVT_1

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR012337   RNaseH-like_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR013604   7TM_chemorcpt       

SUPFAM

SSF56219   SSF56219        + More
SSF53098   SSF53098       

Gene 3D

3.30.420.10     3.60.10.10    

ProteinModelPortal

Q9BLI5   Q93139   A0A224X5M4   A0A0K1IK29   A0A1W7R9Y4   A0A087TI44   + More
A0A0K1IK14   A0A087UHT1   A0A087TAD8   A0A142LX31   U5EW32   A0A142LX29   U5EVA2   U5EV73   U5EV16   O18558   U5ERR6   A0A224XIB2   A0A224XH41   A3FMR3   A0A226E8J9   U5ES21   U5EG91  

PDB

1WDU     E-value=7.62039e-66,     Score=642

KEGG

105842369    no KO assigned | (RefSeq) uncharacterized LOC105842369

GO

GO:0004523   GO:0003676   GO:0016021   GO:0031461   GO:0016791   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR21143  

Length:

1623

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19924

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1  -  1623

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

3.77422

CSRT

0

Interpretation

Uncertain