SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14251  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011166
Annotation
protein_kinase_C_inhibitor_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.875
 

Sequence

CDS
ATGTTCAACAAAGTTTTCCAACGCGCACTAAAATTTCGATTGAAAAAGACTTATCCTACGAACATCTATGATCTGTCTCGGGGTTCTGCTGTGGCTGTGAAGCGGCCGTACAGCGACGAAGTCCGCAGAGCACACGAAACGACCACTACGATCGGGCCCACAATATTCGACAAGATCATATCTAAGGAGATCAGAGCCGATATCATATACGAAGATGATTTATGTCTTGCTTTTAACGACATAGCACCGCAGGCGCCAGTACATTTTCTTGTTATTCCAAAGCGTAGAATAGCAAGGTTGCAGGATGCGGAGAACAACGACAACGAGCTGCTAGGTCACTTGATGCTGGTAGCCCGGTCACTCGGTGCCCAAAGAGCTCCTTCAGGATGGCGTCTTGTGGTTAACAATGGCAAAGACGGAGCTCAAAGTGTTTATCATCTACACCTTCATGTTCTGGGTGGAAGACAGATGGGCTGGCCACCTGGAATTTCTGGTTCTAAAGAACTAGATTCACAATAG
Protein
MFNKVFQRALKFRLKKTYPTNIYDLSRGSAVAVKRPYSDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSLGAQRAPSGWRLVVNNGKDGAQSVYHLHLHVLGGRQMGWPPGISGSKELDSQ

Summary

Pfam
PF01230   HIT
Interpro
IPR001310   Histidine_triad_HIT        + More
IPR019808   Histidine_triad_CS       
IPR036265   HIT-like_sf       
IPR011146   HIT-like       
SUPFAM
SSF54197   SSF54197       
Gene 3D
PDB
3QGZ     E-value=1.78927e-38,     Score=395

Ontologies

Topology

Length:
172
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00264
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11059
outside
1  -  172
 
 

Population Genetic Test Statistics

Pi
6.60968
Theta
12.508384
Tajima's D
-0.779651
CLR
0.190938
CSRT
0.184440777961102
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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