Gene
KWMTBOMO14247
Pre Gene Modal
BGIBMGA011160
Annotation
sid-1-related_gene1_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 2.548
Sequence
CDS
ATGAGCAGCCAGGGGGGGATCACGCTCACCCAAGCAATGTTCCCGTCGGGATTTTACGTGGTGCTGATAGTGCGACAGAGCGATGCGGACTGCACGGGCGCGAGCGAGACGGAGGACGCTCCCAAATCCTTCCCCGCCAAGCGCAGCAAGACATTCAGGTTGAAGATAATAGCGACGATATCCTACCAGGAGTACCTAGTGGGCGCGCTGGTGAGTGCGGCGCTGGTGCTGCTAGTGGCGCTCTTCGTGCTGGCGCTGCTGCTGCCCTGTCCCTGCAGGTGCACAGGTCAGAGCCCCCTTCCCTCGCCATACTCGAGCTCTGGACCCGCCGATGTGAACACCTTAACTAGAGCGGGCGACTGTGACGTCATCTGTGATGAAATTAATCTGCTATCTGCCAATAGACACAAGATCAGTGACGCGCTGCGTGTGCTGCTGCAGGGCCGTTAG
Protein
MSSQGGITLTQAMFPSGFYVVLIVRQSDADCTGASETEDAPKSFPAKRSKTFRLKIIATISYQEYLVGALVSAALVLLVALFVLALLLPCPCRCTGQSPLPSPYSSSGPADVNTLTRAGDCDVICDEINLLSANRHKISDALRVLLQGR
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF13965 SID-1_RNA_chan
Interpro
IPR025958
SID1_TM_fam
ProteinModelPortal
Ontologies
GO
PANTHER
Topology
Length:
149
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
35.1761900000001
Exp number, first 60 AAs:
12.39745
Total prob of N-in:
0.35610
POSSIBLE N-term signal
sequence
outside
1 - 4
TMhelix
5 - 24
inside
25 - 64
TMhelix
65 - 87
outside
88 - 149
Population Genetic Test Statistics
Pi
14.195272
Theta
6.495618
Tajima's D
1.868427
CLR
0.563594
CSRT
0.875356232188391
Interpretation
Uncertain
