Gene

KWMTBOMO14246

Pre Gene Modal

BGIBMGA011159

Annotation

sid-1-related_gene1_precursor_[Bombyx_mori]

Location

Bomo_Chr23(+):21336443-21338807      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.814

CDS

ATGATGGGATATCGAAAGATATTATTGTTAATGCTAATTAAAATATCATATTGTTTTAAAAACAGCGTTAACTTAGCTGTGAATAGAACATTTCAGTACAATATATATAATTACGACACTTGGATTAATTTACAAGTAAACAACACCATTGAACAAATTTTAGACTTTACCGAGGACTCTGATAAGCTCCTTGGTTTCCCTACAAGAGTTCACGTAACAACTAATAGTACACTCACAAGTGATCATCCTCTATTCATTACGGCCACACAACAGAAAGGCGTGTCCTCATGGGAACTCCCGTTGGTGCTACAGACAGACGATTACTTCTTGATGCTAAACGACATGGGCAGGACTTTGTGCCCTCACGATGCAGGTTCAGGTCAGTGTCTGTCTCATCTCTTTAACTTCCATCTGTGA

Protein

MMGYRKILLLMLIKISYCFKNSVNLAVNRTFQYNIYNYDTWINLQVNNTIEQILDFTEDSDKLLGFPTRVHVTTNSTLTSDHPLFITATQQKGVSSWELPLVLQTDDYFLMLNDMGRTLCPHDAGSGQCLSHLFNFHL

Uniprot

A9CQK8   E2DQE0   A0A2W1B6M8   A0A1E1VYU1   V9VIE0   A0A194PYX2   + More
A0A194RII4   V9VLL3   A0A2H1VSR1   A0A2W1BCY1   A0A2A4JCH4   A0A2A4IUB4   A0A1E1WV14   K9LY69   A0A0L7QWU5   A9CQL1   E2CWC0   A0A164NKG6   F8UV63   M4QN91   A0A0P5WVG6   A0A0P5R2F9   A0A0P5H3A8   A0A0P5ZZL8   A0A0P5WWE1   A0A0P5ZQL1   A0A0P4XLY5   A0A0P5WWD6   A0A0P5EPL1   A0A0P5J2Y6   A0A0P5CTR4   A0A0P5S1J9   A0A0P5MSQ1   A0A0P6ALS7  

Pubmed

18201385    28756777    26354079    21655219   

EMBL

AB327183    BAF95805.1    GU111530    ADN51979.1    KZ150434    PZC70881.1    + More
GDQN01011200    JAT79854.1    KF717089    AHC98014.1    KQ459593    KPI96355.1    KQ460152    KPJ17372.1    KF717088    AHC98013.1    ODYU01004221    SOQ43870.1    KZ150361    PZC71187.1    NWSH01002069    PCG69254.1    NWSH01007994    PCG62730.1    GDQN01000236    JAT90818.1    JN676095    AFQ00936.1    KQ414706    KOC63087.1    AB327184    BAF95806.1    GQ370623    ADI88514.1    LRGB01002849    KZS06033.1    JF915743    AEI25514.1    KC316047    AGH30336.1    GDIP01081086    JAM22629.1    GDIQ01108724    JAL43002.1    GDIQ01255468    JAJ96256.1    GDIP01041041    JAM62674.1    GDIP01081076    JAM22639.1    GDIP01041040    JAM62675.1    GDIP01239367    JAI84034.1    GDIP01081085    JAM22630.1    GDIQ01267009    JAJ84715.1    GDIQ01211892    JAK39833.1    GDIP01166878    JAJ56524.1    GDIQ01093532    JAL58194.1    GDIQ01151764    JAK99961.1    GDIP01041042    JAM62673.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000053825    UP000076858   

PRIDE

A9CQK8    A9CQL1   

Pfam

PF13965   SID-1_RNA_chan

Interpro

IPR025958   SID1_TM_fam       

ProteinModelPortal

A9CQK8   E2DQE0   A0A2W1B6M8   A0A1E1VYU1   V9VIE0   A0A194PYX2   + More
A0A194RII4   V9VLL3   A0A2H1VSR1   A0A2W1BCY1   A0A2A4JCH4   A0A2A4IUB4   A0A1E1WV14   K9LY69   A0A0L7QWU5   A9CQL1   E2CWC0   A0A164NKG6   F8UV63   M4QN91   A0A0P5WVG6   A0A0P5R2F9   A0A0P5H3A8   A0A0P5ZZL8   A0A0P5WWE1   A0A0P5ZQL1   A0A0P4XLY5   A0A0P5WWD6   A0A0P5EPL1   A0A0P5J2Y6   A0A0P5CTR4   A0A0P5S1J9   A0A0P5MSQ1   A0A0P6ALS7  

KEGG

100134917    no KO assigned | (RefSeq) Sir-1; sid-1-related gene1

GO

GO:0033227   GO:0016021   GO:0051033  

PANTHER

PTHR12185  

SignalP

Position:   1 - 18,         Likelihood:  0.795254

 

 

Length:

138

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.449750000000001

Exp number, first 60 AAs:

0.44937

Total prob of N-in:

0.09641

outside

1  -  138

 

 

Pi

16.552224

Theta

7.823416

Tajima's D

1.783813

CLR

0.775936

CSRT

0.856857157142143

Interpretation

Uncertain