Silkworm Genome Informatics Database

Gene

KWMTBOMO14225

Pre Gene Modal

BGIBMGA011113

Annotation

PREDICTED:_kinesin-related_protein_6-like_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr23(-):20969907-20988611 View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear Reliability : 4.137

CDS

ATGGGTTATTATTGTACGGTACCACAATGTACATCTTTAGCCGGCAAGACGAAAAACGTGAAATTTCATAAGTTTCCTAAAGATAAGACGATGGAGAAAAGATGGAATGAAATACTGAAGCGCGGGAAACCTGTCACGATATATTCAAAAGTTTGCAGTCTACATTTTACGCAGGCGGACTACAATATTACGACAATGGGACAGTGGAAGACGCTTAACAAGGACGCTGTGCCTTCGCAGAACTTGCCGAAACTGAACCCTGATGGCTCCGTCATGGTTATAAGGAAGAGTCGTACAGTTAAATACAAGGAGACCAAGAAACACGAGATGAACGGCGAAAAATCTGAGAGAATATGGGGGATCACACCACAGAATCACGGCCAGACGAATATGAATCCAGATTTGCCGCTGCCGTGCACGGAACAAGATATTAATCTTTCGTGCAAAATGCAGTACGTAACGTCCCTAGCGAGCGAACCTTCGCCCCCCCAGCTACGGACGCAGCCGCCCCCCGCGCGCCCCAAGAAGCAGGACGCGATCATGCAGACCGACCCCGTGCCGTCGGACGAGGAGCCCAGGGACAGCTACGCGGACTGCCTGCCGTACAAAGACGATTACATACCGCAGACGAACGAAGAGTACAACACAGAGGCGGAGAAGTACGCGCTGGAGAGGAAGAGTCACTATGAGAAGACAGAGTTCCTCGAGAAGTACCGGAGCGACCTGTACTACCCGGACTCGGTCGAGATGCTCAAGAATCAGCAGCAGAACCTGCAGCTGCTGCAGGACGAGCGCAGGATGAACGGGAACCAGGGTTTCTTCAACGAGGCCGAGATCAAACAGGAAATAGACATACCGGTCGACGATGAAAAGTATTTGTACGAGCGGAAAGACATGGAAGCGGAAGCGGTCTACAGCGACAGCCAGAGACAAATAATAATCGAACACATACAGAACCAAGTGAAACAGGAGCCGGACTTGAGCAACGGCTGTGAAAACGTGTGTCTTCAGCCTCAGAGCAGTCCATACTATCAGAACGGTCATAACGATGTCAACATCGTGTACTACGATCAGGTGTCACGTCCCGGACCCGAGCTCCTGATAGCGAAACAGAACGCCCTGGCGGCGCACACGCAACTCTGGCAGAACACGGTGAAAAGACCTTTTTTTTACAGTGAAAATTCGCATTACACCGGATCCCAGCTGCTACATAGATACGAGGATCTCACGAGGATTTTACAGTGA

Protein

MGYYCTVPQCTSLAGKTKNVKFHKFPKDKTMEKRWNEILKRGKPVTIYSKVCSLHFTQADYNITTMGQWKTLNKDAVPSQNLPKLNPDGSVMVIRKSRTVKYKETKKHEMNGEKSERIWGITPQNHGQTNMNPDLPLPCTEQDINLSCKMQYVTSLASEPSPPQLRTQPPPARPKKQDAIMQTDPVPSDEEPRDSYADCLPYKDDYIPQTNEEYNTEAEKYALERKSHYEKTEFLEKYRSDLYYPDSVEMLKNQQQNLQLLQDERRMNGNQGFFNEAEIKQEIDIPVDDEKYLYERKDMEAEAVYSDSQRQIIIEHIQNQVKQEPDLSNGCENVCLQPQSSPYYQNGHNDVNIVYYDQVSRPGPELLIAKQNALAAHTQLWQNTVKRPFFYSENSHYTGSQLLHRYEDLTRILQ

Uniprot

A0A194PTS9 A0A194RIF9 A0A2H1W0N5 A0A2A4JIE6 A0A2H1VI12 A0A2W1BH03 + More

Pubmed

26354079 28756777

EMBL

KQ459593 KPI96378.1 KQ460152 KPJ17347.1 ODYU01005336 SOQ46074.1 + More
NWSH01001313 PCG71741.1 ODYU01002652 SOQ40436.1 KZ150223 PZC72080.1

Proteomes

UP000053268 UP000053240 UP000218220

ProteinModelPortal

A0A194PTS9 A0A194RIF9 A0A2H1W0N5 A0A2A4JIE6 A0A2H1VI12 A0A2W1BH03 + More

PDB

2D8R E-value=9.87794e-06, Score=118

KEGG

101744553 no KO assigned | (RefSeq) uncharacterized LOC101744553

GO

GO:0003676 GO:0008270 GO:0015074 GO:0006355 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

414

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00095

Exp number, first 60 AAs:

0.00077

Total prob of N-in:

0.01405

outside

1 - 414

Pi

0.293654

Theta

1.656531

Tajima's D

-1.880405

CLR

10.435965

CSRT

0.0126993650317484

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics