SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14216  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011145
Annotation
putative_fatty_acyl_reductase_FAR1_[Spodoptera_litura]
Full name
Fatty acyl-CoA reductase      
Location in the cell
Cytoplasmic   Reliability : 1.243 PlasmaMembrane   Reliability : 1.611
 

Sequence

CDS
ATGGTTGCGGATATCCAAAAATATTCACCGAAGATGAAGCCAGTTGGTGAGGTGACTGGGTTCGACGCGATGGATAAGCTGGAGGCGTTGGGAGAGTCACAGATCGGGAAGATGTTCGCTGGGACCACGGTGCTACTGACCGGGGGCACAGGGTTCCTGGGGAAGCTGATGGTCGACAAACTTTTGAGATGCTGTCCGGATTTAAAAAAGCTGTTCCTACTGGCGAGACCAAAGAAAAATAAAGATATCGCGAAAAGGCTGCAGGAACAGTTTGATGACGTGCTATACGACAAGCTAAGGAAGGAGAGACCGAATTTTATAGAGAAAATATGTATAGTCGAGGGAGATGTAGGTGCTATCAACCTTGGACTCAGTCAAGAGGATCGAACGAAAATCGCTAATGAGGTTGAATTTATCTTCCACGGAGCCGCCACCGTGAGGTTCGACGAGGCTCTGAAGACAGCCGTGGAGATAAACGTGCGGGGCACCAGAGAGATGTGTATTTTGGCCAGATCCTGTGGGAAGCTGAAGGCTCTAGTTCACATTTCGACCGCATACAGTAACTGCACCGTAATGGAGATCGAAGAGAGATTCTACGAGAGCTCCCTCCCTGGTGACAAACTCATCGACCTGGTGGAAACTATGGACGAGAAGGTTATAAACAGCATCACTCCCGGTTTACTGGGGGATTTCCCGAATACGTATGCGTATACGAAATCTGTGGCCGAAGACGTGGTGCAGAAATACTCGAAGGGTCTTCCGGTGGCTTTGTTCAGGCCGTCCATAGTAATTGGAACAGCCAAAGAACCAGTCGCGGGGTGGATAGACAACGTATATGGACCTACAGGGGTTGTGGTAGGAGCCGCAGTGGGTCTACTTCACGCTCTGATCTGCAAACCCAACGCGGTAGCTGACTTGGTCCCCGGAGATATGGTTGTAAACGCTTGCATTGCAACCGCCTGGAAGACAGCCAAAGACTATCCGGGCAACCACGAGGACGCTCCACCCCCGGACCTGACGCCACCAGTTTACAACTTTGTTTCCTCAACACAGAAGCCCCTGACTTGGAGTAAATTCATGAAATACAATGAGATATATGGCCTCGAAGTGCCCACGGTGCAAGCGATTTATTACTACGTGTTTATGTTGACGTCTTCTCGTTTCGCCTACACCCTGTACTGTTTCTTCCTGCACTGGATCCCGGCCTACATCATCGATGGAGTGGCTGTGCTGATAGGCAAAAAGCCAATGCTAAGGAAAGCGTATACGAAGATAAGCAAATTCTCCGAAGTCATATCGTATTTCGCGACGCGCGAGTGGAAATTCCACAGCGGCAACACGGAGGGTCTGGTGCGGGAGCTGTGCCCGGCAGACCGGCAGACGTTCGACTTTGATTTGTCGCGGCTCGACTGGAGCGAATACTTCTACAACTACGTCAGGGGCGTCCGGGTGTACCTGCTCAAGGATCCGGTGGAAACAGTACCGGCCGGCCTCAGGAGGCATAACATACTGAAGTACTCGCACTATATCTTCTGTGCTGTATTAACGTTTGTGCTGGTCAGACTGTTGTGGGCCGCGTGGAGTCTTTTAGACCTTTAA
Protein
MVADIQKYSPKMKPVGEVTGFDAMDKLEALGESQIGKMFAGTTVLLTGGTGFLGKLMVDKLLRCCPDLKKLFLLARPKKNKDIAKRLQEQFDDVLYDKLRKERPNFIEKICIVEGDVGAINLGLSQEDRTKIANEVEFIFHGAATVRFDEALKTAVEINVRGTREMCILARSCGKLKALVHISTAYSNCTVMEIEERFYESSLPGDKLIDLVETMDEKVINSITPGLLGDFPNTYAYTKSVAEDVVQKYSKGLPVALFRPSIVIGTAKEPVAGWIDNVYGPTGVVVGAAVGLLHALICKPNAVADLVPGDMVVNACIATAWKTAKDYPGNHEDAPPPDLTPPVYNFVSSTQKPLTWSKFMKYNEIYGLEVPTVQAIYYYVFMLTSSRFAYTLYCFFLHWIPAYIIDGVAVLIGKKPMLRKAYTKISKFSEVISYFATREWKFHSGNTEGLVRELCPADRQTFDFDLSRLDWSEYFYNYVRGVRVYLLKDPVETVPAGLRRHNILKYSHYIFCAVLTFVLVRLLWAAWSLLDL

Summary

Description
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
Catalytic Activity
a long-chain fatty acyl-CoA + 2 H(+) + 2 NADPH = a long-chain primary fatty alcohol + CoA + 2 NADP(+)
Similarity
Belongs to the fatty acyl-CoA reductase family.
Feature
chain  Fatty acyl-CoA reductase
EC Number
1.2.1.84
EMBL
BABH01035163    BABH01035164    KT261695    ALJ30235.1    KU755476    ARD71186.1    + More
RSAL01000044    RVE50678.1    KZ150217    PZC72130.1    KP237913    MF687534    AKD01766.1    ATJ44460.1    KJ622061    AID66649.1    KP237926    MF687596    AKD01779.1    ATJ44522.1    KQ459593    KPI96403.1    KQ460036    KPJ18430.1    AGBW02011118    OWR47192.1    ADTU01015701    ADTU01015702    KQ982194    KYQ59115.1    GL888353    EGI62240.1    KQ976870    KYN07801.1    GECU01024246    JAS83460.1    GECU01016929    JAS90777.1    KK853504    KDR07123.1    GECZ01027740    JAS42029.1    KQ979039    KYN23453.1    NNAY01003198    OXU19820.1    GEBQ01030984    JAT08993.1    APGK01044237    APGK01044238    KB741021    ENN75098.1    GEZM01028194    GEZM01028193    JAV86394.1    KQ435694    KOX80980.1    ABLF02017919    ABLF02017920    OXU19819.1    KQ981905    KYN33349.1    KQ976417    KYM89582.1    GGMS01011572    MBY80775.1    KK107031    QOIP01000008    EZA62096.1    RLU19323.1    KQ978379    KYM94471.1    GEZM01061226    JAV70627.1    KQ982576    KYQ54647.1    GL761538    EFZ23139.1    GGMS01010440    MBY79643.1    GL443286    EFN62238.1    GGMR01018223    MBY30842.1    NEVH01011924    PNF31087.1    NEVH01009426    PNF32977.1    MG573160    AWJ25022.1    GL887695    EGI70414.1    KQ980903    KYN11612.1    GL448287    EFN84876.1    KQ414672    KOC64230.1    AJWK01024997    AJWK01024998    AJWK01024999    ABLF02012968    KQ971345    EFA05024.1    MG573162    AWJ25024.1    NEVH01002545    PNF42320.1    ABLF02017921    UFQS01000315    UFQT01000315    SSX02758.1    SSX23130.1    NNAY01001243    OXU24628.1    GEDC01000976    JAS36322.1    EFN62239.1    UFQS01002712    UFQT01002712    SSX14582.1    SSX33980.1    SSX14581.1    SSX33979.1    GFXV01003673    MBW15478.1    LJIG01001484    KRT85456.1    KK853249    KDR09345.1    GECZ01027241    JAS42528.1    GL440368    EFN65993.1    KQ971357    EFA08474.2    GECU01013749    JAS93957.1    GECU01028612    JAS79094.1    AAZX01006711    GBYB01003931    JAG73698.1    ABLF02026798    GFXV01007576    MBW19381.1    NNAY01000061    OXU31410.1    KQ764772    OAD54398.1    KQ981208    KYN44829.1    GEBQ01025216    JAT14761.1    GBHO01038325    GBHO01038321    GBRD01012464    GDHC01011251    JAG05279.1    JAG05283.1    JAG53360.1    JAQ07378.1    GEBQ01012294    JAT27683.1    MG573171    AWJ25033.1    MG573167    AWJ25029.1    PNF42309.1    GEDC01021312    JAS15986.1    GEDC01010770    JAS26528.1    HM536636    ADI87412.1    NNAY01001641    OXU23345.1    KZ288460    PBC25481.1    JR049440    AEY60965.1    KQ414617    KOC68027.1    KQ776822    OAD52165.1    CVRI01000054    CRL00357.1    GBYB01002483    JAG72250.1    ABLF02017029    GBXI01015281    GBXI01013342    GBXI01011681    GBXI01007379    GBXI01001263    JAC99010.1    JAD00950.1    JAD02611.1    JAD06913.1    JAD13029.1   
Pfam
PF07993   NAD_binding_4        + More
PF03015   Sterile
Interpro
IPR026055   FAR        + More
IPR013120   Male_sterile_NAD-bd       
IPR036291   NAD(P)-bd_dom_sf       
IPR033640   FAR_C       
SUPFAM
SSF51735   SSF51735       
PDB
4W4T     E-value=3.84834e-09,     Score=148

Ontologies

Topology

Length:
532
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
59.4463800000001
Exp number, first 60 AAs:
2.93125
Total prob of N-in:
0.16884
outside
1  -  388
TMhelix
389  -  411
inside
412  -  507
TMhelix
508  -  530
outside
531  -  532
 
 

Population Genetic Test Statistics

Pi
6.349821
Theta
13.952805
Tajima's D
-1.211505
CLR
3.539518
CSRT
0.0981950902454877
Interpretation
Uncertain
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