Gene

KWMTBOMO14215  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011144

Annotation

PREDICTED:_peroxisomal_biogenesis_factor_19_[Amyelois_transitella]

Location

Bomo_Chr23(+):20632363-20644457      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.096

CDS

ATGTCTGACAATAAGAACGCATCCAAAAACGATCAAGATCCTGAATTAGACGATTTATTGAACAGTGCACTTCAGGATATGACAAAGAAGAAAGATGATAAGCCAAACGATACCACTCCTGATGGTGGCGAAGCAATGCAGAACATGTGGGGCGAGGAATTTATCAAAGAAGCAGCTGCTCAGTTTGAGAGCAACATGGCAGCTATCCTAGGCAGTTTCAGTGGAGTGCCAGAGGATCAGATAACACAAGAACAAATTGCATTAACTTTCAACAAAATGGCTGAAGCAGCATCACAGGTGTTAAAGCAAGGTGAATCGAGTGAAACAGAACCAAAGACAGATGACACGGCAGTACCGAAGGCAGATCAGGTCTCGGCAGCCATTTCGCAGACATTACAGAATTTGAACTCCAACTCTGAGAATCTTCAGACGCCTTTCTCAGAACAAGATCTAGCGAACATGTTTAATAATTTCAATTTAGGTGAAGGGGGCCAGGAAGGAAACATGTTCCTGCCCTTCATGCAGGGGATGATGCAGTCGCTCTTGTCGAAAGAAGTTTTATACCCATCTTTGAAGGAGCTAGTCGACAAATATCCAAGTTGGTTGAACGAGAACAAGACAAAGATTGAACAAAGCGAATACGAAAGATTCGAAAAACAGCAAACGTTAATGCAGCAAGTATGTGCTGAACTCGAGAACGAATTGGATAGTGACAGTGAAGAAGTTAAGAGAAAACGCTTCGAGAAAGTGTTGGAGTTGATGCAGAAGATGCAAGACCTAGGCCAGCCTCCCACTGAGCTGGTCGGGGATATAGGACCGGTACCTCAGAGCTTCGGTCCAGCGGCACAGGATCCATCACAATGTTGCATCAACTAG

Protein

MSDNKNASKNDQDPELDDLLNSALQDMTKKKDDKPNDTTPDGGEAMQNMWGEEFIKEAAAQFESNMAAILGSFSGVPEDQITQEQIALTFNKMAEAASQVLKQGESSETEPKTDDTAVPKADQVSAAISQTLQNLNSNSENLQTPFSEQDLANMFNNFNLGEGGQEGNMFLPFMQGMMQSLLSKEVLYPSLKELVDKYPSWLNENKTKIEQSEYERFEKQQTLMQQVCAELENELDSDSEEVKRKRFEKVLELMQKMQDLGQPPTELVGDIGPVPQSFGPAAQDPSQCCIN

Uniprot

H9JNP0   A0A3S2NWJ1   A0A2A4K2P2   A0A2W1BGR7   A0A194PZ12   A0A212F1K6   + More
A0A0N1IHV7   A0A2H1VUK4   A0A2H1WKF7   A0A067QRF9   Q1HQH5   A0A023EQ27   A0A2J7RA55   A0A2M4AF94   A0A2M4AFH5   A0A2M3Z423   A0A2M3Z4A6   A0A2M4AFI6   W5JGH7   A0A2M4BUZ9   A0A2M4BUX1   A0A182JZM0   D2A5I0   A0A182F2U0   A0A182LSZ8   A0A182ILD8   A0A182Y9A9   A0A084VJ94   A0A182P5G8   A0A182WA04   A0A1W4WHV8   Q17BF2   A0A182QQC4   A0A182X611   A0A182UGM3   A0A182IB35   A0A182V2X6   A0A182LJZ6   A0NE60   A0A182NT58   A0A1J1IP15   A0A1Q3FBU8   B0WPW5   A0A182R2J2   A0A1Y1N8N8   A0A1B0D140   A0A182T626   A0A1L8DCX4   A0A1B0CDN0   U5ER89   K7IM63   A0A232EYX6   N6T3V9   A0A0K8TSZ6   A0A1Q3FEQ9   J3JYA1   A0A0Q9X151   C3YPM8   A0A2A3E2H6   B4N771   A0A1S3ISW8   B4P1Y4   B4IE62   B4Q3Q0   A0A1A9UL13   A0A3B0K618   Q29NK5   B3MVH8   Q8T9H4   A0A1W4VC02   E0W135   B4KI00   A0A1A9ZD26   Q8IP97   H0RND5   A0A087ZNK5   D3TMI9   A0A1A9XCR1   A0A1B0C460   A0A1I8QD73   B4JBL5   A0A0J7JZX0   E2A8G4   A0A336MIV1   T1PBP4   K1Q532   A0A0P4W0R9   B3N3X4   A0A158NN30   A0A1B0FBW1   A0A1L8EE41   A0A0N0U2J3   B4LSF4   A0A1A9WKW2   A0A0P4ZHX1  

Pubmed

19121390    28756777    26354079    22118469    24845553    17204158    + More
17510324    24945155    26483478    20920257    23761445    18362917    19820115    25244985    24438588    20966253    12364791    14747013    17210077    28004739    20075255    28648823    23537049    26369729    22516182    17994087    18563158    17550304    22936249    15632085    20566863    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    20798317    25315136    22992520    27129103    21347285   

EMBL

BABH01035155    BABH01035156    BABH01035157    RSAL01000044    RVE50677.1    NWSH01000230    + More
PCG78174.1    KZ150147    PZC72874.1    KQ459593    KPI96395.1    AGBW02010856    OWR47617.1    KQ460036    KPJ18437.1    ODYU01004532    SOQ44515.1    ODYU01009254    SOQ53539.1    KK853026    KDR12308.1    DQ440469    CH477322    ABF18502.1    EAT43591.1    JXUM01009874    GAPW01002949    KQ560294    JAC10649.1    KXJ83214.1    NEVH01006578    PNF37713.1    GGFK01006129    MBW39450.1    GGFK01006213    MBW39534.1    GGFM01002521    MBW23272.1    GGFM01002595    MBW23346.1    GGFK01006186    MBW39507.1    ADMH02001599    ETN61899.1    GGFJ01007738    MBW56879.1    GGFJ01007739    MBW56880.1    KQ971345    EFA05071.1    AXCM01000091    ATLV01013476    KE524860    KFB38038.1    EAT43592.1    AXCN02000729    APCN01000637    AAAB01008944    EAU76734.1    CVRI01000055    CRL01474.1    GFDL01010077    JAV24968.1    DS232030    EDS32553.1    GEZM01009822    GEZM01009821    JAV94292.1    AJVK01010182    GFDF01009920    JAV04164.1    AJWK01008028    GANO01002911    JAB56960.1    NNAY01001594    OXU23487.1    APGK01053536    KB741224    ENN72313.1    GDAI01000340    JAI17263.1    GFDL01009009    JAV26036.1    BT128225    KB631749    AEE63186.1    ERL85753.1    CH964182    KRF99251.1    GG666538    EEN57812.1    KZ288427    PBC25907.1    EDW80212.1    CM000157    EDW88155.1    CH480831    EDW45889.1    CM000361    CM002910    EDX04775.1    KMY89874.1    OUUW01000006    SPP81449.1    CH379059    EAL34214.1    CH902624    EDV33243.1    AY069294    AAL39439.1    DS235866    EEB19341.1    CH933807    EDW11282.1    AE014134    AAF53161.1    AAN10802.2    BT132857    AEV12232.1    EZ422641    ADD18917.1    JXJN01025274    CH916368    EDW04038.1    LBMM01019200    KMQ83594.1    GL437593    EFN70284.1    UFQT01001365    SSX30216.1    KA645530    AFP60159.1    JH818976    EKC26424.1    GDKW01000124    JAI56471.1    CH954177    EDV58826.1    ADTU01002487    CCAG010019860    GFDG01001956    JAV16843.1    KQ438551    KOX67202.1    CH940649    EDW64776.1    GDIP01225834    JAI97567.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000053240    + More
UP000027135    UP000008820    UP000069940    UP000249989    UP000235965    UP000000673    UP000075881    UP000007266    UP000069272    UP000075883    UP000075880    UP000076408    UP000030765    UP000075885    UP000075920    UP000192223    UP000075886    UP000076407    UP000075902    UP000075840    UP000075903    UP000075882    UP000007062    UP000075884    UP000183832    UP000002320    UP000075900    UP000092462    UP000075901    UP000092461    UP000002358    UP000215335    UP000019118    UP000030742    UP000007798    UP000001554    UP000242457    UP000085678    UP000002282    UP000001292    UP000000304    UP000078200    UP000268350    UP000001819    UP000007801    UP000192221    UP000009046    UP000009192    UP000092445    UP000000803    UP000005203    UP000092443    UP000092460    UP000095300    UP000001070    UP000036403    UP000000311    UP000095301    UP000005408    UP000008711    UP000005205    UP000092444    UP000053105    UP000008792    UP000091820   

PRIDE

H9JNP0    Q8T9H4    Q8IP97    H0RND5   

Pfam

PF04614   Pex19        + More
PF13419   HAD_2

Interpro

IPR038322   Pex19_C_sf        + More
IPR006708   Pex19       
IPR023214   HAD_sf       
IPR036412   HAD-like_sf       
IPR041492   HAD_2       
IPR023198   PGP-like_dom2       
IPR006439   HAD-SF_hydro_IA       

SUPFAM

SSF56784   SSF56784       

Gene 3D

1.20.120.900     1.10.150.240     3.40.50.1000    

ProteinModelPortal

H9JNP0   A0A3S2NWJ1   A0A2A4K2P2   A0A2W1BGR7   A0A194PZ12   A0A212F1K6   + More
A0A0N1IHV7   A0A2H1VUK4   A0A2H1WKF7   A0A067QRF9   Q1HQH5   A0A023EQ27   A0A2J7RA55   A0A2M4AF94   A0A2M4AFH5   A0A2M3Z423   A0A2M3Z4A6   A0A2M4AFI6   W5JGH7   A0A2M4BUZ9   A0A2M4BUX1   A0A182JZM0   D2A5I0   A0A182F2U0   A0A182LSZ8   A0A182ILD8   A0A182Y9A9   A0A084VJ94   A0A182P5G8   A0A182WA04   A0A1W4WHV8   Q17BF2   A0A182QQC4   A0A182X611   A0A182UGM3   A0A182IB35   A0A182V2X6   A0A182LJZ6   A0NE60   A0A182NT58   A0A1J1IP15   A0A1Q3FBU8   B0WPW5   A0A182R2J2   A0A1Y1N8N8   A0A1B0D140   A0A182T626   A0A1L8DCX4   A0A1B0CDN0   U5ER89   K7IM63   A0A232EYX6   N6T3V9   A0A0K8TSZ6   A0A1Q3FEQ9   J3JYA1   A0A0Q9X151   C3YPM8   A0A2A3E2H6   B4N771   A0A1S3ISW8   B4P1Y4   B4IE62   B4Q3Q0   A0A1A9UL13   A0A3B0K618   Q29NK5   B3MVH8   Q8T9H4   A0A1W4VC02   E0W135   B4KI00   A0A1A9ZD26   Q8IP97   H0RND5   A0A087ZNK5   D3TMI9   A0A1A9XCR1   A0A1B0C460   A0A1I8QD73   B4JBL5   A0A0J7JZX0   E2A8G4   A0A336MIV1   T1PBP4   K1Q532   A0A0P4W0R9   B3N3X4   A0A158NN30   A0A1B0FBW1   A0A1L8EE41   A0A0N0U2J3   B4LSF4   A0A1A9WKW2   A0A0P4ZHX1  

PDB

5LNF     E-value=4.3269e-21,     Score=248

KEGG

101743537    K13337 peroxin-19 | (RefSeq) peroxisomal biogenesis factor 19

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0005777   GO:0016787   GO:0007399   GO:0007031   GO:0008270   GO:0015074   GO:0006355   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR12774  

Length:

291

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00182

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.16107

outside

1  -  291

 

 

Pi

21.227783

Theta

26.395176

Tajima's D

-0.632867

CLR

0.509322

CSRT

0.212639368031598

Interpretation

Uncertain