SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14214
Pre Gene Modal
BGIBMGA011119
Annotation
PREDICTED:_uncharacterized_protein_LOC106142077_[Amyelois_transitella]
Location
Bomo_Chr23(-):20583508-20625082      View in EpiBrowser
Location in the cell
Cytoplasmic   Reliability : 1.924 Nuclear   Reliability : 1.29
 

Sequence

CDS
ATGATGCTGCAGGGTAGCATCGGCTGTAATTCTAGAAGATATTCGTCTACCGCCTGTGGTTCGCAGACCGGTTGCATAGCGGCCGTGTGCAGGGCGCTTTTAGATGAGAAAAGTTCAAAGGAGCTTACCAAGAACGACGTGGATGAAGTGATTGAGGCGGCTGATAGATATTATCACCAGTGCATGCTGGCTATGAAGTGCTATAAGGGAAAACCTCAACTTCAACTGAACCAGCTTCTGACGTCATTCTTCTTTCACGACACGAAGTACACGGTCAAGATGGAACAGGTGGACAAAGGACTCCTGGCCAAGCACCCGGATAACATTCAGGCTGAACTGGATTTGATGACCATGATGGAGAAGCGCGCCGGCACAGCGTACATGATGATATTGACCGTCGGTGGTAACCGTCACTTTTTGATCTGGAGCGAGCTGCCCGAAGCTGGAGGTCAGGTCAAAACCCTCTGCTACATCTTCGACCCGCATATGCTGGACGAGCGAGGGGTGCCGAACAAGCTATACGGAGCCGGGGCGTTTTTGCGTTACGCTGGCGTGTCATCGTTTGTCCTGGACTTTCTGACGAACTATGGCGACTTGGACTCGGCCAAGAAGGGCACACCGAAGCCACCGATAACCCTGACCAACATCGAAGTGGTCCAAAAAGAGCGACTGCTTCGGGAGCCGACCTTCGAGCTTGATTTGAAAGCTCTGAAGATACACTGCCGCAGCGAGTGGGACAACATCAACATTAACGCTCTCATCGAAAAGAAGAGATATGAGGGTAAATATCCTCAAGGTTCCCTCAGTGCGGTGAGCATAGCTACATCAAGAGCCACCTCTAGGAGGAAAGTTAGAGATTTCTACCAGAAGAGCCCTAAAGAGCCTCCGCCGCAGCTGCCGGTGGCTCCAGAGCGTGCACCGGCCGCCATGACCCAAGATCAGATAATGTCCTTGAGAGGAGAAGACTTCTTTCTCTACTGCCCCAGTGTAGACGGACATTTCTATGGCAGAGACGACATGATACCGCGTCCGAAATCGGAGACCGTTCTCCACAGTCCGGTCGAAATAGCCGATAGGAACTATCACTCGCAGTACCAGCAGCTTGACGTTGAGAAGTGGATCTTGCGGGGGACCAGACACATGGCCAGTTTCAGGTACCAAACGTTTAAGACGTATACTGGTGTGGCGTGTTGCGTGGCAGCCCTAGCCATGCTCCGGAGGTACAGGGCTCGAGCCTGGAACGAGGATATTATTGACGAAACCCTGGATCTAGGATACAATCTTTACAGGGAATCTTTGTTGGAAAGAGGCGGTGCTATCAGACAGTTGGTACTTGGAGAGTTGAAGGACACATTTCTCATACGCGACAAGGAATACAAACACAAGCAACGGGGAATAGCGGTCTGGGGGAAAGTTATATCTTCGAGCCCCAACGTCTTGGACCTTTGTCGGGGCGTGGAGACGTTCTTCAAGGAGGCAGACACTGGACTCTTTCAGGTTGGTCTCCGCGAAGACGGTAAGGCTTGCTTGCTGTACTTCACGCGCGTGAGCCGCCTATGCGAGCTACTGACGGAGAGTGCAGGCGACAAGAAGCGGGGCGCGTTCAGTATATCGGACATAAAAGTTTTTCAGCGCGAAGGGATACCACCACCCATTAACAAACTCACACCGGTGGCACCAGGTCGTTGGGTCATCAAGGGCCACTTTCACGAGGGCGATGCCAGGTTTCCGGAGGAGCATCGCAACAAACAGGCCACCCCAACATCGATAGCAGCCATTGCCATGGCGAATGTCGTCAGTCCTGACGAATGGACCCCAGATGACATCGATGAGATTTTAATCAGAGGCGACGTTCTCTATCAAAACACGATGGAACATCTGGAGAAGATGGGCATCGATTTGAACGCTCCTAAACTTGACGAGGAAATGGACGAGGAGGAAGAGGCTCCACCCACCGGAACGCTGTCTGCCATTCACGTAATTAATCGGTTTAAGATAACAGATTACGATTGTATAGAGACTGAAGTTTTCGACAGTATGTACAACGGTCAATTAAATCCTGATACTTCCTCGGGAATGATTTCGCTCAAGGCTTCGTTGGAGGAGTTCTTCAAGGGAAACAGTTACGGCGTTGTGACCGCCAGAGGGGGCTCGATGGCTGTTTGGAAAGGCGAAGACCATCTCTACTTGTTCGAACCCCATGGCTGCGATAATAGTGGATTCCCGTCAGACGAGACAAGAGCAGCAGCGTGCCTCATTAGGTTGAGTGGCGGCGCTTCCGAGCTAGCCGACGCGATCCTAGCTAACCTCTCTCCGGGGTCCGATGACAGCTTCAATATATCTCCCGTCTCCATAACCGCGACGAGGCTGAACATGGCCATCGGAGTTCCTGAAACCAAATTGGAGAGTAAAGCCTTTGAATGGATATCAAAAGGCACCGCTGCCATCTTGAGTGGGCCGCGTGGTGAGAATACCGCCATTGGGAAAGTCGCCACTAAAGTTGGAATCGGGGCAGATGACATGTCGGGTCGAACTCTGGCTTTGCCTTCAGCGGCCGCTTTTGCCGCCGCCACAGAAGCAGTTCCACCACCGTTCATGCATAGAGATCACATTTACAATTTCCTTGATGCCGGTGCGGAATATTATCTGAACCACGTCAAGAAGACTGGCCGTAAAGAAATTAATGTAGAAGACCTTAGCGAGAAGTTTGAGATGGGAGCCAACACTTTCTCTATAGAAATCGGTGAAGCTGTGAAGTTGCCGTTGAGATTGCCAGATGAGCCTGCCGGAGAAGGTGAAGAGGAAGAGTCTGGTGATAAAGATGAGGTGGGAGAAGAGCTGGAAGAAGAGGAAGAGGAAGCACCTATGAAACAAATAAAAGATGCACTGTTCAAACTGTGGAATGACGACACAAAGCCGACGACGATCAGCTTGCTGGTAGGTGATTACCATCAGCTCGGCGTGTGGATGGCGTCGAGCGGGAAAGTCGTTGCGTTTGATCCTGCGCCCACAGTTGGGAAGGGAATGCTGACCGCACAAAGGATCAAGAAAGGTGATGAGCTCCGCCTGCAAAGAATTAAAGATGAAATGGCTGGTGAAGACGCAGGTGGAGATGAGGAGGCGGAAGATGAGGAGGAAGCTGGTGGCGAGGGCGAGGAAGTGCCGGAGCCGGTTCCGGAGTTTGTGCCCCCGGAATCTGCCGCTGCCCTGATGGTGTTCGCGAGCCCGGGGGAGCTCATCGACAAGCTGGTGATCCAAGGGGGCCTCGATCGCAAGCAATGTCTAGCACCGTACAAGCTGTATGGTGTTACCGTGAAGAATGAGCTTAGTTCGGTTCTGAAGGAGAAGAGGCCGAGCTCGAGAGATGACGCGGGAGACGGCGGTGAAGAAGATGAAGAAGAGAGCTTAGTGGAACCACTGGACGACTCCTGCGTGGGGAAGTACATGGACCGCATCAGCCGCGTCCTAGCTTCGGTCAGAGGAAGACTGGCACAAGACGAGGAATTCTTTTTAGAGCATCGGAACAGAGATCACCAGGACGCGGCGAACTCTATAATGGGTATAGTGGTCGAGAACATCGAACCTCACATCCACTGGAAGCCGCAGCTGATCGACGGAATCCTCAAGTACGGAGACAGGGTCCACACGATGTCTCTGCCCAGAGCTTCTGCTCCGCCAGGACTACGCCCCAACGAGATTATCGACCAGTTCCACGTCACCAATTTTAATGTCAGACTAGAGATTGAGAGCGAAGCTGTGACAGGCGAACTGAAAGCTGGAGAAACAGGTGCCGTACTTAACTTGAAGAGAGCCATCAATAGATTCTTTGAAAGCTACAAGCACGGAGTGATTTGCGCTAAGTCATACTGCGTTGCGGTGTGGAAAGCCACAGACGACAAGGCTATTTGCCTGTGGGAGCCTCATGCTGTAGGTCCCAATGGAAGAACGTCTCCTGGAGGGGCGGCGGCCCTCGTCATGTATTCCAATGTCGAAGACCTGGCCAGCACTATAACAAGTAACGTTGAGGGACTGGAGAGACCGGGATCTAACAGGTTCTGCATAACATCTGTGAAAGTGTTTTGGGAGTTTGCCAAGCTGTCGGGTCCGGTATCGCAGCAGGGTAAGGTGCCAGACGAAGGTTACGAGTGGAAGGTGCTGAGCGCGTACGTGGAGACCGCGCGCGGCAAGACCATACTCCGCGGGACCAGACCGCCCGATCTTGTCAAGTTCACGAGGGATGCGTTACTGCAATCATCTTGCGGTGCCATAGTGGCTGCTTGCATGTCTCACGTGAGGCGGCCCCCGCTATGGACACGGAAAACTGTTGATGAGATTATGGCGGTGGCCGGCCACTTGTTCAATGCGTCCCTCGGATCGTTGGGCTACGAATTCAGACCCGGCGAGGACGTGTTGCTGCCATTACAAGTATTGAAACGTTTCATACTGGGCGTGAACTACGTCCGCTACGAACTGGATGCAGTGTACAGCGGGAAGCTCGCGCAGAAGGAGCCCACGGAAATGACCGTCAGATGTGCTCTGGAGCAGTTCTTTGAGGGTCACACGCACGGGATATTGTGGTCGGTGCCGCACGCCGTGGCCGTGTGGCGGGTGGCGGGGTCGCCGCCCTTCTACATGATGGAGCCCCACGCCTGCGGACCAACGGGCCTGAGGGTTGACGCGCAGGACGACGGAGCCGCTTGCGTCATGACCTTCACTTCAGCGAAGATGTTGGCGTTCTCGTACCTCCAGAACGTGCCAGCTACGGAACGACTGAAGCACGACTTCCAACTCTACGCAATGTCGGTCGCTGTTCACCCGATCTCCAAGACGGGCGGAGTCCAGCCGCCTCTGGTGCGGTCGAAACCTGGTCTAGCACTAGTGCCGGCCACCAGCAAGGTCGGTATTGATGGCACGAAGCGTCGCGCTGACGAGAAGGACAGGAAGCATCCGCCGGGGAGCGCCACGTGCTTGGACGCACAACGCGCCTCCGAGCTCCAGGATAAAGCCATGAGCAAACTGAAGGGTCAACGTAACACGAGCGGATGGTTGGTGTTGAACGACGGGACTCAGTACCTGTCGGCCCAGCATTCGATGTCCTGCAGGAAGTTTACGAAAGCTTCCCGTGGATGTCAGGCTTTGGCATGTTCAATAATGGCAGTGGCCATGTCAAGAGTGGAAGACGTGTGCCGTTGGTGCTCGTCCACCCTCGACCAGATTCTGTACAGCGGGGACCAGCTCTACCAGGACAGCTACCTGCACTTTAAGGCCAAATCCAGGATCCTCGGGATCGAACAAATTCTGCGTAAATTCTACACGCCCGGTAACTGCGTGTGTAGAGTCGTCATATACAAAGCGAGGCAGACTGGTGTTGTTGATGGAGATTTGGTCTCGCAGTTGATTGAATTCTTTCGTGAAGAGAGATACGGTGTGTTCGTGGCTGGTAAAGGCGATATAGCTGTTGCACTGTTCAGGACACCCAGAGGGTACTACATGTTCGACCCCGCGGACAGAGATCGCTACGGTCGAGCAGTCCCCCCGCCCTGCACTGGAAGAGCCAGGGCCTGCCTCTCGCAATACCCTAACGTCCAGTCGTTGGCAGAAAAGCTGTATCCTAACATACCGCCCGTCGTCAATGACACTGGACTCGGTGAAGAAGCTGGGACTAAATCTCCACAAACGAAATCGAAGAGCGATTTGGGACGAGATGACGATAAAGAGGTCCGATTCGAGCAGCCAGCCACATTCTTTATATACGGAATGGACGTTACAAGTCTACGTAGACTTAATTATCACGAGAAGTGA
Protein
MMLQGSIGCNSRRYSSTACGSQTGCIAAVCRALLDEKSSKELTKNDVDEVIEAADRYYHQCMLAMKCYKGKPQLQLNQLLTSFFFHDTKYTVKMEQVDKGLLAKHPDNIQAELDLMTMMEKRAGTAYMMILTVGGNRHFLIWSELPEAGGQVKTLCYIFDPHMLDERGVPNKLYGAGAFLRYAGVSSFVLDFLTNYGDLDSAKKGTPKPPITLTNIEVVQKERLLREPTFELDLKALKIHCRSEWDNININALIEKKRYEGKYPQGSLSAVSIATSRATSRRKVRDFYQKSPKEPPPQLPVAPERAPAAMTQDQIMSLRGEDFFLYCPSVDGHFYGRDDMIPRPKSETVLHSPVEIADRNYHSQYQQLDVEKWILRGTRHMASFRYQTFKTYTGVACCVAALAMLRRYRARAWNEDIIDETLDLGYNLYRESLLERGGAIRQLVLGELKDTFLIRDKEYKHKQRGIAVWGKVISSSPNVLDLCRGVETFFKEADTGLFQVGLREDGKACLLYFTRVSRLCELLTESAGDKKRGAFSISDIKVFQREGIPPPINKLTPVAPGRWVIKGHFHEGDARFPEEHRNKQATPTSIAAIAMANVVSPDEWTPDDIDEILIRGDVLYQNTMEHLEKMGIDLNAPKLDEEMDEEEEAPPTGTLSAIHVINRFKITDYDCIETEVFDSMYNGQLNPDTSSGMISLKASLEEFFKGNSYGVVTARGGSMAVWKGEDHLYLFEPHGCDNSGFPSDETRAAACLIRLSGGASELADAILANLSPGSDDSFNISPVSITATRLNMAIGVPETKLESKAFEWISKGTAAILSGPRGENTAIGKVATKVGIGADDMSGRTLALPSAAAFAAATEAVPPPFMHRDHIYNFLDAGAEYYLNHVKKTGRKEINVEDLSEKFEMGANTFSIEIGEAVKLPLRLPDEPAGEGEEEESGDKDEVGEELEEEEEEAPMKQIKDALFKLWNDDTKPTTISLLVGDYHQLGVWMASSGKVVAFDPAPTVGKGMLTAQRIKKGDELRLQRIKDEMAGEDAGGDEEAEDEEEAGGEGEEVPEPVPEFVPPESAAALMVFASPGELIDKLVIQGGLDRKQCLAPYKLYGVTVKNELSSVLKEKRPSSRDDAGDGGEEDEEESLVEPLDDSCVGKYMDRISRVLASVRGRLAQDEEFFLEHRNRDHQDAANSIMGIVVENIEPHIHWKPQLIDGILKYGDRVHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESEAVTGELKAGETGAVLNLKRAINRFFESYKHGVICAKSYCVAVWKATDDKAICLWEPHAVGPNGRTSPGGAAALVMYSNVEDLASTITSNVEGLERPGSNRFCITSVKVFWEFAKLSGPVSQQGKVPDEGYEWKVLSAYVETARGKTILRGTRPPDLVKFTRDALLQSSCGAIVAACMSHVRRPPLWTRKTVDEIMAVAGHLFNASLGSLGYEFRPGEDVLLPLQVLKRFILGVNYVRYELDAVYSGKLAQKEPTEMTVRCALEQFFEGHTHGILWSVPHAVAVWRVAGSPPFYMMEPHACGPTGLRVDAQDDGAACVMTFTSAKMLAFSYLQNVPATERLKHDFQLYAMSVAVHPISKTGGVQPPLVRSKPGLALVPATSKVGIDGTKRRADEKDRKHPPGSATCLDAQRASELQDKAMSKLKGQRNTSGWLVLNDGTQYLSAQHSMSCRKFTKASRGCQALACSIMAVAMSRVEDVCRWCSSTLDQILYSGDQLYQDSYLHFKAKSRILGIEQILRKFYTPGNCVCRVVIYKARQTGVVDGDLVSQLIEFFREERYGVFVAGKGDIAVALFRTPRGYYMFDPADRDRYGRAVPPPCTGRARACLSQYPNVQSLAEKLYPNIPPVVNDTGLGEEAGTKSPQTKSKSDLGRDDDKEVRFEQPATFFIYGMDVTSLRRLNYHEK

Summary

Uniprot
H9JNL5   A0A2A4K1N2   A0A212FG62  
Pubmed
19121390    22118469   
EMBL
BABH01035152    BABH01035153    BABH01035154    NWSH01000230    PCG78175.1    AGBW02008707    + More
OWR52724.1   
Proteomes
UP000005204    UP000218220    UP000007151   
PRIDE
H9JNL5   
Pfam
PF00355   Rieske
Interpro
IPR036922   Rieske_2Fe-2S_sf        + More
IPR017941   Rieske_2Fe-2S       
SUPFAM
SSF50022   SSF50022       
Gene 3D
2.102.10.10    
ProteinModelPortal
H9JNL5   A0A2A4K1N2   A0A212FG62  

Ontologies

KEGG
101735788    no KO assigned | (RefSeq) uncharacterized LOC101735788
GO
GO:0051537   GO:0016491  

Topology

Length:
1933
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.26189
Exp number, first 60 AAs:
0.00753
Total prob of N-in:
0.01023
outside
1  -  1933
 
 

Population Genetic Test Statistics

Pi
27.593929
Theta
24.626381
Tajima's D
0.248466
CLR
0.759561
CSRT
0.446427678616069
Interpretation
Uncertain
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