SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14208
Pre Gene Modal
BGIBMGA011143
Annotation
hypothetical_protein_RR48_05615_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 4.62
 

Sequence

CDS
ATGAATTTTTTGAGCCGTGAAATGCGCGTCAGACACGATCCGCAGTATTTCAAACAAAATTGTTATACCAACGGAAAATACCACACGGATGCCCTGAATGATAGCGATATGAAGAGTGTGTACGGTGAGGAATTGTTCAATAAATTGCATACACTACCCGATCCATTGATGAAGAATCTTGGTGACACATTAGCCATGAATATGACCGAAGGTGAAAAAGTCAAGAGTCAAGAGAATAAAATTGGTGGCGAATCGACTCTATCGGGTATTACTGGGTTTTTTAGCGGTATGATGAGCACTCTCGCTGGCGTCATGTTCCGTAGGTCGAAACCGTCAGATATCTATCAAGGGACACTGCCACAAACCTGGCAGGATTCCAAAAGTGACTACAAAAACATTCTTAATATCACGGACAAAACACCGAACACAGTCACTGATTTATCTGACAATAAAACGGATGACAGTAACATTGACAAGTTATTCCCAATTATGATTACAAATAAAGAATGTAAAGAGGCAACAGATCAGAAGTTGTATGCCGAGTCCAGTTCTGTCGACGAGTCATTTGAGGATGCTTTCTCACCTGAAGATTTTATGAGGTTAACGCAAAGCGCATTTATTGAATACTATATCCCCTCACAAAATCATAAAGAGGAGTTTTTGGAAATCGAAACACCTAAAATTAAAGTTGAGTTCTCTAAGATGCCCGAACACAATTTAGTTTCTCAATCACATCAGACCAAGGAAAATACTGGAAATGTGACAGAAAAAGATCCCAATTATGATTTGGTCACATCCTGTGAAGACAAATTAAAAAAAATCAGAGCATTACTACAGAACAGACGTCGGAACAAAACACATATAGACACCGAGGGTATTGAGGATATTAAATCCAGAAGAAAACAAGAACTATTTCCTGGTATGCCTGACGACAGCATTGAAAATTCCACTGACACCAGCCTGAATGTAAACATTAATGAAAATTTGAATTTTGGTGAAGAAGTTGATGTCAATTCCAGTACTGGAAGCTCACCGCTGCTTAAAGCTTTGGAAAAGTCTGAACTTGTCATTGAACCGGATGAAAGCTTTGATGAGGTTTCGGGTCGTTTTCATAAAGCTTCAACGTCCAGCGAGGACTCCTTCCAAATTGTCTTCAACGATGTCCCTCGTACAAGAAGAACATCGGAATGCGATTCTGAAGACTCCTTCATTGTATTTGAAGACAATCCCGACGATTGTTATACCACAAACGATATATTCGGTGATTCTGATTCTGATACGGACTCTAGTGATTCTGAAAGTGATTGTTGCGATTTGTACTTGTCAAAGACTGTGAAGAATTTGACCGATGACAGTTTGTACGATGAAGTTGATTATGGAAGGATTCTCTCATGCTCTGAAGTGTGCCCTGACAAATTTGAAGAATACAAGAAGCATGCTGCAAAGAAAGACCGGCCAGTTAAAAGGGTAACATTTTCCGATGAGCCTCCGAAGGTGCATGTGATGAGAGTGTGGGCGTTCGCGGCCCGCCAGGCCAGGGCTGGTCACTGGGAGAGATACGCCCTCGATCGCGAAAGATTTAAAAGGAGAATCGCCGACGTCGAGATGGCCGTGTCGTGGGTGCTGAAGCCGCAGCACCGCTCGAGGGTCATGTTCCAGAGGTTCATGCCGTGGTGGAACGCGGAGGATCGCAGGCAGCTAGCGGAGAACTCGCAAGAGCAGGACGCAGCGACGGATAGAGACAGCAAGTCCGACAAAACCAGAGCGATCGAGGGGAGATTGGCAAAACCTGATACTGGTCCCGAAACTAGCGGTGACTGTCCACCAAACGAGGAGGATTCTGGTAATATTAGAACCGTTCACAATGACGGAGACGAGGCAAATGCTCAACTAGATAACGGCGCCCACAGCGGAAACAGTCTAGAAATACTTTCGGAAAAGCAAAACGAACACACGGCAATGGATAGCGAAATTTGTGAATCGGTAATCAATGAAGTCGGAAAACATTACTTGGGAACTACATCAGAATCGAGTGCTCAAAAATTTGAAGGCGTATGA
Protein
MNFLSREMRVRHDPQYFKQNCYTNGKYHTDALNDSDMKSVYGEELFNKLHTLPDPLMKNLGDTLAMNMTEGEKVKSQENKIGGESTLSGITGFFSGMMSTLAGVMFRRSKPSDIYQGTLPQTWQDSKSDYKNILNITDKTPNTVTDLSDNKTDDSNIDKLFPIMITNKECKEATDQKLYAESSSVDESFEDAFSPEDFMRLTQSAFIEYYIPSQNHKEEFLEIETPKIKVEFSKMPEHNLVSQSHQTKENTGNVTEKDPNYDLVTSCEDKLKKIRALLQNRRRNKTHIDTEGIEDIKSRRKQELFPGMPDDSIENSTDTSLNVNINENLNFGEEVDVNSSTGSSPLLKALEKSELVIEPDESFDEVSGRFHKASTSSEDSFQIVFNDVPRTRRTSECDSEDSFIVFEDNPDDCYTTNDIFGDSDSDTDSSDSESDCCDLYLSKTVKNLTDDSLYDEVDYGRILSCSEVCPDKFEEYKKHAAKKDRPVKRVTFSDEPPKVHVMRVWAFAARQARAGHWERYALDRERFKRRIADVEMAVSWVLKPQHRSRVMFQRFMPWWNAEDRRQLAENSQEQDAATDRDSKSDKTRAIEGRLAKPDTGPETSGDCPPNEEDSGNIRTVHNDGDEANAQLDNGAHSGNSLEILSEKQNEHTAMDSEICESVINEVGKHYLGTTSESSAQKFEGV

Summary

Pfam
PF10488   PP1c_bdg
Interpro
IPR019523   Prot_Pase1_reg-su15A/B_C       
PDB
4V0U     E-value=0.0054793,     Score=96

Ontologies

GO

Topology

Length:
685
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.34671
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11023
outside
1  -  685
 
 

Population Genetic Test Statistics

Pi
15.077769
Theta
14.097039
Tajima's D
0.725034
CLR
1.936423
CSRT
0.592820358982051
Interpretation
Uncertain
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