Gene

KWMTBOMO14186  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011131

Annotation

NADH_dehydrogenase-ubiquinone_Fe-S_protein_2_[Bombyx_mori]

Location

Bomo_Chr23(-):20038114-20045281      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.891 Mitochondrial   Reliability : 2.28

CDS

ATGGCCTCCCTTCTCAATGTTTTGTTGCGAAAATCTCCTAATTTCGGCCAAAAATCGGTCTTATTAAAGAACATTCCCGCTGTTCATAATGTGAACTCCCAAAGAGATGGGCACCGTTGGTTCCCTGATCCAGACTTTGTGAAACAATTTGAAGGGCCAGTCATGTATCCTGATGAGTCGACCAAATCATTGAAACCTGTTCCTTATAACAGCATCATAAAACCGGCCGAAAAGAAAGTACGCAACATGATCCTGAACTTCGGGCCCCAGCATCCAGCCGCTCACGGGGTGCTGCGTCTCGTACTGGAACTGGACGGAGAGACAGTCCGTGCAGCAGATCCTCACATAGGTCTCCTGCACCGTGGTACTGAAAAACTGATCGAATACAAGACATACACCCAAGCCCTGCCGTACTTCGACCGTCTGGACTACGTGTCCATGATGTGCAACGAGCAGTGCTACAGTCTGGCCGTCGAGAAGCTGCTGAACATCGATGTTCCTCTGCGGGCCAAGTACATCAGAACTCTGTTTGCGGAGATAACCCGCCTACTGAACCACATCATGGCGGTCGGCACGCACGCGCTCGACGTGGGGGCGCTCACTCCCTTCTTCTGGCTGTTTGAGGAGAGAGAGAAGATGATGGAGTTCTACGAGAGAGTCAGCGGCGCCAGGATGCACGCCGCCTACATCAGACCAGGAGGGGTTTCGCTTGACATGCCGCTGGGTCTGATGGACGACATCTACGAGTTCTCGTCGAAGTTCGCCGAGCGCATCGACGAGGTGGAGGACGTGCTCACCACCAACAGGATCTGGGTGCAGCGGACCAAGGACATCGGCGTGGTCACTGCGCAGGACGCGCTCAACTACGGCTTCAGCGGTGTGATGCTGCGGGGCTCCGGCATCAAGTGGGACCTCCGCAAGACGCAGCCCTACGACGCCTATCCCTTCGTCGAGTTCGACGTGCCCATAGGGACGCACGGCGACTGCTACGATAGGTACTTGTGTCGCGTCGAGGAGATGCGCCAGTCCCTCCGCATCATCGAGCAGTGCCTCAACGACATGCCCCCCGGGGAGGTCAAGACCGACGACGCCAAGCTCACCCCGCCCTCCCGGGAGGAGATGAAGACGTCCATGGAGGCGCTGATCCACCACTTCAAGCTGTTCACGCAGGGCTACCAGGTGCCGCCGGGCTCCACCTACACCGCCGTGGAGGCTCCCAAGGGGGAGTTCGGGATCTACCTCGTCTCCGACGGAGGCTCCAAGCCGTACAGATGCAAGATCAAGGCGCCGGGCTTCGCGCACCTGGCGGCGCTGGAGAAGATCGGCAGGAACTCCATGCTGGCGGACATCGTGGCCATCATCGGGACCCTCGACGTGGTCTTCGGGGAGATCGACCGGTAG

Protein

MASLLNVLLRKSPNFGQKSVLLKNIPAVHNVNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAEKKVRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNHIMAVGTHALDVGALTPFFWLFEEREKMMEFYERVSGARMHAAYIRPGGVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLNDMPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIYLVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGTLDVVFGEIDR

Similarity

Belongs to the complex I 49 kDa subunit family.

Uniprot

Q1HQ80   A0A2W1BJF4   A0A2A4IYD3   A0A3S2LWJ9   W8S0Q1   S4NXW7   + More
A0A194PSU9   A0A212FJU2   H9JNM7   W8BPS0   A0A034WIL4   A0A0K8U9R6   A0A2M4A5Q1   A0A084WPL7   A0A182HFH3   A0A1W4V5B6   A0A182JHJ2   B4JZW3   A0A2M4A5R4   I4DNK1   D2A579   B3P9S8   A0A182FIL8   Q16Q68   B4NHW8   A0A2M3Z2M7   A0A2M3Z2Q1   Q9V4E0   A0A2M4BM20   T1E9X3   B5DTD6   A0A3B0KUM6   U5EVJ5   B4L7B6   B4PW13   A0A182PM65   B4IIX1   A0A0J9S0T2   B4H874   A0A182LZ26   A0A182XY39   A0A182I9M2   A0A182X5B3   A0A0M4ETC2   A0A182TTJ2   A0A1J1HIR6   A0A182UZE7   T1PH29   W5JI89   A0A182N0Z0   A0A182QSH7   A0A1Q3FM55   A0A0K8TTI9   B0WWS9   B4MF01   A0A182KFB3   A0A1I8P7E3   A0A1L8EJC6   B3N044   A0A182IKS4   F5HJY7   A0A1B0CDK6   A0A182RJ19   A0A182VVB4   A0A182MPT1   A0A3B0K8N8   A0A1L8E0G2   V5GWA2   A0A1A9WEW4   A0A1L8E0L2   A0A182WBD4   J3JUS9   A0A084VY01   A0A182K1D4   A0A182PIN9   A0A1W4X418   A0A1B0BFM9   A0A1A9ZL17   A0A1A9XFD2   D3TR12   A0A182V7Y6   A0A336M652   A0A182I6L0   A0A182L3U2   A0A1A9V8L5   Q7PTG6   A0A1Y1MKB5   A0A182WWD1   N6TVB5   A0A023EU66   A0A1B6C2M5   A0A0T6AX38   A0A182Y825   A0A182UDY9   U4U242   A0A1D2NDE4   A0A023FA96   A0A182LD64   A0A224XC61   A0A146LBH5  

Pubmed

28756777    23622113    26354079    22118469    19121390    24495485    + More
25348373    24438588    26483478    17994087    22651552    18362917    19820115    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    17550304    22936249    25244985    25315136    20920257    23761445    26369729    18057021    20479145    12364791    14747013    17210077    22516182    20353571    20966253    28004739    23537049    24945155    27289101    25474469    26823975   

EMBL

DQ443172    ABF51261.1    KZ150147    PZC72870.1    NWSH01004637    PCG64835.1    + More
RSAL01000156    RVE45606.1    KF994920    AHL83459.1    GAIX01011992    JAA80568.1    KQ459593    KPI96387.1    AGBW02008219    OWR53996.1    BABH01035080    GAMC01005613    JAC00943.1    GAKP01004790    JAC54162.1    GDHF01029219    JAI23095.1    GGFK01002806    MBW36127.1    ATLV01025101    KE525369    KFB52161.1    JXUM01036889    KQ561109    KXJ79679.1    CH916380    EDV90979.1    GGFK01002798    MBW36119.1    AK402977    BAM19491.1    KQ971345    EFA05697.1    CH954184    EDV45241.1    CH477759    EAT36538.1    CH964272    EDW83618.1    GGFM01002004    MBW22755.1    GGFM01002048    MBW22799.1    AE014135    BT032847    AAF59336.2    ACD81861.1    AGB96554.1    GGFJ01004850    MBW53991.1    GAMD01001523    JAB00068.1    CH475843    EDY71141.2    OUUW01000017    SPP89021.1    GANO01001832    JAB58039.1    CH933813    EDW10910.2    CM000161    EDW99318.1    CH480845    EDW50912.1    CM002916    KMZ07247.1    CH479221    EDW34874.1    AXCM01009391    APCN01001005    CP012527    ALC48135.1    CVRI01000004    CRK87450.1    KA647440    AFP62069.1    ADMH02001172    ETN63841.1    AXCN02001373    GFDL01006441    JAV28604.1    GDAI01000132    JAI17471.1    DS232152    EDS36190.1    CM000831    CH940665    ACY70475.1    EDW71102.1    GFDG01000045    JAV18754.1    CH902639    EDV33552.1    AAAB01008847    EAA06952.3    EGK96602.1    EGK96603.1    AJWK01007963    AXCM01009889    SPP89022.1    GFDF01001866    JAV12218.1    GALX01003958    JAB64508.1    GFDF01001865    JAV12219.1    BT126994    AEE61956.1    ATLV01018235    KE525226    KFB42845.1    JXJN01013592    CCAG010006472    EZ423864    ADD20140.1    UFQT01000445    SSX24369.1    APCN01003658    AAAB01008807    EAA03959.4    GEZM01028984    JAV86171.1    APGK01050477    APGK01050478    KB741174    ENN73220.1    GAPW01001644    JAC11954.1    GEDC01029535    JAS07763.1    LJIG01022656    KRT79413.1    KB631091    KB631092    ERL84090.1    ERL84096.1    LJIJ01000079    ODN03287.1    GBBI01000869    JAC17843.1    GFTR01006449    JAW09977.1    GDHC01014093    JAQ04536.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000007151    UP000005204    UP000030765    + More
UP000069940    UP000249989    UP000192221    UP000075880    UP000001070    UP000007266    UP000008711    UP000069272    UP000008820    UP000007798    UP000000803    UP000001819    UP000268350    UP000009192    UP000002282    UP000075885    UP000001292    UP000008744    UP000075883    UP000076408    UP000075840    UP000076407    UP000092553    UP000075902    UP000183832    UP000075903    UP000095301    UP000000673    UP000075884    UP000075886    UP000002320    UP000008792    UP000075881    UP000095300    UP000007801    UP000007062    UP000092461    UP000075900    UP000075920    UP000091820    UP000192223    UP000092460    UP000092445    UP000092443    UP000092444    UP000075882    UP000078200    UP000019118    UP000030742    UP000094527   

PRIDE

Q1HQ80    H9JNM7    Q9V4E0   

Pfam

PF00346   Complex1_49kDa        + More
PF15031   DUF4528

Interpro

IPR029014   NiFe-Hase_large        + More
IPR038290   NADH_Q_OxRdtase_suD_sf       
IPR014029   NADH_UbQ_OxRdtase_49kDa_CS       
IPR022885   NDH1_su_D/H       
IPR001135   NADH_Q_OxRdtase_suD       
IPR029245   DUF4528       
IPR036728   PBP_GOBP_sf       

SUPFAM

SSF56762   SSF56762       

Gene 3D

1.10.645.20     1.10.238.20    

ProteinModelPortal

Q1HQ80   A0A2W1BJF4   A0A2A4IYD3   A0A3S2LWJ9   W8S0Q1   S4NXW7   + More
A0A194PSU9   A0A212FJU2   H9JNM7   W8BPS0   A0A034WIL4   A0A0K8U9R6   A0A2M4A5Q1   A0A084WPL7   A0A182HFH3   A0A1W4V5B6   A0A182JHJ2   B4JZW3   A0A2M4A5R4   I4DNK1   D2A579   B3P9S8   A0A182FIL8   Q16Q68   B4NHW8   A0A2M3Z2M7   A0A2M3Z2Q1   Q9V4E0   A0A2M4BM20   T1E9X3   B5DTD6   A0A3B0KUM6   U5EVJ5   B4L7B6   B4PW13   A0A182PM65   B4IIX1   A0A0J9S0T2   B4H874   A0A182LZ26   A0A182XY39   A0A182I9M2   A0A182X5B3   A0A0M4ETC2   A0A182TTJ2   A0A1J1HIR6   A0A182UZE7   T1PH29   W5JI89   A0A182N0Z0   A0A182QSH7   A0A1Q3FM55   A0A0K8TTI9   B0WWS9   B4MF01   A0A182KFB3   A0A1I8P7E3   A0A1L8EJC6   B3N044   A0A182IKS4   F5HJY7   A0A1B0CDK6   A0A182RJ19   A0A182VVB4   A0A182MPT1   A0A3B0K8N8   A0A1L8E0G2   V5GWA2   A0A1A9WEW4   A0A1L8E0L2   A0A182WBD4   J3JUS9   A0A084VY01   A0A182K1D4   A0A182PIN9   A0A1W4X418   A0A1B0BFM9   A0A1A9ZL17   A0A1A9XFD2   D3TR12   A0A182V7Y6   A0A336M652   A0A182I6L0   A0A182L3U2   A0A1A9V8L5   Q7PTG6   A0A1Y1MKB5   A0A182WWD1   N6TVB5   A0A023EU66   A0A1B6C2M5   A0A0T6AX38   A0A182Y825   A0A182UDY9   U4U242   A0A1D2NDE4   A0A023FA96   A0A182LD64   A0A224XC61   A0A146LBH5  

PDB

6G72     E-value=0,     Score=1887

KEGG

732900    K03935 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2 1.6.99.3] | (RefSeq) NADH dehydrog

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016651   GO:0051287   GO:0048038   GO:0006120   GO:0003954   GO:0005739   GO:0005747   GO:0005549   GO:0005515   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930   GO:0055114  

Length:

466

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.69417

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03345

outside

1  -  466

 

 

Pi

15.749772

Theta

15.884976

Tajima's D

-1.010105

CLR

0.835579

CSRT

0.133393330333483

Interpretation

Uncertain