Silkworm Genome Informatics Database

Gene

KWMTBOMO14183

Annotation

PREDICTED:_uncharacterized_protein_LOC106707304?_partial_[Papilio_machaon]

Location

Bomo_Chr23(-):19975641-20008981 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.641

CDS

ATGGCCAATCAAATGCCAATTTACAGTCAGGTTGTGCCAAAAAGCCAGTACAAGCCGAAGAGCTCGAAGGCACGTCAGAACCTCACGAAACCGGACTTCGATCCTTTGAATTGTAACAACGGCGGTAATTTTGCGAACGCCGACGGGAAAATCGATAAGGAAAAGAAAGAGAAGAGGGAAGCTAGGAGGGAAGGGAAGAGAGTTAAGAATGAGGGCAGCGAAGGAAAGGTGGAAGCTTACTTGAGGCAGTACCAGGTCAGCATGAGGCAGCAGCAGCACCGCCATTCGTCCGTCAGGCAGGCCGAACATCGTGTTAATCTCAGATCTCTTCCTCTAAATGAAGGCGTCACGTCCGTTCGCGGTCACGAACGCACGCCGACTGAACGCCACCGAGGTTTCCCATGCGACAGAGAAGGCGGTAGGGAACATCGTCGCGAGAGAGACAAAGACAGGGATAGAGATAATTTTGATGCCGACGGAGCACAGCTGAGTCCGTCGGCTCCTCGCGACAAGGACCCACGTCCGATGCGTAAGTCTTCGTCATCGAATCGCGTGCCCGAAGCCGCGACCTCGACCGACAAACGACGGTTCTTCTGCAGGGAGTGGGCGTTTCAGAAGATCGCTCACTGTCTCGAACAGCGACCGGTCAGCAAGACTTGCGGCGTGCTGGTTCTCGGTAATGCGGGCAGCGGAAAGACTGCACTTTGTCAAGAGCTTAGCGAGCCGGGTCAAGGTCCTCAAGCGAGGCAGCAGAGGGCATTGAACCGGAGATTGCTAGCCAGGCATTTCTTGCAGAGCAACACGGAGAGCAGCCTTCGTCCTGGTGAGTTCGTTCGGTCGCTGGCGATGCAGATCCTCAGCCATTCGTCGCGGCGCGCGCTGCCCGGCGCCGGTGGGGACTCGCCCGACGACAGGAACAATTCAGAAGAAGAACGTCTTATCAGCCGTTTCCGGGAGCTGGGCGACGAGAACGAAGAAAGCTCTAAGCCTCTTCTAGCCGACAGCGAAGATCAACGTACGGACGAGGAAGAAACTGGTAGCGCCAGACGAACTCGAACCATTGACCGGATACACGAGAGGGAAGCGTATCTGGATTCAATGATCGACGATGCCTCTTTGAGCGCCGTTGACGATGTAAGCTTATGA

Protein

MANQMPIYSQVVPKSQYKPKSSKARQNLTKPDFDPLNCNNGGNFANADGKIDKEKKEKREARREGKRVKNEGSEGKVEAYLRQYQVSMRQQQHRHSSVRQAEHRVNLRSLPLNEGVTSVRGHERTPTERHRGFPCDREGGREHRRERDKDRDRDNFDADGAQLSPSAPRDKDPRPMRKSSSSNRVPEAATSTDKRRFFCREWAFQKIAHCLEQRPVSKTCGVLVLGNAGSGKTALCQELSEPGQGPQARQQRALNRRLLARHFLQSNTESSLRPGEFVRSLAMQILSHSSRRALPGAGGDSPDDRNNSEEERLISRFRELGDENEESSKPLLADSEDQRTDEEETGSARRTRTIDRIHEREAYLDSMIDDASLSAVDDVSL

Uniprot

A0A2H1WFH1 A0A0N1PJD0 A0A2W1BR30 A0A2A4J5Q1 A0A194RHS9 A0A194PUB7 + More

Pubmed

26354079 28756777

EMBL

ODYU01008301 SOQ51767.1 LADJ01060148 KPJ21609.1 KZ149991 PZC75597.1 + More
NWSH01003043 PCG67066.1 KQ460152 KPJ17383.1 KQ459593 KPI96349.1

Proteomes

UP000053240 UP000218220 UP000053268

Pfam

PF13191 AAA_16 + More
PF12796 Ank_2

Interpro

IPR041664   AAA_16        + More
IPR020683   Ankyrin_rpt-contain_dom
IPR036770   Ankyrin_rpt-contain_sf
IPR002110   Ankyrin_rpt

SUPFAM

SSF48403 SSF48403

Gene 3D

1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

A0A2H1WFH1 A0A0N1PJD0 A0A2W1BR30 A0A2A4J5Q1 A0A194RHS9 A0A194PUB7 + More

KEGG

105842919 K21440 ankyrin repeat domain-containing protein 50 | (RefSeq) uncharacterized LOC105842919

GO

Length:

381

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01466

outside

1 - 381

Pi

20.906158

Theta

18.913763

Tajima's D

-1.193575

CLR

1.249899

CSRT

0.0993950302484876

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics