Silkworm Genome Informatics Database

Gene

KWMTBOMO14181 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011132

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_ankyrin_repeat_domain-containing_protein_50-like_[Bombyx_mori]

Location

Bomo_Chr23(-):19940608-19970681 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.096 Nuclear Reliability : 1.347

CDS

ATGAATGCTGCGAATGAATTGATATTTCTAGTTCTGGACGGTGTCGCAGACGGCTTCATAGCTCTTCGTGAGATTAGGGAAATACCCAGCACTCTGAACGGATTGTATCTGTGGCTGGCGCAGAGACTGTTCCATGGGAGACGATTCGCTAAGGTTCGTCTCCTGCTGGACGTGCTGCTGGCGGCTCGGTGCGGGGTCACGGAGGAGATGCTCTACAAATGTCTGCTCACGAAGGAATACAGTGTAACACGAGAAGATTTCAATAGAAGAATTCACTTGCTCAGGAGAATCCTGGTGATTGAGAAGAGCACGGGCTACCTGTCGATATTCCACCACTCGTTCTCTTGCTGGCTGCTGGACGTCAAGCACTGCACGCGGCGGTACCTGTGTTGCCTGGCGGATGGGCACGCCGCGCTCGCCATGTACTACACACTCATAGCGAAACGCCTGTCGGCGCTGGAGATCCACAACTACGTGTACCACATGACGCGGCTGGAGCATCATCTGTCGTCGCTGAATAAGAGCAGAGGTGATCAGGATGGGCCGGTCGATCTGCACACTTTGGTCTTGTTGTGGGTGTTGGATTCTTCGTGCGACGTCGAGTCGGCCCTCAAGAACGAGGTCCGGAGACTGGACATGTCGCAGAAAACTGAAGCGAGCCACGTCGAAGAGTCGAGCGGGAGGGAGGAGAACGCGCAAACTACAGATTCCGCCTCAATTGAGTCAATAATGCCGGAGCTGATCAGCGGAGCCCCAGTCGCTTGGTGCAAAGACAAGCGGGTCGCGAGGGCGCTCTACGAACTAGCTAAAGGTCCGGCCCTGCTCGACCCCAGCGACGTCGGAGCCGGAGAGGTGATAATAGAGCAGTCGAACGAGGATGAGGTCCCACAGGAATCTTGTGAGGAACGAGAGGATCCCATAGTCCTGGATCCGAATATCATCCACGAGCTGGTCGCTAGGGCGTCACCCGGAGCTGGTGGGCGCGGGGGCGGTGGGGAGGCGGGGCTGCAGGCGGCGGCGGCGCGCGGGCGGGCGGGCTGCGCGCTGGCCCTGCTGCGTGCGGGGGCGGCGCCCGACGTGCCTGACGCTGACGGCTGGAGCCCGCTCCGAGCCGCCGCCTGGGCTGGACACACCGAGGTTGTGGACGTGCTGCTGGAGTACGGATGTGACGTCGATTGTGTGGACGCGGACAACCGGACCGCGCTGAGGGCGGCGGCGTGGTCCGGCCACGAGGCGGTGGTCTCCCGGCTGCTGGCCGCCGGCGCAGCCCCGGACCGCGCGGACGCGGAGGGCCGCACGGCGCTGATAGCCGCCGCGTACATGGGGCACGCCGAGATCGTGAGGGCGCTGCTGGACGCCGGGGCCCGCGTGGACCACGCCGACGAGGACGGTCGCACGGCGCTGGCGGTGGCGTCGCTGTGCGCGGGCGGCGCGGCGTGCGCGGCGCTGCTGCTGGAGCGCGGCGCTGACGTCACGGCGCACGACCGCGACCACGCCACGCCGCTGCTCGTCGCCGCCTTCGAGGGTCACACCGAGATCTGCGAGTTGCTGCTGGAGGCGGAGGCGGACATCGAGGCGTGCGACGGCGCCGGGCGCACCGCGCTGTGGGCGGCGGCGTCGGCCGGGCACGCCGACACCGTGCGCCTGCTGCTGTTCTGGGGCGCCTGCGTGGACGGCATGGACGCCGAGGGCCGCACCGTGCTGTGCACCGCCGCCGCGCAGGGCAACGTGGAAGTGGTGCGGCAACTCCTCGACCGCGGCCTGGACGAGCACCACCGTGACAACTCCGGGTGGACGCCCCTGCATTACGCCGCTTTTGAAGGTCACATCGAAGTGTGCGAAGCGTTACTAGAGGCAGGCGCTAAGGTGGACGAGGCCGACAACGACGGTAAGGGGGCGCTGATGCTGGCCGCCCAGGAGGGACACACCAGGCTGGTGGAGATCCTCGTGGACGACTGGGGGGCGCCCGTCGACCAGAGAGCTCACGACGGGAAGACCGCTTTAAGGCTGGCTGCTCTGGAGGGCCAGTTCTCGACGGTGTCGGCGCTGCACGCGCGCGGCGCGGACGCGGACGCCGTGGACGCGGACCGGCGCAGCACCCTGTACGTGCTGGCCCTCGACAACCGCCTCGCCATGGCGCGCTTCCTGCTGACCTCCTGCGGCGCCAGCGTGCACACGGCCGATGCTGAGGTTCGGACTCCCTTGCACGTATCAGCGTGGCAGGGTCACACCGACATGGTGAATTTGCTGATCACAGTAGGAGGGGCGCGCGCGGACGGGCGGGACGCGGCGCGGCGCACGGCGCTGCACGCGGCGGCGTGGCGCGGGCGGCGGGCGGCGCTGCACGCGCTGCTGCGGCACGGCGCCGACCCCTCCGCACTGTGCTCGCAGGGAGCCACGCCGCTAGGTATAGCGGCCCAGGAAGGTCACGAGGAGTGCGTCCTGTATTTGCTGCAGTATGGCGCTGATCCCCAGCAGACCGACCACTGTGGTCGGACGCCTGCGAAAGTCGCCTGGCGGGCGGGCCACGCGAACATATGTCGCTTGTTGGAACGGTGGCCGACGGTCAGCGAACAGCTACCACCGACGGCGCCGCCGCTGGCCGCCAGAACGCCCAGTGCTGGCTCACCGGAGTTCAAACGCCGCAGCGTCCATAGTTCGAACTCGACCAAATCCTCGTCGAACCTGACCGGGGGCTCGCACCCGTCGCACGAGCCCGAGCCGCCCGCGGAGCCCCACGACAAGGGCCGCGCGAGTCTGTCGTTCGCGCAGCAAGTGGCGCGCTGCGGGCGGCCGCGCCGCGGGCGCGAGCGGGACAGCACGATACCGGAGCACGCGGCTGCCGAGGACGACGCCAAGCTGAGGAGTTACATAGCGCACGAGCGAGACGCCGAGCTCCGCGGTTACGTGTGCGAGCGGGACAGGCGGCGCGACGCTCGCCACGGGTGCGAGCGGGACAGCACGAGCCCGCTGTACGCGTCGCCGCCGCGGAGTCCCACCAGCGACATCTGCAGCCCTACACAACCTACTGTAGCTTTTGGATCCCAGCCGCCGAGCCTGTCGACCGTCCAGCCCGGGCTCGCGGACCCTCACTTCAACAGAGACACGCACATGAGGATCATACTGGGCAGGGACAGCAAACCGGCTCACGATAAAAACGACAGTGCATTGTGGACGACGAAAGGAAGGCTAGCCTGCAACAAGTTATTCGGGAGTATCGAGAGAACGAGAGGCAGGATATTAAAGAAAACCAAGAACAAAAGAAATGGAATCGTCACGAATCCAGCGATGAGATTGGTGGCGAACGTCAGGAATGGACTCGATAACGCGGCGGCCAACATCCGGAGGACCGGCGTCGCCCTGGCGGCCAGCACTAGCTCCAACAATCCGGCAGTCAAGTCCAACGCGTTCCAGTGGAGGAAGGAGACGCCGTTGTAA

Protein

MNAANELIFLVLDGVADGFIALREIREIPSTLNGLYLWLAQRLFHGRRFAKVRLLLDVLLAARCGVTEEMLYKCLLTKEYSVTREDFNRRIHLLRRILVIEKSTGYLSIFHHSFSCWLLDVKHCTRRYLCCLADGHAALAMYYTLIAKRLSALEIHNYVYHMTRLEHHLSSLNKSRGDQDGPVDLHTLVLLWVLDSSCDVESALKNEVRRLDMSQKTEASHVEESSGREENAQTTDSASIESIMPELISGAPVAWCKDKRVARALYELAKGPALLDPSDVGAGEVIIEQSNEDEVPQESCEEREDPIVLDPNIIHELVARASPGAGGRGGGGEAGLQAAAARGRAGCALALLRAGAAPDVPDADGWSPLRAAAWAGHTEVVDVLLEYGCDVDCVDADNRTALRAAAWSGHEAVVSRLLAAGAAPDRADAEGRTALIAAAYMGHAEIVRALLDAGARVDHADEDGRTALAVASLCAGGAACAALLLERGADVTAHDRDHATPLLVAAFEGHTEICELLLEAEADIEACDGAGRTALWAAASAGHADTVRLLLFWGACVDGMDAEGRTVLCTAAAQGNVEVVRQLLDRGLDEHHRDNSGWTPLHYAAFEGHIEVCEALLEAGAKVDEADNDGKGALMLAAQEGHTRLVEILVDDWGAPVDQRAHDGKTALRLAALEGQFSTVSALHARGADADAVDADRRSTLYVLALDNRLAMARFLLTSCGASVHTADAEVRTPLHVSAWQGHTDMVNLLITVGGARADGRDAARRTALHAAAWRGRRAALHALLRHGADPSALCSQGATPLGIAAQEGHEECVLYLLQYGADPQQTDHCGRTPAKVAWRAGHANICRLLERWPTVSEQLPPTAPPLAARTPSAGSPEFKRRSVHSSNSTKSSSNLTGGSHPSHEPEPPAEPHDKGRASLSFAQQVARCGRPRRGRERDSTIPEHAAAEDDAKLRSYIAHERDAELRGYVCERDRRRDARHGCERDSTSPLYASPPRSPTSDICSPTQPTVAFGSQPPSLSTVQPGLADPHFNRDTHMRIILGRDSKPAHDKNDSALWTTKGRLACNKLFGSIERTRGRILKKTKNKRNGIVTNPAMRLVANVRNGLDNAAANIRRTGVALAASTSSNNPAVKSNAFQWRKETPL

Uniprot

A0A194PUB7 A0A2W1BPR0

Pubmed

26354079 28756777

EMBL

KQ459593 KPI96349.1 KZ149991 PZC75594.1

Proteomes

UP000053268

Pfam

PF12796 Ank_2 + More
PF00023 Ank

Interpro

IPR020683   Ankyrin_rpt-contain_dom        + More
IPR036770   Ankyrin_rpt-contain_sf
IPR002110   Ankyrin_rpt

SUPFAM

SSF48403 SSF48403

Gene 3D

1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

A0A194PUB7 A0A2W1BPR0

PDB

6MOL E-value=2.61576e-46, Score=472

KEGG

101746475 K21440 ankyrin repeat domain-containing protein 50 | (RefSeq) ankyrin repeat domain-containing prote

GO

GO:0005515 GO:0006355 GO:0043565 GO:0009982 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

1145

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.232090000000001

Exp number, first 60 AAs:

0.10143

Total prob of N-in:

0.01052

outside

1 - 1145

Pi

23.079854

Theta

18.862204

Tajima's D

-1.445396

CLR

108.220596

CSRT

0.0652467376631168

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics