SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14176
Pre Gene Modal
BGIBMGA011419
Annotation
PREDICTED:_Krueppel-like_factor_3_[Papilio_xuthus]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.002
 

Sequence

CDS
ATGAAGAAAACCCTCCTTCCTCCTCCTAAAGAGAGCTTTATGGTTTACATGGGTGACAGAGGGGGCGTGGGGCGTCAAGCCACCGTGCCGCCTGCGACTGAGGCAAGCTGTCCCCCAGTTCAAGTGGAGCCAGTGGACCTGTCCCTCAAGAGACAGCCCCCGACGCCGAGGAGACGACATCGAAACTTCGCATCAACAAATCTGTCGCCGAGATTGAACAACAATGACGGATCTGCCGAACATCAAAACTTTATCGAGTCAAGCCATCATATACCTAAACATAGAATGGGGGCGGACCTCAGAAGCACAAGAAGACCAAAACAGAATTACAACAGATTAAAACAACAAGATCATCAATCATCGCATCAGCCGCTTCCATCAAACGATATTTCCAAACTAGCAATGGATTTCCGAAAGCAATTCCTACCGCCGATCGTGCCATTCGCGCTTCCGAACCGCGAATCCAACGTGGAACTAAAAAACTTCCTGATAAACACGGCACTGCAAAACGTCATAGCCGGCTCTGTAAACGCGTTCCCGGACGCGTTCACGAAAACCGCTACGGAGGACGCTAAAGACGTATTCAATAATAACGAAGACGTGTCGAGTCGTAGGAGGCTTCATAAATGCGACGTTGTCGGCTGTCATAAAGTTTACACGAAGAGCTCGCACCTGAAGGCGCACAAGCGCACGCATACAGGCGAGAAACCGTATTCCTGCGCTTGGGCGGGTTGCGAATGGCGCTTCGCCCGCTCCGACGAACTAACCCGGCACACTCGTAAGCACACGGGGCTCCGCCCCTTCACCTGCCCCGTCTGCGCTCGCTCGTTCGCGCGCTCCGACCACCTCGGCCTGCACATGAGGCGGCATTGA
Protein
MKKTLLPPPKESFMVYMGDRGGVGRQATVPPATEASCPPVQVEPVDLSLKRQPPTPRRRHRNFASTNLSPRLNNNDGSAEHQNFIESSHHIPKHRMGADLRSTRRPKQNYNRLKQQDHQSSHQPLPSNDISKLAMDFRKQFLPPIVPFALPNRESNVELKNFLINTALQNVIAGSVNAFPDAFTKTATEDAKDVFNNNEDVSSRRRLHKCDVVGCHKVYTKSSHLKAHKRTHTGEKPYSCAWAGCEWRFARSDELTRHTRKHTGLRPFTCPVCARSFARSDHLGLHMRRH

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF57667   SSF57667       
PDB
2EBT     E-value=2.29298e-34,     Score=363

Ontologies

Topology

Length:
290
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00312
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02095
outside
1  -  290
 
 

Population Genetic Test Statistics

Pi
2.989019
Theta
19.953297
Tajima's D
0.155339
CLR
0.786762
CSRT
0.416279186040698
Interpretation
Uncertain
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