Silkworm Genome Informatics Database

Gene

KWMTBOMO14174 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011170

Annotation

PREDICTED:_anoctamin-4-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr23(-):19762061-19772739 View in EpiBrowser

Full name

Anoctamin

Location in the cell

Nuclear Reliability : 4.149

CDS

ATGGAAAACACGAAATCACCAAGCGAAGCGCCAATAAAGAAAACCGGGTCACGACTGAACGAGCGCGCACCCCGCATCACGCTGCAGCATTTAGACAAGCTCGGCCATGGTCTGGAGAAAGTCGGCCATCTCGTTGGCCAAACGTTGGACCAGCGTTCCGTGCTGGATCGGATTACCTTTGAAACGGAGAGGCTGAGTCACAGCGAAGCGTCGTCGAGACGTAACAGCGACGATGGAGGCAGATCCAACAAGGAAAGTCTTAGGGCAGACGGCACTAACTCGGAGCCTCCCACGGCCAACGTGACCAATCAGAACGCGTGGAATGACCTCGCCAGCTCCACGTCTACGACCAGAACTGAATTGAGTCTATCAGACAGCGCAATGGACGAGGCTTCAGATCCTCGCCGTAGGAGCCACGAGTCGGCCCTACCAGGTACTCCGATGCACGCCAGAACAATGTGGAAATCAACTGACTCGCTCGCCCCGGAGTCGGCGTTTGGAACCTCTCTGGCAGACATCATGGAAAGCCCTGCTAACAAGATCCACCTCCGAGAAGACATCAGATCCATCCATTCGGACAGCTCCGACGAAAGGAAGCCGCGCGGATGGCGCTACGTCAGAAACCTCACTTCGGCAGCGGGGGGGCTCGTTAATAAGACCAAGGACGCTGCTGCTTTGCCCGGTACACCCTTGCCCAGTTTCCAGTCCAAGCCGGAGGACCAGGCCCCGGAGAGCCCGAACAAACCTGACAGGAAGCACTCGCTCCCGAGAAATCCGAAGGAAAAAGACGAAAGCCTTGGCGAAACAAACCCTGAAGGATTAGAACCAGAGTCTTTGATGTTTCGCGACGGCAGACGACGAATAGACATGGTTTTGGCTTACGAGGAGGAAGACTACGGGGTTATGACGGAAGCTGAGGCGAAGAAACGAGATTATAGAAGAACATTCCATGAAAATTTGATTAAGGAAGGCTTAGAACTGGAGTTGGAGAACAAATGCCTGTCTTTTGACGAGAAGACCTGGTTCTTGAAGATCCACATACCGTGGAAGACCGAGATGAGACTGGCCGAGGTTATTGGCATGAAGCTACCGACTAAGAGGTTCATATCAATATCTGTCCGAGCTTGGAGCGACGAGAAGCAAGTAGAGAGAGACAAAAGATGGTATTCAAAATGGCGTCGGATATGGAAGCAGATTTACGAGTACGAGCACAGTAGGATCGAGCCTGAACCTTCCTTCTACGCGGCCACAGAAAACAAATGCGTTAGGAGAGAAGAACAGTATGTATGA

Protein

MENTKSPSEAPIKKTGSRLNERAPRITLQHLDKLGHGLEKVGHLVGQTLDQRSVLDRITFETERLSHSEASSRRNSDDGGRSNKESLRADGTNSEPPTANVTNQNAWNDLASSTSTTRTELSLSDSAMDEASDPRRRSHESALPGTPMHARTMWKSTDSLAPESAFGTSLADIMESPANKIHLREDIRSIHSDSSDERKPRGWRYVRNLTSAAGGLVNKTKDAAALPGTPLPSFQSKPEDQAPESPNKPDRKHSLPRNPKEKDESLGETNPEGLEPESLMFRDGRRRIDMVLAYEEEDYGVMTEAEAKKRDYRRTFHENLIKEGLELELENKCLSFDEKTWFLKIHIPWKTEMRLAEVIGMKLPTKRFISISVRAWSDEKQVERDKRWYSKWRRIWKQIYEYEHSRIEPEPSFYAATENKCVRREEQYV

Similarity

Belongs to the anoctamin family.

Uniprot

H9JNR6 A0A2H1W0U8 A0A2A4K343 A0A2W1BSG4 A0A194PZ22 A0A0N0PDV9 + More
A0A3S2LAU8 A0A212FPR5 A0A1J1IWQ2 A0A0M8ZRA6

Pubmed

19121390 28756777 26354079 22118469

EMBL

BABH01010041 BABH01010042 ODYU01005361 SOQ46124.1 NWSH01000181 PCG78681.1 + More
KZ149991 PZC75586.1 KQ459593 KPI96405.1 KQ460036 KPJ18428.1 RSAL01000062 RVE49577.1 AGBW02001601 OWR55699.1 CVRI01000059 CRL03590.1 KQ435888 KOX69520.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000283053 UP000007151 + More
UP000183832 UP000053105

PRIDE

H9JNR6

Pfam

PF16178   Anoct_dimer        + More
PF04547   Anoctamin
PF00501   AMP-binding

Interpro

IPR007632   Anoctamin        + More
IPR032394   Anoct_dimer
IPR000873   AMP-dep_Synth/Lig
IPR042099   AMP-dep_Synthh-like_sf

Gene 3D

3.40.50.12780

ProteinModelPortal

H9JNR6 A0A2H1W0U8 A0A2A4K343 A0A2W1BSG4 A0A194PZ22 A0A0N0PDV9 + More
A0A3S2LAU8 A0A212FPR5 A0A1J1IWQ2 A0A0M8ZRA6

PDB

6QPI E-value=4.0311e-12, Score=173

KEGG

101743796 K19499 anoctamin-4 | (RefSeq) anoctamin-4-like

GO

GO:0046983 GO:0016021 GO:0007596 GO:1902476 GO:0030501 GO:0034767 GO:0061588 GO:0002407 GO:0016020 GO:0003824 GO:0005622 GO:0005840 GO:0006412 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR12308

Subcellular location

Membrane

Length:

429

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00782

outside

1 - 429

Pi

19.770774

Theta

17.748281

Tajima's D

0.296994

CLR

1.374618

CSRT

0.457977101144943

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics