SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14172  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011170
Annotation
PREDICTED:_anoctamin-4-like_isoform_X2_[Bombyx_mori]
Full name
Anoctamin      
Location in the cell
PlasmaMembrane   Reliability : 4.059
 

Sequence

CDS
ATGTATTATTTAGCCACAACATTTCTGGAGCTCTGGAAGAGGAAGCAGTCCGTGCTGAGATGGGAGTGGGACTTGGGTGGCGTCGACTATGACGAGGACCCTCGGCCAGAGTTCGAAACCTCAGCGAAGACATTCCGCACCAACCCTGTGACCAGGGAGAAGGAGCCTTATCTACCAGTCTGGCAGAAGACCATGAGATACATCGCGACGAGCAGCGCAGTTTTGTTCATGATCGCGATCGTGATGGGAGCGGTCCTCGGGACCATCATCTACAGGATCTCCATGGTGTCAGTCATCTACGGTGGCTCGGGGTTCTTCATACAGCGGCACGCAAAGATCTTCACCGCCATGACAGCAGCCCTGATCAATTTAATCATCATCATGATTCTGACCAGGATATACGCCAAGGTGGCGGTCTATCTGACGAACATGGAGAACCCTCGCACCCAAACGGAATACGAAGACTCGTACACCTTCAAAATATTTTTCTTTGAGTTCATGAACTTTTATTCTTCTTTGATTTACATTGCGTTCTTTAAGGGTCGTTTCTACGACTACCCCGGCGACGACCAGGCCAGGAAGTCGGAGTTCTTCAAGCTAAAAGGCGACATCTGCGATCCGGCCGGCTGTCTCTCCGAGCTGTGCATACAACTAGCCATCATTATGATTGGGAAGCAATTCTTCAACAACTTCTTGGAACTGGGATTCCCCAAGTTCCACAATTGGTGGCGTCGTCGCTCGCACCGGGCCGTGACCAGGGACCCCAGCAAGCCGCACATGGCGTGGGAACAGGACTACCACCTCCAGGACCCTGGGAGGCTGGCCTTGTTCGATGAATACCTAGAAATGATCCTCCAATACGGTTTCGTGACGTTATTTGTGGCCGCCTTCCCGCTGGCCCCACTGTTCGCATTGCTCAACAACATAGCCGAGATCAGACTGGACGCGTACAAAATGGTGACACAGGCGAGGCGACCTCTAGCGGAGAGGGTCGAGGACATCGGAGCCTGGTACGGGATATTGCGTGGGATAACGTATGCGGCGGTCGTCTCAAATGCGTTCGTGATAGCGTACACAAGTGATTTCATTCCGCGTATGGTCTACAAATACGTCTATTCCCCGGACAACACCCTAGCAGGATACATAGACCATTCGTTGTCTCTGTTCAACACATCAGATTACCGGGAAGACTGGGGGGCTGACGAGAACGAAGTTGACCCCCCGGTGTGTGCGTACCGCGGGTACCGGAATCCGCCAGACCACGCAGACCCCTACGGTCTGTCTCCGCACTACTGGCACGTGTTCGCGGCAAGACTGGCCTTCGTCGTCGTATTCGAGCATGTTGTATTCGGTCTAACGGGCCTAATGCAGCTGTTTATACCCGATTTGCCGAGCGAACTGCGGATACAGATGCAAAGGGAAGCGCTGCTAGCTAAGGAAGCGAAATATGAGCACGGCAGAAGAAGATTGTCTACCGAATACAGACAGCTGATCACGCAGAAAAGCGAGAGCAGCGGAGAGCGCCCCGCTGGTCCGTGGCTGCGTCGGACCTCCCGGGCCTCGGACGGGCTGGACGCGCACGTTGCCGTCGCCCAGAAACCTTCTTCTCCACAAATAACGCACTGA
Protein
MYYLATTFLELWKRKQSVLRWEWDLGGVDYDEDPRPEFETSAKTFRTNPVTREKEPYLPVWQKTMRYIATSSAVLFMIAIVMGAVLGTIIYRISMVSVIYGGSGFFIQRHAKIFTAMTAALINLIIIMILTRIYAKVAVYLTNMENPRTQTEYEDSYTFKIFFFEFMNFYSSLIYIAFFKGRFYDYPGDDQARKSEFFKLKGDICDPAGCLSELCIQLAIIMIGKQFFNNFLELGFPKFHNWWRRRSHRAVTRDPSKPHMAWEQDYHLQDPGRLALFDEYLEMILQYGFVTLFVAAFPLAPLFALLNNIAEIRLDAYKMVTQARRPLAERVEDIGAWYGILRGITYAAVVSNAFVIAYTSDFIPRMVYKYVYSPDNTLAGYIDHSLSLFNTSDYREDWGADENEVDPPVCAYRGYRNPPDHADPYGLSPHYWHVFAARLAFVVVFEHVVFGLTGLMQLFIPDLPSELRIQMQREALLAKEAKYEHGRRRLSTEYRQLITQKSESSGERPAGPWLRRTSRASDGLDAHVAVAQKPSSPQITH

Summary

Similarity
Belongs to the anoctamin family.
Feature
chain  Anoctamin
EMBL
BABH01010041    BABH01010042    NWSH01000181    PCG78681.1    RSAL01000062    RVE49577.1    + More
KZ149991    PZC75586.1    KQ459593    KPI96405.1    AGBW02001601    OWR55699.1    KQ460036    KPJ18428.1    AXCN02002125    ATLV01016983    ATLV01016984    ATLV01016985    ATLV01016986    KE525139    KFB41696.1    CH477461    EAT40566.1    CH916366    EDV97903.1    CH940647    EDW70666.2    CH933809    EDW19052.2    AAAB01008849    EAA07133.4    ADMH02001609    ETN61810.1    GAMC01001559    JAC04997.1    AE014296    AAF49976.2    AGB94426.1    CH954178    EDV51503.2    CM000159    EDW94239.2    CH963847    EDW72898.2    CM002912    KMY99128.1    CM000363    EDX10168.1    CH902618    EDV39435.2    OUUW01000009    SPP84691.1    CH379069    EAL30791.3    ODYU01009471    SOQ53936.1    CH479188    EDW40165.1    JXJN01007264    UFQT01000292    SSX22911.1    CCAG010002961    KQ971344    EFA05242.1    APGK01044219    KB741021    ENN75070.1    CVRI01000059    CRL03590.1    AJWK01030095    AJWK01030096    KQ414620    KOC67687.1    KQ759773    OAD62918.1    NNAY01000744    OXU26716.1    APCN01005189    KZ288220    PBC32181.1    DS235063    EEB11171.1    KQ434889    KZC10272.1    GBYB01005541    JAG75308.1    KK107399    EZA51346.1    GL447283    EFN86600.1    GBRD01015619    JAG50207.1    GBRD01015621    GBRD01012041    JAG50205.1    GBRD01015620    GBRD01012043    JAG50206.1    GBRD01012042    JAG53782.1    GL766836    EFZ14563.1    GL444096    EFN61274.1    KQ980989    KYN10592.1    KQ982353    KYQ57213.1    KQ981264    KYN44019.1    ADTU01001341    JRES01001255    KNC24162.1    KQ977726    KYN00321.1    QOIP01000002    RLU25404.1    GL888217    EGI64690.1    ACPB03016662    KK852602    KDR20488.1    ODYU01000790    SOQ36107.1    LNIX01000006    OXA52495.1    AMQN01007128    KB300038    ELU07311.1    JH431912    KL447189    KFO70676.1    AABR07056545    AABR07056546    AABR07056547    AABR07056548    AABR07056549    AABR07056550    AABR07056551    CH473960    EDM16991.1    HAEF01004701    SBR42083.1    KL413618    KFW75914.1    KK495622    KFQ65404.1    KK590763    KFV99928.1    KN126564    KFU90665.1    HAEH01016998    SBS05430.1    HADZ01001481    SBP65422.1    AGTO01000061    AGTO01020300    KK708706    KFQ32025.1    HAED01005440    SBQ91470.1   
Pfam
PF16178   Anoct_dimer        + More
PF04547   Anoctamin
PF00501   AMP-binding
Interpro
IPR007632   Anoctamin        + More
IPR032394   Anoct_dimer       
IPR000873   AMP-dep_Synth/Lig       
IPR042099   AMP-dep_Synthh-like_sf       
IPR031293   Anoctamin-4       
Gene 3D
PDB
6QPI     E-value=1.09839e-90,     Score=851

Ontologies

Topology

Subcellular location
Membrane  
Length:
541
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
131.05479
Exp number, first 60 AAs:
2e-05
Total prob of N-in:
0.97957
inside
1  -  70
TMhelix
71  -  93
outside
94  -  112
TMhelix
113  -  135
inside
136  -  155
TMhelix
156  -  178
outside
179  -  283
TMhelix
284  -  306
inside
307  -  333
TMhelix
334  -  356
outside
357  -  541
 
 

Population Genetic Test Statistics

Pi
17.770775
Theta
15.569415
Tajima's D
0.230448
CLR
0.773776
CSRT
0.43912804359782
Interpretation
Uncertain
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