Gene

KWMTBOMO14171

Pre Gene Modal

BGIBMGA011172

Annotation

PREDICTED:_scavenger_receptor_class_B_member_1-like_[Amyelois_transitella]

Location

Bomo_Chr23(-):19705671-19735039      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.538 PlasmaMembrane   Reliability : 1.025

CDS

ATGGAAAATCTCAACGGCGACAAGAACACTGCAGTGCCGATGATAACGAAAGACGTTGAGAAGGTCTCAACTCCCGCCCCTGGTGTTGGGAAGGTCTTGATCAGAGAGGACACGGTGCTGACCGTGCCAGGCTGTACTAGCTGCGGGAGAGGCCAGTTCACGTGTTCCGGAGTCCAGAAACAATGGTCGGCGCTCTGCTGGGGACAGCAGTCGGATAAAAAATATTACACGCTGCTAGTCGTTCTGTCGACAACCTTCGTTCTGAGTTTGATCGGGACGATATTCTCGTGCTTCACAAATACAATCAACGATGCTATCTTATCTAACATGATAATCCGGAACAACTCAATGGCTTTTTCGTTGTGGGAGCATCCCACCGTGGAGCCACTGATGAAGGTATACCTCTTCAACTACACTAACTGGGAGCAAGTGAGGGATGGCGATGAAAAGAAGCTACACGTCGAAGAAGTCGGACCATATGTTTATTCCCAAGAGTTAGATAGGGTTAACGTTGAATTCGATGGCGACCAGCTGAGCTTCCAGGAGCTAAACAATTTCCGTTACATTCCTGAGAAGACGAACGGCGCGTATTACGACCAGGTCTTCGTACCGAACCTCCCGCTACTGGGCGTGGTCTCAATGTCGGTGGGCATGAATCTAAGCCCATTCGCCCAAATGTCATTGAATTCCGCCTTCGACTGGGCGAATCACCCCGATCCATTCGCCAAGCTACCCGTGCACAGGTTTCTGTGGGGATATGACGACAGCATCATAAACATAGCGATTCCATTCCTCTCCTTCATCAACCAGTGGAAATTCAAGGAGTTCGGACTACTGGCCGGTAAAAACAGAACACTGTCTGACCGCTACACAATCAACACTGGCGAAAAGAATATAGATCGGATGAATATCATCGAAAAGTTTGATGGAAGAGACCATTTGACTTATTGGGGTAGCCCCGAGTGTAACAGCTTAGAAGCGACAGACGGCTCTATCTTCCCTCCATCACAACTGGACAAGAATAAGACTCTATATGTATTTTATCCTCAACTTTGCCGACGATTGCCGTTCAGATTTGAAAAGGAAGTTGAGGTAAATTTCTTTTAG

Protein

MENLNGDKNTAVPMITKDVEKVSTPAPGVGKVLIREDTVLTVPGCTSCGRGQFTCSGVQKQWSALCWGQQSDKKYYTLLVVLSTTFVLSLIGTIFSCFTNTINDAILSNMIIRNNSMAFSLWEHPTVEPLMKVYLFNYTNWEQVRDGDEKKLHVEEVGPYVYSQELDRVNVEFDGDQLSFQELNNFRYIPEKTNGAYYDQVFVPNLPLLGVVSMSVGMNLSPFAQMSLNSAFDWANHPDPFAKLPVHRFLWGYDDSIINIAIPFLSFINQWKFKEFGLLAGKNRTLSDRYTINTGEKNIDRMNIIEKFDGRDHLTYWGSPECNSLEATDGSIFPPSQLDKNKTLYVFYPQLCRRLPFRFEKEVEVNFF

Similarity

Belongs to the CD36 family.

Uniprot

A0A144IJT2   A0A0N0PDZ0   A0A194PSW7   A0A1S4EVA3   Q17PS1   A0A1W7R6P7   + More
A0A1Q3G4P8   A0A1W4X6N5   J3JYI6   D2A3T6   A0A067R9W5   U4UXH0   N6SXG0   A0A182RQG2   A0A1B6K074   A0A1B6CLY9   A0A0T6BF94   U5ERK4   A0A2J7PW72   A0A1Y1KHJ4   A0A1W4V0J0   A0A224XN62   A0A1B6L2A4   A0A2J7PW68   B3MCD0   A0A1B6ES61   A0A0P8XQ07   A0A182SAL9   A0A1Y1KK00   A0A1B0CTE8   A0A0M4EWV8   A0A1Y1KHJ6   A0A3B0J111   Q24336   B4IHC1   A0A0B4LGP3   A0A0J9RKW7   A0A3B0JMG0   A0A1L8DLE5   A0A0J9RL49   Q7KVF1   A0A1L8DJT9   A0A182QU05   A0A0Q9WFT2   B4LL12   B4QD55   Q9W0X0   A0A0R3NRJ3   B4GDA2   Q292L3   Q8IGY0   A0A1L8DJU3   E0W153   A0A224XLY5   A0A0Q5VNZ8   A0A0Q5VYK1   B3NR92   A0A336MNJ0   B4PBY8   B4KQT1   A0A0Q9XHK8   A0A0A9Z111   A0A146L3X1   A0A224XTQ2   A0A182JPL3   A0A0A9YZJ9   A0A182V692   D2K2F5   A0A182UJN9   A0A023ETI9   A0A182WS43   A0A182LHW6   A7UTD2   A0A182HXT9   A0A1Y1M5E8   A0A182FCS5   A0A0L7RDG6   T1HG69   Q17PS2   A0A0P4VMG3   A0A182J7A1   A0A2M4BMG3   A0A2M4BM18   B4MNU8   A0A0A1WD10   A0A1I8PMR0   A0A182P0L0   A0A0P4VLZ6   U5ET11   A0A026WY03   A0A084VUD9  

Pubmed

26354079    17510324    22516182    18362917    19820115    24845553    + More
23537049    28004739    17994087    18057021    7693949    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    26109357    26109356    15632085    23185243    20566863    17550304    25401762    26823975    20230829    24945155    20966253    12364791    14747013    17210077    27129103    25830018    24508170    24438588   

EMBL

KU866108    AMT75336.1    KQ460036    KPJ18425.1    KQ459593    KPI96407.1    + More
CH477189    EAT48770.1    GEHC01000813    JAV46832.1    GFDL01000265    JAV34780.1    BT128314    AEE63272.1    KQ971348    EFA05669.1    KK852602    KDR20477.1    KB632404    ERL95041.1    APGK01052768    KB741216    ENN72459.1    GECU01002847    JAT04860.1    GEDC01022903    JAS14395.1    LJIG01000940    KRT86000.1    GANO01002765    JAB57106.1    NEVH01020937    PNF20579.1    GEZM01083922    JAV60942.1    GFTR01006997    JAW09429.1    GEBQ01022202    GEBQ01012636    GEBQ01007898    JAT17775.1    JAT27341.1    JAT32079.1    PNF20578.1    CH902619    EDV37254.1    KPU76657.1    GECZ01028983    JAS40786.1    KPU76658.1    GEZM01083924    JAV60938.1    AJWK01027490    AJWK01027491    AJWK01027492    CP012524    ALC42370.1    GEZM01083923    JAV60939.1    OUUW01000001    SPP74475.1    X73332    CAA51759.1    CH480838    EDW49297.1    AE013599    AHN56668.1    CM002911    KMY96501.1    SPP74476.1    GFDF01006853    JAV07231.1    KMY96502.1    KMY96503.1    AAF47309.1    AAM70804.1    AHN56667.1    GFDF01007362    JAV06722.1    AXCN02001921    CH940648    KRF80260.1    EDW61819.1    KRF80261.1    CM000362    EDX08651.1    KMY96500.1    AAM70803.2    CM000071    KRT01621.1    CH479181    EDW31578.1    EAL24849.1    KRT01622.1    BT001535    AAN71290.1    GFDF01007393    JAV06691.1    DS235866    EEB19359.1    GFTR01006976    JAW09450.1    CH954179    KQS63165.1    KQS63163.1    KQS63164.1    EDV57111.1    UFQT01001469    SSX30709.1    CM000158    EDW92642.2    CH933808    EDW09280.1    KRG04561.1    KRG04562.1    GBHO01006566    GBHO01006565    GBRD01009533    JAG37038.1    JAG37039.1    JAG56291.1    GDHC01015425    JAQ03204.1    GFTR01004943    JAW11483.1    GBHO01006563    JAG37041.1    GU175173    ACZ58351.1    GAPW01000970    GEHC01000812    JAC12628.1    JAV46833.1    AAAB01008905    EDO64040.1    APCN01005348    GEZM01041504    JAV80298.1    KQ414614    KOC68806.1    ACPB03002065    EAT48769.1    GDKW01002615    JAI53980.1    GGFJ01004990    MBW54131.1    GGFJ01004989    MBW54130.1    CH963848    EDW73787.2    GBXI01017525    JAC96766.1    GDKW01002844    JAI53751.1    GANO01002985    JAB56886.1    KK107064    EZA60922.1    ATLV01016726    KE525103    KFB41583.1   

Proteomes

UP000053240    UP000053268    UP000008820    UP000192223    UP000007266    UP000027135    + More
UP000030742    UP000019118    UP000075900    UP000235965    UP000192221    UP000007801    UP000075901    UP000092461    UP000092553    UP000268350    UP000001292    UP000000803    UP000075886    UP000008792    UP000000304    UP000001819    UP000008744    UP000009046    UP000008711    UP000002282    UP000009192    UP000075881    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000069272    UP000053825    UP000015103    UP000075880    UP000007798    UP000095300    UP000075885    UP000053097    UP000030765   

PRIDE

Q24336    Q7KVF1    Q9W0X0    Q8IGY0   

Pfam

PF01130   CD36

Interpro

IPR002159   CD36_fam        + More
IPR005429   LimpII       
IPR005428   CD36/SCARB1/SNMP1       

ProteinModelPortal

A0A144IJT2   A0A0N0PDZ0   A0A194PSW7   A0A1S4EVA3   Q17PS1   A0A1W7R6P7   + More
A0A1Q3G4P8   A0A1W4X6N5   J3JYI6   D2A3T6   A0A067R9W5   U4UXH0   N6SXG0   A0A182RQG2   A0A1B6K074   A0A1B6CLY9   A0A0T6BF94   U5ERK4   A0A2J7PW72   A0A1Y1KHJ4   A0A1W4V0J0   A0A224XN62   A0A1B6L2A4   A0A2J7PW68   B3MCD0   A0A1B6ES61   A0A0P8XQ07   A0A182SAL9   A0A1Y1KK00   A0A1B0CTE8   A0A0M4EWV8   A0A1Y1KHJ6   A0A3B0J111   Q24336   B4IHC1   A0A0B4LGP3   A0A0J9RKW7   A0A3B0JMG0   A0A1L8DLE5   A0A0J9RL49   Q7KVF1   A0A1L8DJT9   A0A182QU05   A0A0Q9WFT2   B4LL12   B4QD55   Q9W0X0   A0A0R3NRJ3   B4GDA2   Q292L3   Q8IGY0   A0A1L8DJU3   E0W153   A0A224XLY5   A0A0Q5VNZ8   A0A0Q5VYK1   B3NR92   A0A336MNJ0   B4PBY8   B4KQT1   A0A0Q9XHK8   A0A0A9Z111   A0A146L3X1   A0A224XTQ2   A0A182JPL3   A0A0A9YZJ9   A0A182V692   D2K2F5   A0A182UJN9   A0A023ETI9   A0A182WS43   A0A182LHW6   A7UTD2   A0A182HXT9   A0A1Y1M5E8   A0A182FCS5   A0A0L7RDG6   T1HG69   Q17PS2   A0A0P4VMG3   A0A182J7A1   A0A2M4BMG3   A0A2M4BM18   B4MNU8   A0A0A1WD10   A0A1I8PMR0   A0A182P0L0   A0A0P4VLZ6   U5ET11   A0A026WY03   A0A084VUD9  

PDB

6I2K     E-value=4.21478e-25,     Score=284

KEGG

101744283    no KO assigned | (RefSeq) lysosome membrane protein 2-like

GO

GO:0016021   GO:0005764   GO:0005044   GO:0005887   GO:0016020   GO:0005622   GO:0005840   GO:0006412   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR11923  

Length:

368

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

32.35036

Exp number, first 60 AAs:

0.00125

Total prob of N-in:

0.66380

inside

1  -  75

TMhelix

76  -  98

outside

99  -  368

 

 

Pi

2.30963

Theta

19.173098

Tajima's D

-1.162981

CLR

186.065484

CSRT

0.107444627768612

Interpretation

Uncertain