Gene

KWMTBOMO14170

Pre Gene Modal

BGIBMGA011172

Annotation

Lysosome_membrane_protein_2_[Papilio_xuthus]

Location

Bomo_Chr23(-):19701370-19704699      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.504

CDS

ATGGGAGCTCCAGCGTTGGTGTCATTTCCTCACTTCAACCTAGGAGACCCTTTCCTGTTAGACCGGATCAGTGGTCTCCATCCAGATCCATTGAAACATATCAGCTATCTGGACATACACCCAACACTTGGCATTGCACTGAAAGGGAAAAGCAGTCTTCAGCTGAACATCCAAGTGAGGAAGACGAACTATTTCTCCAATTTACACTTCCTGGATCAAGGACTTATACTGCCCATCGCTTGGATCGAAATGGGCGTCGATGAACTCCCCGAAAGTCTGCAAGCGTTGGTCTACCACGGAACTTTCTCGACCGCGGCGGCCCAGCTCGGTCTATCCGTCATCTGTATACTGACATTAATAATATCTAGCCTATGTCTGTGCCTGACGATCGTGGGTAGAAGAAAGAAGCCTTGCGTCACCCTCAAAAAAACGCCCGCAGAAATAACAAAGAACCAAGATAGCTCTTGA

Protein

MGAPALVSFPHFNLGDPFLLDRISGLHPDPLKHISYLDIHPTLGIALKGKSSLQLNIQVRKTNYFSNLHFLDQGLILPIAWIEMGVDELPESLQALVYHGTFSTAAAQLGLSVICILTLIISSLCLCLTIVGRRKKPCVTLKKTPAEITKNQDSS

Similarity

Belongs to the CD36 family.

Uniprot

H9JNR8   A0A144IJT2   A0A2A4JPS6   A0A194PSW7   A0A2H1WAD3   A0A0N0PDZ0   + More
A0A212ERZ1   A0A212EVN1   A0A0L7KSG7   A0A2J7PW72   A0A2J7PW68   A0A1B0CTE8   A0A1L8DLE5   A0A1L8DJT9   A0A1L8DJU3   A0A1Q3G4P8   A0A1S4EVA3   A0A0K8S3G0   Q17PS1   A0A0A9XTY0   A0A158NS54   A0A195BCA2   A0A182WMJ7   U5ERK4   A0A023F0P3   A0A182YBW4   A0A182QU05   A0A182RQG2   A0A182JPL3   A0A1W7R6P7   A0A0J7L8N2   A0A224XLY5   D2A3T6   A0A182MGT3   Q7Q949   A0A182P0L0   A0A182WS43   A0A182LHW6   A7UTD2   A0A182HXT9   A0A182UJN9   A0A182NV29   T1HG69   A0A1B6L2Y4   A0A0P4VMG3   N6SXG0   U4UXH0   A0A182V692   A0A195C0Z0   A0A195DE75   A0A084VUD9   F4WJR9   W5JNJ0   A0A182FCS5   A0A182J7A1   A0A195FXV5   A0A2M4BMG3   A0A2M4BM18   E2A7Q6   E9IFP3   A0A232FC44   K7J3V7  

Pubmed

19121390    26354079    22118469    26227816    17510324    25401762    + More
26823975    21347285    25474469    25244985    18362917    19820115    12364791    14747013    17210077    20966253    27129103    23537049    24438588    21719571    20920257    23761445    20798317    21282665    28648823    20075255   

EMBL

BABH01010038    BABH01010039    KU866108    AMT75336.1    NWSH01000860    PCG73819.1    + More
KQ459593    KPI96407.1    ODYU01007355    SOQ50049.1    KQ460036    KPJ18425.1    AGBW02012889    OWR44276.1    AGBW02012156    OWR45560.1    JTDY01006387    KOB66055.1    NEVH01020937    PNF20579.1    PNF20578.1    AJWK01027490    AJWK01027491    AJWK01027492    GFDF01006853    JAV07231.1    GFDF01007362    JAV06722.1    GFDF01007393    JAV06691.1    GFDL01000265    JAV34780.1    GBRD01018137    GBRD01018066    GBRD01018064    GBRD01016152    JAG47763.1    CH477189    EAT48770.1    GBHO01028031    GBHO01019507    GDHC01019295    GDHC01000521    JAG15573.1    JAG24097.1    JAP99333.1    JAQ18108.1    ADTU01024477    KQ976528    KYM81847.1    GANO01002765    JAB57106.1    GBBI01004173    JAC14539.1    AXCN02001921    GEHC01000813    JAV46832.1    LBMM01000192    KMR04531.1    GFTR01006976    JAW09450.1    KQ971348    EFA05669.1    AXCM01018401    AAAB01008905    EAA09676.2    EDO64040.1    APCN01005348    ACPB03002065    GEBQ01021875    JAT18102.1    GDKW01002615    JAI53980.1    APGK01052768    KB741216    ENN72459.1    KB632404    ERL95041.1    KQ978457    KYM93838.1    KQ980989    KYN10729.1    ATLV01016726    KE525103    KFB41583.1    GL888186    EGI65561.1    ADMH02000839    ETN64883.1    KQ981208    KYN44674.1    GGFJ01004990    MBW54131.1    GGFJ01004989    MBW54130.1    GL437382    EFN70524.1    GL762880    EFZ20609.1    NNAY01000439    OXU28391.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000235965    UP000092461    UP000008820    UP000005205    UP000078540    UP000075920    UP000076408    UP000075886    UP000075900    UP000075881    UP000036403    UP000007266    UP000075883    UP000007062    UP000075885    UP000076407    UP000075882    UP000075840    UP000075902    UP000075884    UP000015103    UP000019118    UP000030742    UP000075903    UP000078542    UP000078492    UP000030765    UP000007755    UP000000673    UP000069272    UP000075880    UP000078541    UP000000311    UP000215335    UP000002358   

PRIDE

H9JNR8   

Pfam

PF01130   CD36

Interpro

IPR002159   CD36_fam        + More
IPR005428   CD36/SCARB1/SNMP1       

ProteinModelPortal

H9JNR8   A0A144IJT2   A0A2A4JPS6   A0A194PSW7   A0A2H1WAD3   A0A0N0PDZ0   + More
A0A212ERZ1   A0A212EVN1   A0A0L7KSG7   A0A2J7PW72   A0A2J7PW68   A0A1B0CTE8   A0A1L8DLE5   A0A1L8DJT9   A0A1L8DJU3   A0A1Q3G4P8   A0A1S4EVA3   A0A0K8S3G0   Q17PS1   A0A0A9XTY0   A0A158NS54   A0A195BCA2   A0A182WMJ7   U5ERK4   A0A023F0P3   A0A182YBW4   A0A182QU05   A0A182RQG2   A0A182JPL3   A0A1W7R6P7   A0A0J7L8N2   A0A224XLY5   D2A3T6   A0A182MGT3   Q7Q949   A0A182P0L0   A0A182WS43   A0A182LHW6   A7UTD2   A0A182HXT9   A0A182UJN9   A0A182NV29   T1HG69   A0A1B6L2Y4   A0A0P4VMG3   N6SXG0   U4UXH0   A0A182V692   A0A195C0Z0   A0A195DE75   A0A084VUD9   F4WJR9   W5JNJ0   A0A182FCS5   A0A182J7A1   A0A195FXV5   A0A2M4BMG3   A0A2M4BM18   E2A7Q6   E9IFP3   A0A232FC44   K7J3V7  

PDB

4Q4B     E-value=7.71084e-11,     Score=156

KEGG

101744283    no KO assigned | (RefSeq) lysosome membrane protein 2-like

GO

GO:0016021   GO:0016020   GO:0005622   GO:0005840   GO:0006412   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR11923  

Length:

155

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

25.30178

Exp number, first 60 AAs:

0.02283

Total prob of N-in:

0.12157

outside

1  -  109

TMhelix

110  -  132

inside

133  -  155

 

 

Pi

7.651079

Theta

12.190493

Tajima's D

-1.110097

CLR

0.195154

CSRT

0.12034398280086

Interpretation

Uncertain