Silkworm Genome Informatics Database

Gene

KWMTBOMO14165

Pre Gene Modal

BGIBMGA011414

Annotation

PREDICTED:_cysteine_and_glycine-rich_protein_3-like_[Papilio_machaon]

Location

Bomo_Chr23(+):19637290-19644194 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.427 Extracellular Reliability : 1.492 Nuclear Reliability : 1.003

CDS

ATGATCAACGAGAATAACAAAATTGAAATTGACAAGCAGGCCTTCCATAGTCACTGTGCCAAGTGCTATTTTTGCCACACGGTTCCATCGTCCAACATCCACATCTGCTATGGTCAAGTCTTCTGCGAGCCTTGCTTCCAACATCACGTCTTGCACCGACATAAGGACAACCCCAATGAATTCTTCAAGCAATGCTTCGAGCAATTCGCGGACCCCAGATTTGCCGAGAATATGAAGCAATTTATGGCTGGCAAGGATGGTGCCCCGTTTGTTTTTATGCAAGGGCAACAACCGCCATTCTGTCGCTGTGGTACCGGCCCGCAAGAGTGGTTCGGTAATAGCGAACCAAAGAAATGTGCGTAA

Protein

MINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCFEQFADPRFAENMKQFMAGKDGAPFVFMQGQQPPFCRCGTGPQEWFGNSEPKKCA

Uniprot

A0A2W1BR06 A0A2A4JBR5 A0A2H1V199 A0A0N1IJ44 A0A194PSJ9 A0A212F074 + More
A0A3S2PF13 A0A1E1WLN4

Pubmed

28756777 26354079 22118469

EMBL

KZ149991 PZC75577.1 NWSH01002113 PCG69138.1 ODYU01000001 SOQ34044.1 + More
KQ460036 KPJ18421.1 KQ459593 KPI96411.1 AGBW02011174 OWR47101.1 RSAL01000062 RVE49571.1 GDQN01003169 JAT87885.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000007151 UP000283053

Pfam

PF00412 LIM

Interpro

IPR001781 Znf_LIM

ProteinModelPortal

A0A2W1BR06 A0A2A4JBR5 A0A2H1V199 A0A0N1IJ44 A0A194PSJ9 A0A212F074 + More
A0A3S2PF13 A0A1E1WLN4

KEGG

101743651 no KO assigned | (RefSeq) cysteine and glycine-rich protein 2-like

GO

GO:0046872 GO:0008270 GO:0016043 GO:0017048 GO:0030036 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

120

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00894

Exp number, first 60 AAs:

0.00894

Total prob of N-in:

0.39138

outside

1 - 120

Pi

19.92278

Theta

17.819443

Tajima's D

-1.260976

CLR

3.525021

CSRT

0.0940452977351132

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics