SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14156
Pre Gene Modal
BGIBMGA011410
Annotation
PREDICTED:_uncharacterized_protein_LOC101743235_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.151
 

Sequence

CDS
ATGAATACTAATAATCATGGTTGGACCTTATGCCCTTCCAAAAGATTTCCCGGTAAATTTTATTATTTTAACGTCTTGAATGGTGAGGCAGCTTGGAGTTTGACTGATAATGAAGGTACAGCCGTGGAAAAGAATAAAGAAATACATAAAATCACAGACAACAAGCACAATTATGCCGAACCAAGCAATCCTCCTGAAAATTCCAGACCAATGACAGGGCCAAAGTATTATCCCAAAATCGTACCAGAATTTGGTCAAGCAGTCTTCCCTAATGAAAACACTTTTGCAAGACAGGAAAATGGTAAGGCTAATAATGAATCATTTAAAAACGAAGAATGTCTGATGATAAATTCACAAAGAGTACAAGATCACAAAGATCTAATGAAGTTGGAAAAACATGATCTGAGGCTATTACTGCTTGCCAAAAAGAGAGGAACATCTGAAAGGGTACATCCTAGTATTGAAAAAAAAACCAAGACAGTATCGGATGAACCATCTAAACTGCTAACGTCGATGAGGGTTACGTTCAATTTAAACAATCAAGATTACAATGAAGAGGATAAACAGAACCAGAATGTGACATGGAATTTGAGAAATTTGTTTCTGGAAGACATCAATAGTTATTTTCTCATTGACATCGAAACGTTTTTGGAGAAATTGAATTTGATAGAATGTTACATTGCAGAAGATGAGAACCGACGTCTACTGATACCGGAGCTGATGAGGAACGAAATTGATGCCTTCTCTAGGGTCGAAGCTCGTGACATTAAAATTGTATGTGCGGCCAGGAAAATAACGCGGATGCTGGCAAGAGCGACACAGCAATTTATTATCTTGCAAAATAAATGGGGCGAACATTTGAGAATGTCGACGAACGATCTGATATTGAACTACTGTATCGAGATGGGTCACAGAGCGATACTGATAACGGACGATTCGAATCTGCGAAAACGGGCGGTAAATTTAAAAATAAAATGCTTGAGCACTCAACAGATCAGTTCAGAACGAAACGACTGTGACATTCGTTTGTACAGAAATAAAAGTCAAAATGACGTCACTCATCACTCTGAAGCAACAAGGAGCTGGCGCATTGGCGATGGCGCATATAAACTGACATGCGACAATAACACTGACGGCCAAAGGAAGTTGTCATTTAAAAACACGAAAGGAACGGAAAACTTCGAGTTCAATACCAACGAGATTGGGAATGAATGGAATGAACGGTTTTTGAATTTCGTTCCCGCAGACCACAGTCTAAGTTCCATAGACAACGAATTGAAAGGTTTCTCCGTGGTGAACGATTTGATCGAGCACAGATTAAGGAGCAGATTCGACGAATGGACCTGTAGCTTCACGCAGATCATGGAGAGCACTATTTTGAATATAATACAGCCAAACGACAGACAACCTATCAATAGTTTAATAGAAGCATTAATGAAACTCCGAAATTATTGTGAAGACGAAAATATTAATAACATCATAGAGAAACTAAAGGACCTGTTCGAAAATAATTGTCAGAGAGGTAAAATAAAGAAAGACATTAACGGGAATGAATTTATGAAAATAATCGGCTGCGGTTTTATTTTATTAAAGAATCTACAGATATACTACGCCAACGACCGGGACCTCGAGGAAGCCTGCGAGTCCATGGACCACTTGATACGTAACATCGTGGACCCGGCCGCCGACCCGCACGCGCCCGACCACAGCGCCAGCGACGCGCAGCATCCGCCCGCCGGGACGGACGCACAGCACGAGAGGCGGATCTTCAGAAAGAAATCAACGGAAGTACTAAATTACGTGATGAAGCACTACCCTCAGTGGGAGAGCTGCGAGGGAAACGACGTGACGAGGATCGCTGATGAAAAGGCACAAAAAATTCCTGACAGCCGGAAGGTATTCAGGGCTTTGGGTAAAGATTTGAATCACGTCAAAATAGACAGAAACAACAATATGTCTATGACTAAAGCCAATTTCTTACCCAAGAAGACGACCCAAAAAGCTGTTAATAATACCGGGAAAATCATTGAAAATGGCAACATCGAAACGGCCAGACCTATGCTGGAACATCAAAACGATAAGATTCAAACGCAGAACAGAATTGAGAAGAAAATCGATTTAAACACGAAGGAAGGGATCAATGGAAAGAAACTGAACAATGAAGGTTCGAAATTTGAAAATTCAAATGTCATTACCGGCGCGGTTCGGTGCGATAGTGATGTGCGACTGGCGATGAACATGAACAGTTCCGATTTGAATCGAGACGATTTGAATGACGTTGATGATGTCATGTCCGTCAACGATTTATACGACAGCGGTATTGAAAACGACAGCTACCAAGCTTATTCGCTGGCCAAGTCATTTTTCTACGAGCTCAGCACTACTTTCATTGAAGTACACGAATTCATAAACGAAACCGGCTCGTTGATCCGACACAAGGACATGGAGGAGCCGGAGAAGATGGAAATTAATAATAAAATAAGGAAGACCTTAGAATTGGTTAATAATGTTACTGGGAACTTGAAGAGGATAATAGAACGTGAAGACGACGGGGACAGGACAATAAGACGGTACCTCATTAAGGCGGGCATCGAAGCAACCGCTGACCGGCGAATGGACAAGTACGGTCAAGTAACGAAGAAATGCCTGGAGCAATGGCGCCACTCGCAATCCGCGCTGCGGGCGATGTTGGCACTGACCGATATCGTTAGCGACGAAACGTACGATTTTGATAACGCGACGAGCTCAGGTAGCGTGCAGTATATTAATATATTCGAATAA
Protein
MNTNNHGWTLCPSKRFPGKFYYFNVLNGEAAWSLTDNEGTAVEKNKEIHKITDNKHNYAEPSNPPENSRPMTGPKYYPKIVPEFGQAVFPNENTFARQENGKANNESFKNEECLMINSQRVQDHKDLMKLEKHDLRLLLLAKKRGTSERVHPSIEKKTKTVSDEPSKLLTSMRVTFNLNNQDYNEEDKQNQNVTWNLRNLFLEDINSYFLIDIETFLEKLNLIECYIAEDENRRLLIPELMRNEIDAFSRVEARDIKIVCAARKITRMLARATQQFIILQNKWGEHLRMSTNDLILNYCIEMGHRAILITDDSNLRKRAVNLKIKCLSTQQISSERNDCDIRLYRNKSQNDVTHHSEATRSWRIGDGAYKLTCDNNTDGQRKLSFKNTKGTENFEFNTNEIGNEWNERFLNFVPADHSLSSIDNELKGFSVVNDLIEHRLRSRFDEWTCSFTQIMESTILNIIQPNDRQPINSLIEALMKLRNYCEDENINNIIEKLKDLFENNCQRGKIKKDINGNEFMKIIGCGFILLKNLQIYYANDRDLEEACESMDHLIRNIVDPAADPHAPDHSASDAQHPPAGTDAQHERRIFRKKSTEVLNYVMKHYPQWESCEGNDVTRIADEKAQKIPDSRKVFRALGKDLNHVKIDRNNNMSMTKANFLPKKTTQKAVNNTGKIIENGNIETARPMLEHQNDKIQTQNRIEKKIDLNTKEGINGKKLNNEGSKFENSNVITGAVRCDSDVRLAMNMNSSDLNRDDLNDVDDVMSVNDLYDSGIENDSYQAYSLAKSFFYELSTTFIEVHEFINETGSLIRHKDMEEPEKMEINNKIRKTLELVNNVTGNLKRIIEREDDGDRTIRRYLIKAGIEATADRRMDKYGQVTKKCLEQWRHSQSALRAMLALTDIVSDETYDFDNATSSGSVQYINIFE

Summary

Uniprot
Pfam
PF13638   PIN_4
Interpro
IPR002716   PIN_dom        + More
IPR029060   PIN-like_dom_sf       
SUPFAM
SSF88723   SSF88723       
ProteinModelPortal

Ontologies

GO

Topology

Length:
926
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00879999999999998
Exp number, first 60 AAs:
0.00734
Total prob of N-in:
0.00049
outside
1  -  926
 
 

Population Genetic Test Statistics

Pi
25.018479
Theta
23.284818
Tajima's D
0.159089
CLR
1.092622
CSRT
0.418279086045698
Interpretation
Uncertain
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