Gene

KWMTBOMO14155

Pre Gene Modal

BGIBMGA011409

Annotation

PREDICTED:_scavenger_receptor_class_B_member_1-like_[Amyelois_transitella]

Location

Bomo_Chr23(+):19450530-19458716      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.214

CDS

ATGTTTTTTGTACAATCGGCATTCACAATACTGGCCAGTTCATATGGAAGCGAATTATTTGTAAAGAAGACTGTTCACCAATACCTTTGGGATTTTAGAGAACCAGTTTTGGATTTATCCAAGAACTTAGCTCCGGGTCTGGTGCCCGTCAACAATATGGGCATATTGGCTAGGATATACGCCAATTTCCAAGACGAGATGACGGTGAAAATAGGTCCGCGCTGGGGCCACGACGAGTTCTTTCAAATAGACAGGTTCTGGGGGAACCCGCAGCTGCCTGGATACGATCCCGAGGTGTGTCCAGATCGAATCGCGGGTTCTACTGAAGGCGTAATGTACCGGCAGCGCCTCACAAAAAACGATACCTTATTATACTGGAGGAAGACTGTCTGCAAAATTATGCCACTTTACTTTGATAGCGAAATGACCTTAGAAGGAGTGCCGGTGTACAGATACAACTTGTCGGAGAGTGTGCACGAACGTCTGACGAACGGAACAGACTGTTACGCCAGCAGCCCGACCTTGCCGGACGGCGTCAGTGACGCTTCGAAATGCTATTACAATTTCCCAATGGTGTCGTCCTATCCACATTTCTACGCGGGCGGTGTTCTCAAAGACCAGTTTGTGACCGGCCTCAAGCCTGATAGAATTAAGCACAATTCTTACGTGATTGTTGAACCGCTAACGGGTACTCCGTTTCACTCTGTGGCGCGAATGCAAAGTAATCTGCACATTAGAGATTTGTCAGGGTTCAATTACAACTATGACAAGCTCTCGAATTTAATATTACCACTTTTCTGGGCAGAATATAATCAAGAAAATCTGCCTTCGAAAATAAAAAACGTGATATACTTCATGGTCGTGATACTGCCGCCCCTAACGATCATAGTTTTATCAATAATAATAATATTAGGTTTCTATTTAATAGCGAAAAACGTATACGAAACGAAACTGCGTTACGACAAAATAAAAACGTTATTGCATTTCAATAGTGACGCTTCGAACGTGAAGACGAATACAATATTTAATTATGAGAAAGAAACGTTCTTGAAGAGTCCTAGTTAA

Protein

MFFVQSAFTILASSYGSELFVKKTVHQYLWDFREPVLDLSKNLAPGLVPVNNMGILARIYANFQDEMTVKIGPRWGHDEFFQIDRFWGNPQLPGYDPEVCPDRIAGSTEGVMYRQRLTKNDTLLYWRKTVCKIMPLYFDSEMTLEGVPVYRYNLSESVHERLTNGTDCYASSPTLPDGVSDASKCYYNFPMVSSYPHFYAGGVLKDQFVTGLKPDRIKHNSYVIVEPLTGTPFHSVARMQSNLHIRDLSGFNYNYDKLSNLILPLFWAEYNQENLPSKIKNVIYFMVVILPPLTIIVLSIIIILGFYLIAKNVYETKLRYDKIKTLLHFNSDASNVKTNTIFNYEKETFLKSPS

Similarity

Belongs to the CD36 family.

Uniprot

A0A3S2TT24   A0A2W1BBX7   A0A2A4JYP1   A0A2H1V6S5   A0A0N1IQ22   A0A194PUK3   + More
A0A1W4WNH6   D2A5M8   A0A1B6GRE8   A0A2S2PPX0   A0A2H8TL11   A0A1B6MHQ7   J9K8T5   N6T4A9   J3JYX0   A0A224XAE1   A0A1S4EVC1   Q17PS3   A0A1J1ITJ7   A0A1B0DID4   A0A182TFD4   A0A182WS41   A0A182LHW7   Q7PPV3   A0A182HXT7   A0A1S4GMD3   A0A182JQ14   A0A146KWQ3   A0A182JEV2   E0W152   A0A336MXV2   A0A336MGZ2   A0A084VUD7   A0A0A9Z9V8   A0A182QYU6   A0A182NV31   A0A2M4CLW3   A0A2M4BN34   A0A2M4BMX8   W5JL92   A0A2J7PW74   A0A2M4AQ52   A0A182WMJ9   A0A2M4AQ97   A0A182FCS4   A0A1B0CMS0   A0A067RLQ9   A0A182RQG0   A0A2S2QPK3   J3JXK3   N6TD95   A0A182VK38   A0A2J7PNU5   A0A067QYX6   A0A1B6CDS3   A0A1B6E1D3   T1HPT0   A0A2S2QTV0   A0A3Q9EJV0   A0A2J7PW76   N6TZF9   N6T293   A0A023F2D4   A0A2S2Q087   A0A0K8WGU0   A0A034VI50   A0A3Q9EL58   A0A026X1F9   A0A0A1XC80   A0A0N0U3K8   B4JU08   A0A1W4WGT2   E0W134   A0A3S2NFK2   A0A2S2QNL3   A0A067RCA5   A0A151I684   A0A139WG73   A0A0M3QVG3   A0A2H1WLC8   A0A212EY21   Q7Q7R9   Q17HA4   B4KQT0   Q9W0X1   B4IHC0  

Pubmed

28756777    26354079    18362917    19820115    23537049    22516182    + More
17510324    20966253    12364791    26823975    20566863    24438588    25401762    20920257    23761445    24845553    30542294    25474469    25348373    24508170    30249741    25830018    17994087    22118469    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

RSAL01000005    RVE54417.1    KZ150337    PZC71324.1    NWSH01000384    PCG76798.1    + More
ODYU01000781    SOQ36092.1    KQ460036    KPJ18404.1    KQ459593    KPI96429.1    KQ971345    EFA05690.2    GECZ01004780    JAS64989.1    GGMR01018902    MBY31521.1    GFXV01002173    MBW13978.1    GEBQ01004489    JAT35488.1    ABLF02032277    APGK01052766    APGK01052767    APGK01052768    KB741216    ENN72458.1    BT128451    KB632404    AEE63408.1    ERL95040.1    GFTR01007079    JAW09347.1    CH477189    EAT48768.1    CVRI01000059    CRL03535.1    AJVK01015508    AAAB01008905    EAA09702.6    APCN01005347    APCN01005348    GDHC01019419    JAP99209.1    DS235866    EEB19358.1    UFQT01001469    SSX30708.1    UFQT01001251    SSX29652.1    ATLV01016722    KE525103    KFB41581.1    GBHO01003491    JAG40113.1    AXCN02001921    GGFL01002091    MBW66269.1    GGFJ01005232    MBW54373.1    GGFJ01005231    MBW54372.1    ADMH02000839    ETN64886.1    NEVH01020937    PNF20587.1    GGFK01009586    MBW42907.1    GGFK01009571    MBW42892.1    AJWK01019130    AJWK01019131    AJWK01019132    AJWK01019133    AJWK01019134    KK852602    KDR20475.1    GGMS01010454    MBY79657.1    BT127972    AEE62934.1    APGK01042408    APGK01042409    APGK01042410    KB741005    ENN75688.1    NEVH01023284    PNF18020.1    KK853094    KDR11500.1    GEDC01025692    JAS11606.1    GEDC01005560    JAS31738.1    ACPB03008273    GGMS01011955    MBY81158.1    MK049031    AZQ24972.1    PNF20584.1    APGK01055245    KB741261    KB632413    ENN71632.1    ERL95261.1    ENN71633.1    ERL95262.1    GBBI01003543    JAC15169.1    GGMS01001943    MBY71146.1    GDHF01001943    JAI50371.1    GAKP01016788    JAC42164.1    MK049029    AZQ24970.1    KK107031    QOIP01000008    EZA62097.1    RLU19322.1    GBXI01005740    JAD08552.1    KQ435878    KOX69994.1    CH916374    EDV91587.1    EEB19340.1    RSAL01000135    RVE46258.1    GGMS01010060    MBY79263.1    KDR20474.1    KQ978495    KYM93627.1    KQ971348    KYB26889.1    CP012524    ALC42369.1    ODYU01009439    SOQ53869.1    AGBW02011640    OWR46357.1    AAAB01008952    EAA10557.4    CH477251    EAT46038.2    CH933808    EDW09279.1    AE013599    AY069143    AAF47308.1    AAL39288.1    CH480838    EDW49296.1   

Proteomes

UP000283053    UP000218220    UP000053240    UP000053268    UP000192223    UP000007266    + More
UP000007819    UP000019118    UP000030742    UP000008820    UP000183832    UP000092462    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000075881    UP000075880    UP000009046    UP000030765    UP000075886    UP000075884    UP000000673    UP000235965    UP000075920    UP000069272    UP000092461    UP000027135    UP000075900    UP000075903    UP000015103    UP000053097    UP000279307    UP000053105    UP000001070    UP000078542    UP000092553    UP000007151    UP000009192    UP000000803    UP000001292   

PRIDE

Q9W0X1   

Pfam

PF01130   CD36        + More
PF00069   Pkinase

Interpro

IPR002159   CD36_fam        + More
IPR005428   CD36/SCARB1/SNMP1       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       

SUPFAM

SSF56112   SSF56112       

ProteinModelPortal

A0A3S2TT24   A0A2W1BBX7   A0A2A4JYP1   A0A2H1V6S5   A0A0N1IQ22   A0A194PUK3   + More
A0A1W4WNH6   D2A5M8   A0A1B6GRE8   A0A2S2PPX0   A0A2H8TL11   A0A1B6MHQ7   J9K8T5   N6T4A9   J3JYX0   A0A224XAE1   A0A1S4EVC1   Q17PS3   A0A1J1ITJ7   A0A1B0DID4   A0A182TFD4   A0A182WS41   A0A182LHW7   Q7PPV3   A0A182HXT7   A0A1S4GMD3   A0A182JQ14   A0A146KWQ3   A0A182JEV2   E0W152   A0A336MXV2   A0A336MGZ2   A0A084VUD7   A0A0A9Z9V8   A0A182QYU6   A0A182NV31   A0A2M4CLW3   A0A2M4BN34   A0A2M4BMX8   W5JL92   A0A2J7PW74   A0A2M4AQ52   A0A182WMJ9   A0A2M4AQ97   A0A182FCS4   A0A1B0CMS0   A0A067RLQ9   A0A182RQG0   A0A2S2QPK3   J3JXK3   N6TD95   A0A182VK38   A0A2J7PNU5   A0A067QYX6   A0A1B6CDS3   A0A1B6E1D3   T1HPT0   A0A2S2QTV0   A0A3Q9EJV0   A0A2J7PW76   N6TZF9   N6T293   A0A023F2D4   A0A2S2Q087   A0A0K8WGU0   A0A034VI50   A0A3Q9EL58   A0A026X1F9   A0A0A1XC80   A0A0N0U3K8   B4JU08   A0A1W4WGT2   E0W134   A0A3S2NFK2   A0A2S2QNL3   A0A067RCA5   A0A151I684   A0A139WG73   A0A0M3QVG3   A0A2H1WLC8   A0A212EY21   Q7Q7R9   Q17HA4   B4KQT0   Q9W0X1   B4IHC0  

PDB

5LGD     E-value=6.8894e-18,     Score=222

KEGG

101743088    no KO assigned | (RefSeq) scavenger receptor class B member 1-like

GO

GO:0016021   GO:0004672   GO:0005524   GO:0016020   GO:0003677   GO:0005634   GO:0008270   GO:0018024   GO:0019829   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR11923  

Length:

354

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.44818

Exp number, first 60 AAs:

0.04658

Total prob of N-in:

0.01904

outside

1  -  287

TMhelix

288  -  310

inside

311  -  354

 

 

Pi

21.071456

Theta

20.313595

Tajima's D

0.180072

CLR

1.699111

CSRT

0.421728913554322

Interpretation

Uncertain