Gene

KWMTBOMO14147

Pre Gene Modal

BGIBMGA011404

Annotation

Neurofibromin_[Papilio_xuthus]

Location

Bomo_Chr23(+):19242056-19246128      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.041

CDS

ATGGGAACGCAGAAACCTGGAGAATGGGCTAATTCGTTGATAGCGCGTTTCGAAGAACAGCTCCCTTATAGGACGGGAGCACAGAACCTGCACTCAAGGATTAATGAGGAACAATGTAAAGCATGCCTCGTCCAGATAAGCAGATACCGGTTCTCATTAGTCATTTCAGGGCTGACGAAAATACTGCAGAGAGTAAATGAACTGTATCAGCCAACATTCACAAGCAGCATCAATAGACCTCAAACAGAGCTGGAGAAGGGCTACCACGATAGTCTTGTGATAGTCCTGGACACACTTGAGATATGCCTCAGCTCACAGCCCAAGGATACTGCCAAATATGATGAAGCAATGAATGTAAAAATTCTGCTTCGGGAAGTCTGTCAGTTTATGGATTCACCCTAA

Protein

MGTQKPGEWANSLIARFEEQLPYRTGAQNLHSRINEEQCKACLVQISRYRFSLVISGLTKILQRVNELYQPTFTSSINRPQTELEKGYHDSLVIVLDTLEICLSSQPKDTAKYDEAMNVKILLREVCQFMDSP

Uniprot

A0A194PTX2   H9JPF0   A0A2A4J4I6   A0A0N1IBQ7   A0A2W1BS17   A0A1B6MMK6   + More
A0A1B6CFS5   A0A2J7Q2H1   A0A2J7PY13   A0A226E5T9   A0A087ULX9   A0A1B6CM43   K7J294   A0A232EX77   A0A023EXJ2   A0A1B6H8S9   A0A1S4FJK1   F4WPG4   A0A0P5N844   E9H0M4   A0A158NR60   A0A182NSE1   A0A182LY02   A0A182XE90   A0A182JYC4   A0A182TUB1   A0A182RYC1   A0A182PSW3   A0A182LC78   A0A182VES4   A0A182W2S9   A0A182HJ32   A0A182Q4E2   E2ADQ4   A0A1B6I0Q1   A0A3L8DWI0   A0A1Y1KHF5   A0A0P6IU49   F5HL00   Q7QBJ9   A0A1Y1KPV6   A0A084WSZ8   Q16Z01   A0A1Y1KHG0   B0WYP5   A0A1Y1KHE9   A0A088A4V7   A0A2A3E8Q2   A0A2M4CMF2   A0A182FL69   A0A2M4A6W8   A0A182XVJ7   A0A139WPT3   A0A139WPE8   A0A1B0D165   A0A3B0KLU3   A0A1B0C857   A0A147BNF4   V5GMC6   A0A2M4A6Z0   W5JE11   A0A0Q9X895   A0A0Q9XA70   A0A0Q9XCE0   A0A0Q9X9D7   B4K6B9   B3LYI6   A0A1W4V911   A0A1W4VKR6   A0A1W4VM54   A0A1J1ITN5   A0A1J1IWR0   A0A1Y3BFY2   A0A0K8VSX4   B5DX59   A0A2P2IEF1   B4GEH6   A0A3B0KSB7   Q1WWH0   A0A1I8PHZ4   A0A1I8PI47   A0A1I8PHU0   A0A3S3PH18   A0A1W4WNP1   B4QW05   B4LYR3   A0A0B4KHX4   A0A0B4KI28   O01397   Q9VBJ2   B3P6C2   B4PSY7   O01398   O01399   Q59DT9   Q8IMS2   A0A1I8N339   B4JGH8   A0A0C9RNP7  

Pubmed

26354079    19121390    28756777    20075255    28648823    25474469    + More
17510324    21719571    21292972    21347285    20966253    20798317    30249741    28004739    12364791    24438588    25244985    18362917    19820115    29652888    20920257    23761445    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    9115203    17550304    25315136   

EMBL

KQ459593    KPI96423.1    BABH01009999    BABH01010000    NWSH01003377    PCG66424.1    + More
KQ460036    KPJ18410.1    KZ149959    PZC76415.1    GEBQ01002878    JAT37099.1    GEDC01024951    JAS12347.1    NEVH01019370    PNF22780.1    NEVH01020852    PNF21215.1    LNIX01000006    OXA52668.1    KK120488    KFM78368.1    GEDC01022860    JAS14438.1    AAZX01001574    AAZX01008897    AAZX01014691    NNAY01001785    OXU22929.1    GBBI01004800    JAC13912.1    GECU01036588    JAS71118.1    GL888243    EGI64059.1    GDIQ01145802    JAL05924.1    GL732581    EFX74727.1    ADTU01023728    ADTU01023729    ADTU01023730    AXCM01000247    APCN01002121    AXCN02000238    GL438820    EFN68416.1    GECU01027208    JAS80498.1    QOIP01000003    RLU24672.1    GEZM01083962    GEZM01083961    GEZM01083957    GEZM01083956    JAV60893.1    GDIQ01001376    JAN93361.1    AAAB01008879    EGK96961.1    EAA08440.4    GEZM01083960    GEZM01083959    JAV60897.1    ATLV01026776    ATLV01026777    ATLV01026778    ATLV01026779    ATLV01026780    KE525419    KFB53342.1    CH477505    EAT39867.1    GEZM01083955    JAV60909.1    DS232196    EDS37155.1    GEZM01083958    JAV60902.1    KZ288323    PBC28105.1    GGFL01002342    MBW66520.1    GGFK01003222    MBW36543.1    KQ971307    KYB29815.1    KYB29814.1    AJVK01021962    AJVK01021963    AJVK01021964    OUUW01000023    SPP89590.1    AJWK01000199    AJWK01000200    AJWK01000201    AJWK01000202    AJWK01000203    GEGO01003091    JAR92313.1    GALX01005699    JAB62767.1    GGFK01003233    MBW36554.1    ADMH02001497    ETN62306.1    CH933806    KRG01444.1    KRG01441.1    KRG01443.1    KRG01442.1    EDW15192.1    CH902617    EDV42901.2    CVRI01000059    CRL03597.1    CRL03598.1    MUJZ01026521    OTF78733.1    GDHF01010327    JAI41987.1    CM000070    EDY68218.3    IACF01006808    LAB72391.1    CH479182    EDW34011.1    SPP89589.1    BT024936    ABE01166.1    NCKU01002548    NCKU01002470    RWS09353.1    RWS09518.1    CM000364    EDX14504.1    CH940650    EDW66990.2    AE014297    AGB96359.1    AGB96358.1    L26500    AAB58977.1    AAF56543.3    CH954182    EDV53592.1    CM000160    EDW98674.2    L26501    AAB58975.1    L26502    AAB58976.1    AAX52994.1    AAN14067.2    CH916369    EDV93675.1    GBYB01010045    JAG79812.1   

Proteomes

UP000053268    UP000005204    UP000218220    UP000053240    UP000235965    UP000198287    + More
UP000054359    UP000002358    UP000215335    UP000007755    UP000000305    UP000005205    UP000075884    UP000075883    UP000076407    UP000075881    UP000075902    UP000075900    UP000075885    UP000075882    UP000075903    UP000075920    UP000075840    UP000075886    UP000000311    UP000279307    UP000007062    UP000030765    UP000008820    UP000002320    UP000005203    UP000242457    UP000069272    UP000076408    UP000007266    UP000092462    UP000268350    UP000092461    UP000000673    UP000009192    UP000007801    UP000192221    UP000183832    UP000001819    UP000008744    UP000095300    UP000285301    UP000192223    UP000000304    UP000008792    UP000000803    UP000008711    UP000002282    UP000095301    UP000001070   

PRIDE

H9JPF0    Q1WWH0    O01397    Q9VBJ2    O01398    O01399    + More
Q59DT9    Q8IMS2   

Pfam

PF00616   RasGAP        + More
PF13716   CRAL_TRIO_2

Interpro

IPR039360   Ras_GTPase        + More
IPR001936   RasGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR016024   ARM-type_fold       
IPR011993   PH-like_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR036865   CRAL-TRIO_dom_sf       

SUPFAM

SSF48350   SSF48350        + More
SSF48371   SSF48371       
SSF52087   SSF52087       

Gene 3D

2.30.29.30     3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A194PTX2   H9JPF0   A0A2A4J4I6   A0A0N1IBQ7   A0A2W1BS17   A0A1B6MMK6   + More
A0A1B6CFS5   A0A2J7Q2H1   A0A2J7PY13   A0A226E5T9   A0A087ULX9   A0A1B6CM43   K7J294   A0A232EX77   A0A023EXJ2   A0A1B6H8S9   A0A1S4FJK1   F4WPG4   A0A0P5N844   E9H0M4   A0A158NR60   A0A182NSE1   A0A182LY02   A0A182XE90   A0A182JYC4   A0A182TUB1   A0A182RYC1   A0A182PSW3   A0A182LC78   A0A182VES4   A0A182W2S9   A0A182HJ32   A0A182Q4E2   E2ADQ4   A0A1B6I0Q1   A0A3L8DWI0   A0A1Y1KHF5   A0A0P6IU49   F5HL00   Q7QBJ9   A0A1Y1KPV6   A0A084WSZ8   Q16Z01   A0A1Y1KHG0   B0WYP5   A0A1Y1KHE9   A0A088A4V7   A0A2A3E8Q2   A0A2M4CMF2   A0A182FL69   A0A2M4A6W8   A0A182XVJ7   A0A139WPT3   A0A139WPE8   A0A1B0D165   A0A3B0KLU3   A0A1B0C857   A0A147BNF4   V5GMC6   A0A2M4A6Z0   W5JE11   A0A0Q9X895   A0A0Q9XA70   A0A0Q9XCE0   A0A0Q9X9D7   B4K6B9   B3LYI6   A0A1W4V911   A0A1W4VKR6   A0A1W4VM54   A0A1J1ITN5   A0A1J1IWR0   A0A1Y3BFY2   A0A0K8VSX4   B5DX59   A0A2P2IEF1   B4GEH6   A0A3B0KSB7   Q1WWH0   A0A1I8PHZ4   A0A1I8PI47   A0A1I8PHU0   A0A3S3PH18   A0A1W4WNP1   B4QW05   B4LYR3   A0A0B4KHX4   A0A0B4KI28   O01397   Q9VBJ2   B3P6C2   B4PSY7   O01398   O01399   Q59DT9   Q8IMS2   A0A1I8N339   B4JGH8   A0A0C9RNP7  

KEGG

101742513    K08052 neurofibromin 1 | (RefSeq) neurofibromin

GO

GO:0007165   GO:0043087   GO:0046578   GO:0045886   GO:0008344   GO:0042752   GO:0007614   GO:0019933   GO:0005096   GO:0045762   GO:0008355   GO:0045475   GO:0040018   GO:0042066   GO:0009408   GO:0007265   GO:0006979   GO:0007616   GO:0008340   GO:0040014  

PANTHER

PTHR10194  

Length:

133

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00316

Exp number, first 60 AAs:

0.00216

Total prob of N-in:

0.16807

outside

1  -  133

 

 

Pi

17.704591

Theta

19.25099

Tajima's D

-0.506988

CLR

0.635038

CSRT

0.243737813109345

Interpretation

Uncertain