SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14143
Pre Gene Modal
BGIBMGA011187
Annotation
PREDICTED:_transmembrane_protein_145-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.712
 

Sequence

CDS
ATGGAGGTAACTAGAAGCTCAATTTTAGACAGCTTCGGGAGGAATCCTTACGAGCCGAACGGAGCGCCGCAGACTGTGATCATTCCGCTGACCAGAAGAACTGAAGAACTAATAGGAAGTATGTACAGTCAGTACGTGGCATCAGCGCCGCCGTTGTCTCTCGAACACGACCCTCCGAAGATTAACGGTTTTTCCAAAACCGTCGAAGCGAAAACATTGCTACCCCAAGAGAGCACAGAGACCAATTCTTCAGATGACATACGACCTTTTGTCTCCAAAGGAATATTCACTGTTGAAAGTCAAATTTCGAGAATGGAACCAGCTGTGTTGCCAATCGAAAACAATTCTACTGTTTCGTTACAAAAATTGCAAAGTACTAAAACGGACGGTTTAATCCATGACGATGAAAATAAAGTTGGAACGACGGCTGTTCTTAATTCGACTCAATCAATAGAAAACGTTTCAATAGATTCGAATAGTGATCGGTCCAGGAATGATTTGCCAAGCATCACGAGGTCTAGGAGGAATATTTTAGAGCCCATCAAAAGAGAAGATCCATCAGTACCGTCTTGGTCGTTGGCTAAGGGACCTTGTGTTGTTGCAATGCAGAAGAAAAAAAGTATTGAAAGAGATGATTCAATAGAACTCAACGGCGTAACGAACGGTAAGAAAGTACCAACAGTGCGGAATGGATTGCCGAGTTCGGGCGAAATTTCTACCATACACGAGGGTCACGTGCAAAGCTACCAAAACATTGTCAGTAAAGCTACCATGGATCTCTTTAATGCTAATAGTAATAAGGATTGA
Protein
MEVTRSSILDSFGRNPYEPNGAPQTVIIPLTRRTEELIGSMYSQYVASAPPLSLEHDPPKINGFSKTVEAKTLLPQESTETNSSDDIRPFVSKGIFTVESQISRMEPAVLPIENNSTVSLQKLQSTKTDGLIHDDENKVGTTAVLNSTQSIENVSIDSNSDRSRNDLPSITRSRRNILEPIKREDPSVPSWSLAKGPCVVAMQKKKSIERDDSIELNGVTNGKKVPTVRNGLPSSGEISTIHEGHVQSYQNIVSKATMDLFNANSNKD

Summary

Pfam
PF10192   GpcrRhopsn4
Interpro
IPR019336   Intimal_thickness-rel_rcpt       

Ontologies

Topology

Length:
268
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.04057
outside
1  -  268
 
 

Population Genetic Test Statistics

Pi
21.876455
Theta
19.81202
Tajima's D
0.169153
CLR
0.176038
CSRT
0.426778661066947
Interpretation
Uncertain
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