Gene

KWMTBOMO14142  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011403

Annotation

PREDICTED:_suppressor_of_G2_allele_of_SKP1_homolog_[Papilio_polytes]

Location

Bomo_Chr23(+):19197186-19202819      View in EpiBrowser

Full name

Protein SGT1 homolog      

Alternative Name

Protein 40-6-3
Sgt1
Suppressor of G2 allele of SKP1 homolog

Location in the cell

Nuclear   Reliability : 2.582

CDS

ATGTCTGAAGAACAGAAGAATTCCTGTGTTTCTGAAGAAATTAAGCCGAAGATCAAACATGATTGGTACCAGACGGAGTCACAAGTGGTTGTCACTATATTAATCAAGAATGCCCTAAGCGACCAAGTCAAAGTCCAGTACAGTGAACGAAGTCTATCCTTTTCTTGTCCGTTACCTAACTCAGACTCCGAGTACAGTTTGGAACTTGAATTAGCACATGAAATAATACCAACAATGTGCAGTTACGTAGTGAGCCCGTCGAAGATAGAGATCAAGCTACGTAAGAAGGAAGGTCTAAGATGGAACCAGCTGGAAGGGGAAGGGACTGAGAAAAAAGTTAAGGCCATTCCTCAGGCTGTAATCGACGCTTCCGGACCGCAGCAACCGCCTCAACTATTCAGAAAAGACTGGAACAAGATCGAGAAGGATATTAAAAAAATGGAAGAAGAAGAGAAACCAGAAGGAGATGCTGCACTTAATGCTCTCTTTAGAAAAATATACGGTGAAGGATCTGATGAAGTCCGACGTGCCATGAACAAGAGTTTTGTCGAGTCCGGAGGCACTGTGCTCAGCACCAATTGGACCCAAGTGGCTCAAGACAAGGTCGAAGTGAAGCCACCAGACGGACTGGAGTTCAGGAAGTGGGACTCGTAA

Protein

MSEEQKNSCVSEEIKPKIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHEIIPTMCSYVVSPSKIEIKLRKKEGLRWNQLEGEGTEKKVKAIPQAVIDASGPQQPPQLFRKDWNKIEKDIKKMEEEEKPEGDAALNALFRKIYGEGSDEVRRAMNKSFVESGGTVLSTNWTQVAQDKVEVKPPDGLEFRKWDS

Subunit

Probably associates with SCF (SKP1-CUL1-F-box protein) complex through interaction with SKP1. Interacts with S100A6. Interacts with HSP90.

Similarity

Belongs to the SGT1 family.

Keywords

3D-structure   Acetylation   Alternative splicing   Complete proteome   Cytoplasm   Direct protein sequencing   Isopeptide bond   Nucleus   Phosphoprotein   Reference proteome   Repeat   TPR repeat   Ubl conjugation   Ubl conjugation pathway  

Feature

chain  Protein SGT1 homolog
splice variant  In isoform 2.

Uniprot

H9JPE9   A0A3S2LV28   A0A2A4JM71   A0A2W1BUD2   A0A1E1WTE6   A0A0N1PHY5   + More
A0A194PZ36   A0A2H1WL91   S4PEA4   A0A0P4WB09   A0A232EJM8   K7J7L7   A0A0P4WUK9   A0A0N7ZCX6   A0A0P4WE96   A0A0J7KS20   A0A151JQB2   A0A067QZR9   A0A151X533   A0A2J7PM71   A0A154PFS5   I7CH62   A0A088ASN8   A0A026X5H4   A0A158NR77   A0A195BFD4   V9IIW5   A0A0M8ZUX0   A0A310SFT2   F4WRG2   V4AB48   D6WUH6   N6T2A4   J3JUY9   I3KR02   A0A1S3R5H0   A0A1S3R3P2   A0A1S3R3P6   A0A060YDC6   C0PTZ6   A0A1V4J4K9   A0A3P8XIG6   R0JM86   F1NAS0   U3JZY8   A0A3B4F0B2   A0A3P8Q5D6   A0A1Y1MUY8   U3IJI3   A0A3P8ZIW7   A0A3Q2UYX6   A0A3L8SSZ1   A0A087US97   A0A164ZP74   A7S726   E9GEG6   A0A3P8XKY4   A0A093CKW0   A0A3P8U7J8   A0A226PIA5   A0A226MSZ2   L5KGX5   A0A0P6CRX0   A8K7W3   A0A0P4XBC5   A0A3Q1IMK5   B4DYC6   A0A2I0MRT5   G1SPS8   G1NQ17   E2RM43   G9KRU9   A0A2K5ZLK1   A0A1W4XVA4   A0A218VDZ0   A0A0P5JCC1   K9IZZ5   S7NDJ4   A0A3Q1BCE4   A0A2K5PAH0   A0A0P5FBS8   A0A151MHR4   A0A0Q3QZL4   A0A3Q2G3S2   A0A1W4ZDV8   G3RNH5   A0A2K5PAF1   A0A2Y9HPB1   A0A091LCY4   F6Q2R7   A0A2U3X6Z5   A8K5T7   A0A2K5PAH8   A0A3B5B6H6   W5L7Q2   A0A093QTK1   A0A1S3EQU2   Q9Y2Z0-2   H2NJZ5   H2Q7L9  

Pubmed

19121390    28756777    26354079    23622113    28648823    20075255    + More
24845553    22539186    24508170    30249741    21347285    21719571    23254933    18362917    19820115    23537049    22516182    25186727    24755649    25069045    15592404    28004739    23749191    30282656    17615350    21292972    24621616    23258410    23371554    21993624    20838655    16341006    23236062    22293439    22398555    19892987    25329095    10445024    15018354    15346769    15057823    15489334    12665801    12746458    15592455    18669648    19413330    20068231    21269460    21864708    22223895    22814378    23186163    24275569    25218447    25114211    25944712    28112733    14761955    16136131   

EMBL

BABH01009992    RSAL01000005    RVE54406.1    NWSH01001122    PCG72490.1    KZ149959    + More
PZC76390.1    GDQN01000784    JAT90270.1    KQ460036    KPJ18413.1    KQ459593    KPI96420.1    ODYU01009417    SOQ53829.1    GAIX01007195    JAA85365.1    GDRN01057595    JAI65675.1    NNAY01003963    OXU18566.1    AAZX01002179    GDRN01057593    JAI65677.1    GDRN01057598    GDRN01057597    GDRN01057594    JAI65672.1    GDRN01057596    JAI65674.1    LBMM01003865    KMQ93039.1    KQ978660    KYN29379.1    KK852807    KDR16057.1    KQ982540    KYQ55409.1    NEVH01024421    PNF17435.1    KQ434896    KZC10709.1    JN587293    JN587294    KZ288466    AFN09071.1    AFO52508.1    PBC25427.1    KK107019    QOIP01000007    EZA62684.1    RLU20980.1    ADTU01023815    KQ976504    KYM82880.1    JR046909    AEY60279.1    KQ435878    KOX70029.1    KQ765605    OAD53886.1    GL888285    EGI63233.1    KB201890    ESO94017.1    KQ971357    EFA08477.1    APGK01055295    KB741261    KB630089    KB632310    ENN71648.1    ERL83381.1    ERL92130.1    BT127054    AEE62016.1    AERX01030771    AERX01030772    AERX01030773    FR907706    CDQ87150.1    BT071868    ACN58591.1    LSYS01009367    OPJ67060.1    KB743501    EOA98430.1    AADN05000383    AGTO01000536    GEZM01020001    JAV89471.1    ADON01098483    QUSF01000006    RLW08185.1    KK121329    KFM80236.1    LRGB01000687    KZS16575.1    DS469591    EDO40460.1    GL732540    EFX82314.1    KL246406    KFV15103.1    AWGT02000062    OXB79803.1    MCFN01000468    OXB58435.1    KB030771    ELK10016.1    GDIQ01088257    JAN06480.1    AK292128    BAF84817.1    GDIP01245108    JAI78293.1    AK302363    BAG63688.1    AKCR02000003    PKK32389.1    AAGW02019837    AAGW02019838    AAEX03013177    JP019030    AES07628.1    MUZQ01000003    OWK64297.1    GDIQ01204162    JAK47563.1    GABZ01006906    JAA46619.1    KE164143    EPQ15389.1    GDIQ01256668    JAJ95056.1    AKHW03006155    KYO24044.1    LMAW01002647    KQK78601.1    CABD030089134    CABD030089135    CABD030089136    KL317368    KFP54199.1    AK291402    BAF84091.1    KL433262    KFW92198.1    AF132856    AJ344097    AY321358    AY271314    BT009798    AL139089    CH471124    BC000911    CAC51433.1    ABGA01372466    ABGA01372467    ABGA01372468    ABGA01372469    NDHI03003551    PNJ23739.1    AACZ04054759    GABC01009612    GABD01010471    GABE01010314    NBAG03000301    JAA01726.1    JAA22629.1    JAA34425.1    PNI43566.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000215335    + More
UP000002358    UP000036403    UP000078492    UP000027135    UP000075809    UP000235965    UP000076502    UP000242457    UP000005203    UP000053097    UP000279307    UP000005205    UP000078540    UP000053105    UP000007755    UP000030746    UP000007266    UP000019118    UP000030742    UP000005207    UP000087266    UP000193380    UP000190648    UP000265140    UP000000539    UP000016665    UP000261460    UP000265100    UP000016666    UP000264840    UP000276834    UP000054359    UP000076858    UP000001593    UP000000305    UP000265080    UP000198419    UP000198323    UP000010552    UP000265040    UP000053872    UP000001811    UP000001645    UP000002254    UP000233140    UP000192223    UP000197619    UP000257160    UP000233040    UP000050525    UP000051836    UP000265020    UP000192224    UP000001519    UP000248481    UP000002281    UP000245341    UP000261400    UP000018467    UP000081671    UP000005640    UP000001595    UP000002277   

PRIDE

H9JPE9    A8K7W3    A8K5T7    Q9Y2Z0   

Pfam

PF05002   SGS        + More
PF04969   CS
PF07719   TPR_2

Interpro

IPR007699   SGS_dom        + More
IPR007052   CS_dom       
IPR008978   HSP20-like_chaperone       
IPR011990   TPR-like_helical_dom_sf       
IPR013026   TPR-contain_dom       
IPR019734   TPR_repeat       
IPR013105   TPR_2       

SUPFAM

SSF49764   SSF49764        + More
SSF48452   SSF48452       

Gene 3D

2.60.40.790     1.25.40.10    

ProteinModelPortal

H9JPE9   A0A3S2LV28   A0A2A4JM71   A0A2W1BUD2   A0A1E1WTE6   A0A0N1PHY5   + More
A0A194PZ36   A0A2H1WL91   S4PEA4   A0A0P4WB09   A0A232EJM8   K7J7L7   A0A0P4WUK9   A0A0N7ZCX6   A0A0P4WE96   A0A0J7KS20   A0A151JQB2   A0A067QZR9   A0A151X533   A0A2J7PM71   A0A154PFS5   I7CH62   A0A088ASN8   A0A026X5H4   A0A158NR77   A0A195BFD4   V9IIW5   A0A0M8ZUX0   A0A310SFT2   F4WRG2   V4AB48   D6WUH6   N6T2A4   J3JUY9   I3KR02   A0A1S3R5H0   A0A1S3R3P2   A0A1S3R3P6   A0A060YDC6   C0PTZ6   A0A1V4J4K9   A0A3P8XIG6   R0JM86   F1NAS0   U3JZY8   A0A3B4F0B2   A0A3P8Q5D6   A0A1Y1MUY8   U3IJI3   A0A3P8ZIW7   A0A3Q2UYX6   A0A3L8SSZ1   A0A087US97   A0A164ZP74   A7S726   E9GEG6   A0A3P8XKY4   A0A093CKW0   A0A3P8U7J8   A0A226PIA5   A0A226MSZ2   L5KGX5   A0A0P6CRX0   A8K7W3   A0A0P4XBC5   A0A3Q1IMK5   B4DYC6   A0A2I0MRT5   G1SPS8   G1NQ17   E2RM43   G9KRU9   A0A2K5ZLK1   A0A1W4XVA4   A0A218VDZ0   A0A0P5JCC1   K9IZZ5   S7NDJ4   A0A3Q1BCE4   A0A2K5PAH0   A0A0P5FBS8   A0A151MHR4   A0A0Q3QZL4   A0A3Q2G3S2   A0A1W4ZDV8   G3RNH5   A0A2K5PAF1   A0A2Y9HPB1   A0A091LCY4   F6Q2R7   A0A2U3X6Z5   A8K5T7   A0A2K5PAH8   A0A3B5B6H6   W5L7Q2   A0A093QTK1   A0A1S3EQU2   Q9Y2Z0-2   H2NJZ5   H2Q7L9  

PDB

1RL1     E-value=2.18482e-19,     Score=232

KEGG

101742272    K12795 suppressor of G2 allele of SKP1 | (RefSeq) suppressor of G2 allele of SKP1 homolog

GO

GO:0031647   GO:0050821   GO:0032991   GO:0043947   GO:0016021   GO:0000278   GO:0000776   GO:0000151   GO:0005634   GO:0005829  

Subcellular location

Cytoplasm  
Nucleus  

Length:

217

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00348

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.16471

outside

1  -  217

 

 

Pi

18.053805

Theta

20.113475

Tajima's D

-0.548762

CLR

0.380156

CSRT

0.234988250587471

Interpretation

Uncertain