SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14134
Pre Gene Modal
BGIBMGA011397
Annotation
PREDICTED:_uncharacterized_protein_LOC101741591_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.704
 

Sequence

CDS
ATGCTCGTACTTCCAGACACGATCCAGGCGGCGGCGCGCGGCGAGGGCGTGGTCGCGGCCAGTCGCACGGCGGACGTGGTGGGGGGAGGGTGCGTCTTCGCGGCCAACAGCAACAATGAGCTGGAGCCCGACTGTCAGTCGTCGTGCGGATTGGACCCGCCGCAAACGTACGACAGTAGTGAGCCGCTTGAGCGTTCCAAGCCGGACAAGGATTCGAACGAGACCTTCATAAGGCCCATCGAACCCACGCACAGGGACAAACTGCCGAACATCCCCATAATACTGGAGAAAAACAACTCGGAGACCTTGAAATACAAAATGAATGAAGAGGTCATTGTTTACGCGAACTATTTGGACAGCAAAGCGAACGCCAGCGACGTCAGCTCGAAGAGATACAAAAGGGACGCCGAAGAGATGCGGAGTAGTTCCGAAGAGATGAACTACGGCGAACCCGACAAAGAGATCGGACCCGACTGCGACACGGTCCGCGTGGGCATCCGGTCGGAACAGACGAGGAACATGTCGCTGTTCACGGAGACTGTGTGCGCCGCCAGCACGCACAACTACACGTACGCGGTGCCGCTGTCGCACTGTCTGCACCACACGCACGTGGACCTCACGTTCCTGTCGTCGAAGCTGAAGGAGCACCGTCTGTGCGCCGTGCAGTGCAACTACGAGGACACGTCGAAGCACTGCGAGCACGGGCGCGAGCTGAGCGGGCTGGCGGCGGGCGCGGGCGCGTGGGGCGTCCGGGTGCCGCTCGAGTGCAACATCGACAGGGTCATGAGGATCAGGTCCCGCTACGTGCACGGGAAGCCCGGCTTCACCAACTGGGATCTGTGCGGGCCGCATCAAGACCACAAGATGCCCTTCGTCGAATTCAACATTCGCATGTACAGCGACTGCGGTAGTTAA
Protein
MLVLPDTIQAAARGEGVVAASRTADVVGGGCVFAANSNNELEPDCQSSCGLDPPQTYDSSEPLERSKPDKDSNETFIRPIEPTHRDKLPNIPIILEKNNSETLKYKMNEEVIVYANYLDSKANASDVSSKRYKRDAEEMRSSSEEMNYGEPDKEIGPDCDTVRVGIRSEQTRNMSLFTETVCAASTHNYTYAVPLSHCLHHTHVDLTFLSSKLKEHRLCAVQCNYEDTSKHCEHGRELSGLAAGAGAWGVRVPLECNIDRVMRIRSRYVHGKPGFTNWDLCGPHQDHKMPFVEFNIRMYSDCGS

Summary

Pfam
PF13884   Peptidase_S74        + More
PF13887   MRF_C1
PF05224   NDT80_PhoG
PF13888   MRF_C2
Interpro
IPR030392   S74_ICA        + More
IPR008967   p53-like_TF_DNA-bd       
IPR024061   NDT80_DNA-bd_dom       
IPR026932   MRF_C1       
IPR026933   MRF       
IPR025719   MRF_C2       
SUPFAM
SSF49417   SSF49417       

Ontologies

Topology

Length:
304
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00356
Exp number, first 60 AAs:
0.00022
Total prob of N-in:
0.00938
outside
1  -  304
 
 

Population Genetic Test Statistics

Pi
47.660073
Theta
170.353045
Tajima's D
-0.545522
CLR
0.384258
CSRT
0.230588470576471
Interpretation
Uncertain
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