Gene

KWMTBOMO14127

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr23(+):18354532-18358976      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.2

CDS

ATGGATGTGGCCTGGACTGAGGTGGTGAAGCGGGGCAATAAGAATAAAAAAAGGGTGCCGGCTGCGGCACGCCCCCAGCCCGCCCCAGCGGCTGCTGCTTCCCATCAAGAGGGTCGAGCGGCAGCTCAAGGAAAAAACAAGAGGCGTCGAAACGGCAAACCGCGCGCTCCGCGGTCAGCGGCAGTGGTCTTGGAGCTACTGCCGGCTGCAAAGGAAAAGGGCATTACCTATATGGAGGTAATGAGCCGAGCGCGTGGTGCCGTTGATGTCGACGCCATAGGCGTGGAGGGCGGGCTCAAGGTTCGGCACACCGCTAACGGGGCCCGGCTACTGGAATGTCCAGGCGCCCAATCTGGCGCAGCCGCGGACAGACTGGTGGCGCGGCTCCGGGAGATTTTGCCGGACCCAGAGATAGTGCGCATCGAACGCCCCGTCAAAATGGCGGAAGTCAAATTGACGGGCCTCGATGAATGCGCCACCCAGGACGAAGTGGCCGCCGCCATTGCATCACAGGGGAACTGTGCCCTGGCCCACGTTAAGGTGGGGGAACTCCGGAGCACTTACTCCGGAGCCCGCACCGCATGGGCGCGATGCCCCGTGCAGGCGGCCATTCTCCTAGCCACCTCCAAGTGGGAAGCCTGCCAACACGCCTGGAAGGCTGCGCGTAGGCTGGATCATGGCTCAGGTGCAACTACAGGAGGCAAGACCTTGGCGATGCCTCCGGCGCTTCGGTACTGGTCCGGGCACAAGGCTGCCACCTGCACCGCCGTTCCGCACTGTGTACTTTGTGATGCGGCGAAGCGGCAGGCCGACCACCGGGCTGGGGGGCCAGCATGTCGTTCAGCCCCCTCCTCAACGAAGAGGAGGAGAGGTGGAAAAAATAAAAGAAAAAAAGGTGCAGAGGAGGTGCCAGCTGCAAATGGAGTAGCAGGCGAGCTAGTTCCCGCCGCGGCTGTCGAGCCGGAGGGCGGGACGGGCGAAGGAGCGACGGACGCCAATCTGAACCACTCCGCCAGGGCGCAGGATCTCCTCGTCCACACCATGGCGGAGTGGTCAATTGATGTTGCTGTCGCCGCGGAGCCGTACTTCGTCCCTGCTGATCAGGATTCCTGGATCGGGGACATCGACGGCTCCGTGGCAATCATAATCAGACAGGCTGCGGCGTTACCCCCCCTGGTGATGGTGGCCAGGGGATCCGGTTACGTCGCGGCCAGGGTCGATGAAACCGTCGTGATCGGGGTGTACTTCTCTCCGAACAGACATCTCGCTGAGTTCGAGCGGTTCTTGGGCGGGTTCGAGGCGTTGGTTAATCGCCTCGGGTCTCGCCCGGTGATTTTAGCGGGAGACCTCAATGCCAAATGGGTAGCTTGGGGTTCCCCCCGCCCGAACTCGCGCGGCAGGATGCTCTCGGAGTGGGCGATCGCGGCCGGTCTCTGTCTCTTGAACAGGGGTTCGGTCGCGACTTGCGTGCGATGGAACGGCGAATCTCACGTGGATGTGACTTTCGCATCTCCTTCCATCGCACGCCGCACCCGTGGCTGGCGTGTCCTTGAAGGGGCGGAGACGCTCTCGGACCATCGATACGTCCGATTTGAGCTCTCTGCCTCCTCTCGCTCTGCGTCAGCTATGGTCGCCCGTGGTGAGGAGGAGCTCCCGCGTAGTACGCCTCGATCATTCCCCAGGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGGTGGAGGCGGCTGCAGTGGCTGCGTGGGCACCCGTGCCCGCGAGCCCTGTGGATGTGGAGTCGGAGGCTGACTGGTTCCGGGGAACGATGTGTCGGACTTGCGATGCAGCGATGCCCCGGGTAGGTGGCCACGCTCCGCGTGGCGGTGCGTACTGGTGGTCACCCAATATCGCGCAACTCCGGCATGCAGACGCTCCTGGAGACGCTCGATCAGGATCCCTGGGGGCGCCCATACAAAACTGTCCGCAAGAAATTGCGGCCGTGGGCTCCCCGATGACCGAGCGACTCCAGCCTCGGCAGCTGCGGGAAATAGTTTCTGCGCTGTTCCCGCAGGGAGAGGGGACTTTTCGGCCCCCTTTCATGGGCACGCCACCACATCACGATGGTGGTGATGCCCCTGCCGACGTGCCCTCTCCGAAGATTTCGGGGGCAGAGATCCGTGCGGCCGTGTCAAAGATGAGGAGGAAGGACGCGGCCCCCGGCCCTGATGGTATTCACGGCCGGGTCTGGGATTTGGTCTTCGGTGCTCTGGGGGACCGGCTTGTGCGACTTTTCGAAGCTTGCCTTGAGTCGGGACGGTTTCCGACCCAGTGGAAGACGGGCAAACTCGTCCTTTTGAGGAAGGAGGGGCGCCCGGCGGACTCACCCGCGGGTTACCGCCCCATTGTGTTGCTGGACGAGGCGGGAAAATTGTTGGAGCGAGTCGTCGCCGCCCGCATCGTCCGGCACCTGACTGGGACGGGTCCCGATCTATCGGCGGAGCAGTACGGCTTCAGAGAGGGCAGCTCTACCATCGACGCGATTATGCGCGTGCGTGCCCTCTCTGATGAAGCTGTCGCCCGGGGTGGGGTGGCTCTGGCAGTGTCCCTGGACATTGCCAATGCTTTCAACACCTTACCCTGGTCAGTGATCGCGGGGGCGCTTGAATATCACTGCGTCCCTGCGTACCTCCGCCGGCTGATCGGATCCTATCTTGAGGACAGGTCGGTCGTATGCACCGGACACGGGGGTGCGGTGCTCCGCTTTCCGGTCGAGCGCGGTGTTCCACAGGGGTCGGTCCTTGGCCCTCTTCTGTGGAATATCGGCTACGACTGGGTCCTGCGGGGTGCCCTTCACAGCCCTCTCCCGGGCCTACGCGTTGTGTGTTACGCGGATGACACGTTAGTCATGGCTCGGGGGAAAGACTACCATGAGTCTGCCCGTCTTGCCTGCGCAGGGGTGGCATTCGTCGTCGGTAATATTCGGAGGTTGGGCCTCGAGGTGGCGCTCGAAAAATCCCAGGCCCTGCTGTTTCACAGGGCTGGAAGAGAGCCGCCGCCCGGGGCCCACCTGGTGATTGGAGGCGTCCGCGTCGAGGTTGGGGTAACCGGGTTGCGGTACCTCGGCCTCGAATTGGACGGTCGTTGGAACTTCCGCGCTCACTTCGAGAAGTTAGGCCCTCGGCTGATGGCGACGGCTGGCTCGTTGAGCCGGCTCTTGCCAAACGTTGGGGGGCCCGACGCAGTAGTACGTCGTCTCTACGTGGGGGTGGTGCGGTCCATGGCACTATATGGGGCCCCCGTGTGGTGCCACGCCCTGACTCGCAGGAACATCGCGGCCCTGCGACGCCCGCAGCGTGCAATCGCGGTCAGGGCGATCCGTGGATACCGCACCGTCTCCTTCGAGGCGGCGTGCGTTCTCGCCGGGACGCCTCCCTGGGACCTGGAGGCGGAGGCGCTCGCCGCCGATTATGCGTGGCGATGTGACCTTCGCGACAGGGGGGAACCACGTCCCGGAGAAGGAGCGATTAGAGCGCGGAGGCTCCAATCTCGGCGGTCTGTGCTGGAGGCGTGGTCTCGCCGCTTGGCGAACCCGTCGGCCAGTCTCCGGACTGTCGAGGCGGTGCGCCCGGTCCTTGCGGAATGGGCGAACCGTGACCAAGGGCGTCTCACCTTCCGGTTGACGCAGATGCTTACCGGCCATGGGTGTTTTGGCCGGTACCTGCATCGCATCGCCCGGAGGGAACCGACGATGGAGTGTCACCACTGTGACTGCGACGAGGACACGGTCGAGCATACGCTCGCATATTGCCCCGCATGGCTGGAGCAACGCCGTGTCCTTGTCTCGCAAATAGGACCGGACTTATCGCTGCCGACCGTCGTGGCCACGATGCTCGGCAGCGATGAGTCCTGGAAGGCGATGCTCGACTTCTGCGAGTACACCATCTCGCAGAAGGAGGCGGCGGAACGAGAGAGGGAGAGCTCATCCCTCTCCGCACCTATCCGTCGCCGCCGAGCCGGGGGCCGGAGAAGGGCCTTTGCCCGACTCCGGCCCCTGTAG

Protein

MDVAWTEVVKRGNKNKKRVPAAARPQPAPAAAASHQEGRAAAQGKNKRRRNGKPRAPRSAAVVLELLPAAKEKGITYMEVMSRARGAVDVDAIGVEGGLKVRHTANGARLLECPGAQSGAAADRLVARLREILPDPEIVRIERPVKMAEVKLTGLDECATQDEVAAAIASQGNCALAHVKVGELRSTYSGARTAWARCPVQAAILLATSKWEACQHAWKAARRLDHGSGATTGGKTLAMPPALRYWSGHKAATCTAVPHCVLCDAAKRQADHRAGGPACRSAPSSTKRRRGGKNKRKKGAEEVPAANGVAGELVPAAAVEPEGGTGEGATDANLNHSARAQDLLVHTMAEWSIDVAVAAEPYFVPADQDSWIGDIDGSVAIIIRQAAALPPLVMVARGSGYVAARVDETVVIGVYFSPNRHLAEFERFLGGFEALVNRLGSRPVILAGDLNAKWVAWGSPRPNSRGRMLSEWAIAAGLCLLNRGSVATCVRWNGESHVDVTFASPSIARRTRGWRVLEGAETLSDHRYVRFELSASSRSASAMVARGEEELPRSTPRSFPRWALKRLNKELLVEAAAVAAWAPVPASPVDVESEADWFRGTMCRTCDAAMPRVGGHAPRGGAYWWSPNIAQLRHADAPGDARSGSLGAPIQNCPQEIAAVGSPMTERLQPRQLREIVSALFPQGEGTFRPPFMGTPPHHDGGDAPADVPSPKISGAEIRAAVSKMRRKDAAPGPDGIHGRVWDLVFGALGDRLVRLFEACLESGRFPTQWKTGKLVLLRKEGRPADSPAGYRPIVLLDEAGKLLERVVAARIVRHLTGTGPDLSAEQYGFREGSSTIDAIMRVRALSDEAVARGGVALAVSLDIANAFNTLPWSVIAGALEYHCVPAYLRRLIGSYLEDRSVVCTGHGGAVLRFPVERGVPQGSVLGPLLWNIGYDWVLRGALHSPLPGLRVVCYADDTLVMARGKDYHESARLACAGVAFVVGNIRRLGLEVALEKSQALLFHRAGREPPPGAHLVIGGVRVEVGVTGLRYLGLELDGRWNFRAHFEKLGPRLMATAGSLSRLLPNVGGPDAVVRRLYVGVVRSMALYGAPVWCHALTRRNIAALRRPQRAIAVRAIRGYRTVSFEAACVLAGTPPWDLEAEALAADYAWRCDLRDRGEPRPGEGAIRARRLQSRRSVLEAWSRRLANPSASLRTVEAVRPVLAEWANRDQGRLTFRLTQMLTGHGCFGRYLHRIARREPTMECHHCDCDEDTVEHTLAYCPAWLEQRRVLVSQIGPDLSLPTVVATMLGSDESWKAMLDFCEYTISQKEAAERERESSSLSAPIRRRRAGGRRRAFARLRPL

Uniprot

Q8MY33   Q8MY31   Q8MY35   Q8MY27   O01419   A0A2W1C3J5   + More
A0A0J7KQK3   A0A3S2LNH8   A0A0J7KJG6   A0A0J7N0R3   A0A0J7KIY5   A0A0J7KJH4   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7KIM6   A0A0J7K3F1   A0A0J7KYD2   A0A0J7KRB8   A0A0J7MY17   A0A0J7KF91   A0A0J7KF40   A0A0J7MWN5   A0A2S2PEZ7   T1DCM0   T1DG89   T1DG59   J9JWJ3   J9KJG8   X1WJY4   A0A2M4BBV9   A0A2S2NQQ6   A0A2M4ADW9   Q868S4   A0A2M4BC01   A0A2H8TR36   A0A2M4BC28   A0A2M4CS98   J9KT61   J9LVU7   F7IYU8   A0A2S2PRL8   A0A2H8TIE5   X1WZ64   A0A139W940   A0A139W9B3   A0A2S2P7D1   A0A142LX45   A0A139W939   F7IYV5   A0A2M4BC18   A0A2M4BC24   J9KM84   A0A034WR48   W8ADE4   W8ANK7   J9LA43   A0A2M4CJ33   A0A2M4CSA9   A0A2M4BDI3   F7IYV7   A0A142LX43   J9LQQ1   A0A2M4BCE1   A0A2M4CSI6  

Pubmed

12644555    9092665    28756777    24330624    18362917    19820115    + More
25527032    25348373    24495485   

EMBL

AB078930    BAC06454.1    AB078931    BAC06456.1    AB078929    BAC06452.1    + More
AB078935    BAC06462.1    D85594    BAA19776.1    KZ149896    PZC78733.1    LBMM01004272    KMQ92618.1    RSAL01003504    RVE40273.1    LBMM01006671    KMQ90407.1    LBMM01012412    KMQ86235.1    LBMM01006954    KMQ90166.1    LBMM01006657    KMQ90417.1    LBMM01008278    KMQ89009.1    LBMM01005474    KMQ91485.1    LBMM01007036    KMQ90099.1    LBMM01015025    KMQ84953.1    LBMM01002052    KMQ95336.1    LBMM01003988    KMQ92922.1    LBMM01014122    KMQ85315.1    LBMM01008445    KMQ88871.1    LBMM01008422    KMQ88894.1    LBMM01015285    KMQ84870.1    GGMR01015159    MBY27778.1    GALA01001777    JAA93075.1    GALA01001776    JAA93076.1    GALA01000302    JAA94550.1    ABLF02013358    ABLF02013361    ABLF02054869    ABLF02041886    ABLF02011238    GGFJ01001369    MBW50510.1    GGMR01006838    MBY19457.1    GGFK01005660    MBW38981.1    AB090815    BAC57906.1    GGFJ01001370    MBW50511.1    GFXV01003903    MBW15708.1    GGFJ01001439    MBW50580.1    GGFL01004044    MBW68222.1    ABLF02009073    ABLF02030702    ABLF02042963    ABLF02034925    AB593321    BAK38639.1    GGMR01019493    MBY32112.1    GFXV01002090    MBW13895.1    ABLF02011183    ABLF02041884    KQ972691    KXZ75806.1    KQ972544    KXZ75869.1    GGMR01012748    MBY25367.1    KU543683    AMS38371.1    KXZ75807.1    AB593325    BAK38646.1    GGFJ01001453    MBW50594.1    GGFJ01001454    MBW50595.1    ABLF02018942    ABLF02041885    GAKP01002292    JAC56660.1    GAMC01020519    GAMC01020515    JAB86040.1    GAMC01020517    JAB86038.1    ABLF02018098    GGFL01001192    MBW65370.1    GGFL01004046    MBW68224.1    GGFJ01001727    MBW50868.1    AB593327    BAK38648.1    KU543682    AMS38369.1    ABLF02030663    ABLF02041312    GGFJ01001541    MBW50682.1    GGFL01004047    MBW68225.1   

Proteomes

UP000036403    UP000283053    UP000007819    UP000007266   

PRIDE

O01419   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF03372   Exo_endo_phos
PF01553   Acyltransferase
PF01421   Reprolysin
PF00098   zf-CCHC
PF00075   RNase_H

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR024079   MetalloPept_cat_dom_sf       
IPR001590   Peptidase_M12B       
IPR000663   Natr_peptide       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

3.60.10.10     3.40.390.10     3.30.420.10    

ProteinModelPortal

Q8MY33   Q8MY31   Q8MY35   Q8MY27   O01419   A0A2W1C3J5   + More
A0A0J7KQK3   A0A3S2LNH8   A0A0J7KJG6   A0A0J7N0R3   A0A0J7KIY5   A0A0J7KJH4   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7KIM6   A0A0J7K3F1   A0A0J7KYD2   A0A0J7KRB8   A0A0J7MY17   A0A0J7KF91   A0A0J7KF40   A0A0J7MWN5   A0A2S2PEZ7   T1DCM0   T1DG89   T1DG59   J9JWJ3   J9KJG8   X1WJY4   A0A2M4BBV9   A0A2S2NQQ6   A0A2M4ADW9   Q868S4   A0A2M4BC01   A0A2H8TR36   A0A2M4BC28   A0A2M4CS98   J9KT61   J9LVU7   F7IYU8   A0A2S2PRL8   A0A2H8TIE5   X1WZ64   A0A139W940   A0A139W9B3   A0A2S2P7D1   A0A142LX45   A0A139W939   F7IYV5   A0A2M4BC18   A0A2M4BC24   J9KM84   A0A034WR48   W8ADE4   W8ANK7   J9LA43   A0A2M4CJ33   A0A2M4CSA9   A0A2M4BDI3   F7IYV7   A0A142LX43   J9LQQ1   A0A2M4BCE1   A0A2M4CSI6  

PDB

1WDU     E-value=3.63762e-09,     Score=152

KEGG

101743524    no KO assigned | (RefSeq) uncharacterized LOC101743524

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0005179   GO:0005576   GO:0004523  

Length:

1344

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05377

Exp number, first 60 AAs:

0.00043

Total prob of N-in:

0.00014

outside

1  -  1344

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

299.371709

CSRT

0

Interpretation

Uncertain