SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14121
Pre Gene Modal
BGIBMGA011194
Annotation
putative_prophage_CP4-6_integrase_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 2.013 Nuclear   Reliability : 1.864
 

Sequence

CDS
ATGTCTAAGGTAAAAAAGTACGTGCCGTCAACGCCTGAATTCGAAAAGACCATTGGAAGATACAAAGAGTTCGTTACCAACCTGGACGATCCTAATTCGGAGCCCATACGTGTTTTCGATCCTCTGTCGCAGAGTATGCTGGAAGAGCTCGCCCTCATCAGAGATGTCAGTAAATACTTGCAGAAGAAGAAGATTGAAGACGTGAATAAAGCTGCCCAAGCTGCTCAGCTAGAAGCAGAGGGAGCGAAGAAGAACGAAGAAGAAGCAGTGGAGCCCTCTGAAAAAAATGAAGATAAGAAAGACGAATAG
Protein
MSKVKKYVPSTPEFEKTIGRYKEFVTNLDDPNSEPIRVFDPLSQSMLEELALIRDVSKYLQKKKIEDVNKAAQAAQLEAEGAKKNEEEAVEPSEKNEDKKDE

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
102
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.45927
outside
1  -  102
 
 

Population Genetic Test Statistics

Pi
214.142952
Theta
133.694733
Tajima's D
3.000827
CLR
0.440356
CSRT
0.977151142442878
Interpretation
Uncertain
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