Gene

KWMTBOMO14115

Pre Gene Modal

BGIBMGA011197

Annotation

PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]

Location

Bomo_Chr23(-):18187105-18195832      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.078 PlasmaMembrane   Reliability : 1.166

CDS

ATGAAGACGAAATTGACGCCGGTGACATACCTCGGCAGCACCGTGATGGACCGGAGGTTTTCCAACGCCATGCTGCCGTGGCTGATAATGGAAATAAGAGCTACCAACGTACGAGATAAGGTCAGCATAGCCATCGACGGCGGTCATTTGAAAGTGTACAATGGAAACTTTGAGCCAGTTATAATACATAAGCTATCAGATATAATCAGGGCCAGCCAAGTGCCAGGACGTCCGGAGGAGCTGTTCTACATACTCCTTGATGAGAAGAAGGCACTGTTGAATTGCTACATGTTCAGAGCGGCTTCGGTGTACGAGGTGAGTGGTTAA

Protein

MKTKLTPVTYLGSTVMDRRFSNAMLPWLIMEIRATNVRDKVSIAIDGGHLKVYNGNFEPVIIHKLSDIIRASQVPGRPEELFYILLDEKKALLNCYMFRAASVYEVSG

Uniprot

H9JNU3   A0A2W1BB23   A0A2H1WTU6   A0A2A4JM98   A0A194PS53   A0A194RQA1   + More
A0A212ESH5   A0A0T6B824   A0A1Y1KBD9   A0A1Y1KDU9   A0A1Y1KIT0   A0A2J7QQZ2   B4G482   B3P2I6   A0A1B6MUY8   A0A0Q9WVF5   A0A0R3NHR6   I5AP38   A0A3B0K555   A0A1W4UJ81   A0A0Q9WXR1   A0A0Q9WYT3   A0A0N8P1P0   A0A1W4UWZ6   A0A0Q9WEX4   A0A0P9ASW7   A0A0Q9WGA2   A0A0B4KGK7   E1JJ52   A0A0R1E8U6   A0A0R1E4D3   A0A1B6I344   A0A0M4EGZ1   K7JI39   A0A232EPJ3   A0A1B6E1T2   A0A2B4RSD2   A0A3M6TFX9   A0A336MD89   A0A023F1P5   A0A1B0EYA1   A0A224X5L5   A0A069DZR8   A0A2S2P6Z8   A0A147BQH7   A0A131XVX9   J9JTC8   A0A087U1J2   A0A3S4QPG4   A0A0A9WHY8   A0A131YKA7   A0A2C9KKB9   L7M748   L7M959   A0A224Z9K0   W4XDX7   A0A131XHM0   A0A1E1X7Y9  

Pubmed

19121390    28756777    26354079    22118469    28004739    17994087    + More
15632085    23185243    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    20075255    28648823    30382153    25474469    26334808    29652888    25401762    26830274    15562597    25576852    28797301    28049606    28503490   

EMBL

BABH01009909    BABH01009910    BABH01009911    KZ150171    PZC72609.1    ODYU01011013    + More
SOQ56490.1    NWSH01001043    PCG72949.1    KQ459593    KPI96271.1    KQ459875    KPJ19667.1    AGBW02012824    OWR44391.1    LJIG01009247    KRT83462.1    GEZM01087434    JAV58694.1    GEZM01087430    JAV58698.1    GEZM01087431    JAV58697.1    NEVH01012082    PNF31000.1    CH479179    EDW25120.1    CH954181    EDV47936.1    GEBQ01009437    GEBQ01000268    JAT30540.1    JAT39709.1    CH964272    KRG00012.1    CM000070    KRT00538.1    EIM52723.1    KRT00537.1    OUUW01000007    SPP83140.1    CH933806    KRG00533.1    KRG00532.1    KRG00537.1    KRG00538.1    CH902617    KPU80460.1    CH940650    KRF83096.1    KPU80457.1    KPU80458.1    KPU80459.1    KPU80464.1    KPU80465.1    KRF83094.1    AE014297    AGB95680.1    BT133115    ACZ94810.1    AEY64283.1    CM000160    KRK03956.1    KRK03957.1    KRK03958.1    GECU01026367    JAS81339.1    CP012526    ALC45496.1    NNAY01002931    OXU20274.1    GEDC01005405    JAS31893.1    LSMT01000359    PFX19450.1    RCHS01003667    RMX40307.1    UFQT01000718    SSX26753.1    GBBI01003484    JAC15228.1    AJWK01017664    GFTR01008641    JAW07785.1    GBGD01000165    JAC88724.1    GGMR01012523    MBY25142.1    GEGO01002405    JAR92999.1    GEFM01004342    JAP71454.1    ABLF02028766    KK117713    KFM71231.1    NCKU01005017    NCKU01004346    NCKU01004345    NCKU01003802    RWS05116.1    RWS06081.1    RWS06085.1    RWS06896.1    GBHO01036583    JAG07021.1    GEDV01009180    JAP79377.1    GACK01005352    JAA59682.1    GACK01005351    JAA59683.1    GFPF01012248    MAA23394.1    AAGJ04021538    GEFH01002886    JAP65695.1    GFAC01004022    JAT95166.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000235965    + More
UP000008744    UP000008711    UP000007798    UP000001819    UP000268350    UP000192221    UP000009192    UP000007801    UP000008792    UP000000803    UP000002282    UP000092553    UP000002358    UP000215335    UP000225706    UP000275408    UP000092461    UP000007819    UP000054359    UP000285301    UP000076420    UP000007110   

PRIDE

H9JNU3    E1JJ52   

Pfam

PF11830   DUF3350        + More
PF00640   PID
PF00566   RabGAP-TBC
PF08416   PTB
PF01015   Ribosomal_S3Ae

Interpro

IPR011993   PH-like_dom_sf        + More
IPR000195   Rab-GTPase-TBC_dom       
IPR006020   PTB/PI_dom       
IPR035969   Rab-GTPase_TBC_sf       
IPR021785   DUF3350       
IPR013625   PTB       
IPR001593   Ribosomal_S3Ae       

SUPFAM

SSF47923   SSF47923       

Gene 3D

2.30.29.30    

ProteinModelPortal

H9JNU3   A0A2W1BB23   A0A2H1WTU6   A0A2A4JM98   A0A194PS53   A0A194RQA1   + More
A0A212ESH5   A0A0T6B824   A0A1Y1KBD9   A0A1Y1KDU9   A0A1Y1KIT0   A0A2J7QQZ2   B4G482   B3P2I6   A0A1B6MUY8   A0A0Q9WVF5   A0A0R3NHR6   I5AP38   A0A3B0K555   A0A1W4UJ81   A0A0Q9WXR1   A0A0Q9WYT3   A0A0N8P1P0   A0A1W4UWZ6   A0A0Q9WEX4   A0A0P9ASW7   A0A0Q9WGA2   A0A0B4KGK7   E1JJ52   A0A0R1E8U6   A0A0R1E4D3   A0A1B6I344   A0A0M4EGZ1   K7JI39   A0A232EPJ3   A0A1B6E1T2   A0A2B4RSD2   A0A3M6TFX9   A0A336MD89   A0A023F1P5   A0A1B0EYA1   A0A224X5L5   A0A069DZR8   A0A2S2P6Z8   A0A147BQH7   A0A131XVX9   J9JTC8   A0A087U1J2   A0A3S4QPG4   A0A0A9WHY8   A0A131YKA7   A0A2C9KKB9   L7M748   L7M959   A0A224Z9K0   W4XDX7   A0A131XHM0   A0A1E1X7Y9  

KEGG

101741500    K17902 TBC1 domain family member 4 | (RefSeq) uncharacterized LOC101741500

GO

GO:0005794   GO:0005178   GO:0017137   GO:0033627   GO:0009986   GO:0005096   GO:0043087   GO:0003735   GO:0005829   GO:0006412   GO:0005840  

Subcellular location

Cytoplasm  

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04068

Exp number, first 60 AAs:

0.03971

Total prob of N-in:

0.43353

outside

1  -  108

 

 

Pi

207.705401

Theta

151.835328

Tajima's D

0.627878

CLR

1.450657

CSRT

0.547972601369932

Interpretation

Uncertain