SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14114
Pre Gene Modal
BGIBMGA011198
Annotation
PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.12
 

Sequence

CDS
ATGAATCAGCACGGTTCATTTTTCGGTTCCCATTCGGACACATCGGCGATAAACATAAAGAATTTGGTAACTGATCTCTTCAGCCAGATGCGCGACCCGTCACCGGGCGCGCCCAGCCCTAAGGGCTCGACGGGATATCTGGCCAGCGGCGTGGTGACCAAGAACGTGGGCTTCCTTCAGCAGAACAATTCGGAGCACTTACCTTGGACCCCGCCTCTGGCGTTAACCGGAAACTGTAACAGTAATCTGACCGGTGAATCTCCCACGACTGTGAAGAGTACCAGTCACGTACCGGTCTTGGCTTCGCTCAGCGCTGATCTCTCGCCTTCAAACTCTCATTTCTTTGAGGTCTTGTATATCGGCAAAGTTCGGATATCGCAGAGGAAGGTACCAGAAACACTAATAGATGATGCTTTACACAAATTCGCTTTGCACGATGCGGAGAAAGCTCTGAGAAGGAGACACAGTCTGTTATCTTCAACCACGACCTCAATAGACAGTAATGATTCAACCGACAATCTGTCGGACGATAAGAAATCGCAAAAGACAAACGACTTAAGCAATAGGTTCGCTTCGCCGAGCACAACGCCCTTAGAGCCCCAGAAATCGCATAGATGGAGCAGCGTAGAAACTATAACGGAAAAACGAAAAGACTCGACACAAATCGAAGCAGAATTCGATCAGTTCACGAAAGAGAGAATCGAAATTGTAAAGAAGAGCGCCGATCTAGTTTTGAATCTACCGAAGAACAATCTTGGCACCGTAAAAGAAGACGAAGAGAAGATCGAAGTAGGCATTAGTAAAGAAGCAACAAGAGCTCCAGAAGACGGAGACGGTGAAACGAAAAGAGAAAGAAATTTCAATTTCGACGAGATTAAAAGGAAGCCGGCTTTCGGGAGTGAAGGCGCTAAGAGTCTGCCCGAGAATAGGCCGTTCTTAAGAGACAGATCGGCTTCGATAGGCACAATTAACAGTAAAACGCCTCTAGCGCAGTTGATCTGTGAACAGAATCGCACGATGCTATTTCAGGTCGGCCGTTCAGAATTGCGCCTTATAAGTCCGGACAGAAAGCAGATATTGCTGCACAGGGCGTTCAAGGACGTCGCCAGTTGCGTCTTAGGCCAGAACAATAAGGACCATTTCGGATTCGTTTGCAGAGAAACGAACGAAACGTACGCCTGCTATGTCTTCAAATGCGAGAGCGACTCGGTTGCTGGCGAAGTGGTGAACGCCATCCGACAAGCGTTTGTGGCACATGCGGACCTGTTGAAGAAATCCCGGGATAAGTCGCCGAACATGACTTGCGAGCATTGTCCAATGCTGTGGTACCACCGGCTGTGTCACGATATTGAGGGTATGACGGAGAAAAGAACCCACGCCTTTATACTGCGTAGGATAGAACAGTTACCTGAAGACGAACAGGATCTCATCATCACCAAGTACCAGGGTGGAACCAATTTGATCTATGAGACCAGCGAACACAATTCGTTCTTGATGATGCTCCTCCGAGCCCACTGCGAGGCCAAGCAGCAAAGGCACGTCCACGACACTGCCGAAAACAGATCTGAGTTCCTGAATCAATACCTTGGCGGCAGCACCATATTCATGAAGGCCAAGAGGTCTTTGTCGAGCGGCTTCGATCATCTCCTGAAGAGGAAGGCCAGCAGAGACGAAGGACTCGTTGCTCAAGTCAAAAAGGATACATCTCCGGCGCCCACCCCGCTCGCACAGACTCCGACCGACGCGCCGGACACGCCGACACAGGAGCACGGCAAGTCGCTCTCTCGCACCACGAGCCAGGATGACGAGAACCCCGTCCCGAAGACCAGTCTGCCGTCAGAGGAGAGGGGCGACTCGGAGGGGGCGAAGGGGGACGGGGATATCGTCACCTCCCCCATGATGGACATTTTCATGAAAGTAAGCGACTCCCGCGCCGCGGCCGCGGACGGAGCCCCCGGGCCGGACTCCACGTGGCGACAGGCGATCTACGAGAAGTCCATCACGCGAACCGACGCACAGGACGGTCAAGCCTCAACGTCATCAGGTGGCTCCAAGGAGAAACGCAAGCGGTCCCGTCAGGAGCTGAGGCGGCTCTGGGAGATGGCGATCGATCAGACAATACTGCTGGTTAGGATGGAGAAAGAGAACAAAAGATTAAAAGAGAGCGAGGAGTCGTCTGCCGTCCGTCGGATGAAGCTGGAGTACAGCGAGCTGGGCGCGTGCGAGCCCGGCGCCGCGCTCACGTGGGACCTGCTGCTGGGCGGGGGGCAGCGCGCCGCCGCCGCCGACAGACACATGCTCGCGCAGGCCGTCATGCAGGGCGTACCCCGAGTGTCTCGCGGCGCCATCTGGTACTTCCTGGCGGAGCAGGCCTGCCTCAGGGCTCCGCCCCCGGACACCAGACACTGCCCCTTCTACCACACTCCCTACACCACTCTACTGTCGGGTCTCACGAAACACCAGCACGCTATCTTAATTGACTTAGGTCGCACATTCCCCAAGCACTCGTATTTCGCATCAGCCCTCGGTCCCGGCCAGCTGGCTCTCTACAACATTCTGAAGGCGTACTCCTTGCTCGATCCTGATGTGGGCTACTGTCAGGGTCTGAGCTTTGTCGCCGGCGTGTTGCTGCTCCACATGGAGGAGGCGGAGGCGTTCGTTCTGCTGAGACATCTAATGTTCAGGAGAGGACTGAGACTGCAATACCTGCCCGACATGAGTGCACTCCAAGTACAGTTATACCAACTGTCTAGACTTCTAAAAGACCATGAACCAGAACTTCACGCGAAGTTAGAAGATCTGGACATCTCGCCAGCGCTGTACGCGGCACCGTGGATGTTGACGCTGTTCACGAGTCAGTTCCCGCTTGGGCTGGTCGTTAGGGTCTTTGATCTGATATTCCTGGACTCTCTAAACATAGTATTCGCTGTGTCTCTTTCTCTCCTCTCGGTTCATAAAGTCGGTTTGATGTTGTGTCAGAGTTGCGAAGAGGCCGCCGAGTATTTGAAACATAAATTACCGGACATAGACAAACCGATGTACGAGAAAGTAATGAAAAAGGTCCTCTCGATGGACATAAGCCGCGAGCTGAGCGAGTACGCCGTGGAGTACTCCGTGCTCCGAGAGGAGATGCCGCGGCTGGCGACCCTCACGCAGCAGAACCGGAAGCTCACGGAGGAGAACAGACGAATGAGCGAGCAGCTGGACTCAGCAATGGAGGCAATAGAAAACTATCAAAAGAGCCAAGCCCGTCTCGAAGCCGCCAACAAGAGCATCGAGCAACAACTGACGCTGCTGAGTCGGTACGTGAGCGCCCACCAGCGCGCCGACCTGCCCCAGGAAATCAAGAGGATCGTCCAGAGCCACAGCAAGAGGCTGTCCTTCGGCTCGAAGATGTTCTCGTCGAGGACCGCAGAGGAAGATGAGAGGAGAACTCACAAAGGCATCAGCACCCCGAATCTCTTTGCGAAGACGAACAAAGAAGACGTCGCCGAGAAATATTCGCCTGAAAACGACAGAAGAAGGTTCACAATGAAAAAATCCCTTTCAGTGCATTCTGGTCTCACGAAAAACCCTCTCAAAGCCTTAGATGAGAGAAGCGAGAATGAAAGGAACGGTAATGACGAAGGTCTATCGTGTGCGCTTAAAGAGTTGAATGGGAAGGTGTCTGGTGGTTTAGCGGCTCGCTCGGACCGACATCCGCAGCCAAGCTCGGAGCTGCCCAGCCAGGGGGAAACCAGAAGCGGCTCATACATCGACGACCTGCTATTGTTCCAGAGCAGAAAGTGCATGTCGTTGAATTTGAGTCCTAACATAGAGAAGTCCGGTAGCAAATCGATTGACAGCGGCTTCGCGACGCCCCTGAGCCCGGACCGGAACAGCGGGCCCGTGTCGCACCCGCTGAGCGATTGTGACGTTGAAATAAAATTCGACGGTCACTCGACCAAGCTGAAACAGATACGGCCCCTCCGACAGACGGACAAAAGTTAG
Protein
MNQHGSFFGSHSDTSAINIKNLVTDLFSQMRDPSPGAPSPKGSTGYLASGVVTKNVGFLQQNNSEHLPWTPPLALTGNCNSNLTGESPTTVKSTSHVPVLASLSADLSPSNSHFFEVLYIGKVRISQRKVPETLIDDALHKFALHDAEKALRRRHSLLSSTTTSIDSNDSTDNLSDDKKSQKTNDLSNRFASPSTTPLEPQKSHRWSSVETITEKRKDSTQIEAEFDQFTKERIEIVKKSADLVLNLPKNNLGTVKEDEEKIEVGISKEATRAPEDGDGETKRERNFNFDEIKRKPAFGSEGAKSLPENRPFLRDRSASIGTINSKTPLAQLICEQNRTMLFQVGRSELRLISPDRKQILLHRAFKDVASCVLGQNNKDHFGFVCRETNETYACYVFKCESDSVAGEVVNAIRQAFVAHADLLKKSRDKSPNMTCEHCPMLWYHRLCHDIEGMTEKRTHAFILRRIEQLPEDEQDLIITKYQGGTNLIYETSEHNSFLMMLLRAHCEAKQQRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLSSGFDHLLKRKASRDEGLVAQVKKDTSPAPTPLAQTPTDAPDTPTQEHGKSLSRTTSQDDENPVPKTSLPSEERGDSEGAKGDGDIVTSPMMDIFMKVSDSRAAAADGAPGPDSTWRQAIYEKSITRTDAQDGQASTSSGGSKEKRKRSRQELRRLWEMAIDQTILLVRMEKENKRLKESEESSAVRRMKLEYSELGACEPGAALTWDLLLGGGQRAAAADRHMLAQAVMQGVPRVSRGAIWYFLAEQACLRAPPPDTRHCPFYHTPYTTLLSGLTKHQHAILIDLGRTFPKHSYFASALGPGQLALYNILKAYSLLDPDVGYCQGLSFVAGVLLLHMEEAEAFVLLRHLMFRRGLRLQYLPDMSALQVQLYQLSRLLKDHEPELHAKLEDLDISPALYAAPWMLTLFTSQFPLGLVVRVFDLIFLDSLNIVFAVSLSLLSVHKVGLMLCQSCEEAAEYLKHKLPDIDKPMYEKVMKKVLSMDISRELSEYAVEYSVLREEMPRLATLTQQNRKLTEENRRMSEQLDSAMEAIENYQKSQARLEAANKSIEQQLTLLSRYVSAHQRADLPQEIKRIVQSHSKRLSFGSKMFSSRTAEEDERRTHKGISTPNLFAKTNKEDVAEKYSPENDRRRFTMKKSLSVHSGLTKNPLKALDERSENERNGNDEGLSCALKELNGKVSGGLAARSDRHPQPSSELPSQGETRSGSYIDDLLLFQSRKCMSLNLSPNIEKSGSKSIDSGFATPLSPDRNSGPVSHPLSDCDVEIKFDGHSTKLKQIRPLRQTDKS

Summary

Pfam
PF00640   PID        + More
PF11830   DUF3350
PF00566   RabGAP-TBC
Interpro
IPR000195   Rab-GTPase-TBC_dom        + More
IPR011993   PH-like_dom_sf       
IPR006020   PTB/PI_dom       
IPR035969   Rab-GTPase_TBC_sf       
IPR021785   DUF3350       
SUPFAM
SSF47923   SSF47923       
Gene 3D
PDB
3QYE     E-value=8.94055e-88,     Score=830

Ontologies

Topology

Length:
1329
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.81128
Exp number, first 60 AAs:
0.0002
Total prob of N-in:
0.00001
outside
1  -  1329
 
 

Population Genetic Test Statistics

Pi
300.390815
Theta
180.649665
Tajima's D
2.42587
CLR
0.453204
CSRT
0.937503124843758
Interpretation
Uncertain
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