SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14104
Annotation
AF461149_1_transposase_[Bombyx_mori]
Full name
Signal transducer and activator of transcription      
Location in the cell
Mitochondrial   Reliability : 1.759 Nuclear   Reliability : 1.661
 

Sequence

CDS
ATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACTCAAGATTGGTTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAG
Protein
MFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIRQPPILTWTSFVLR

Summary

Similarity
Belongs to the TGF-beta family.
Belongs to the transcription factor STAT family.
EMBL
AF461149    AAN06610.1    AB363028    BAG15927.1    AB473770    BAH20555.1    + More
RSAL01000200    RVE44486.1    AB363006    AB363010    AB363014    BAG15923.1    BAG15924.1    AB363018    BAG15926.1    RSAL01000063    RVE49524.1    RSAL01000012    RVE53510.1    RSAL01000021    RVE52408.1    RSAL01000114    RVE46946.1    RSAL01000022    RVE52367.1    RSAL01000131    RVE46422.1    RSAL01000140    RVE46091.1    RSAL01000209    RVE44259.1    RSAL01000387    RVE42024.1    RSAL01000174    RVE45058.1    RSAL01000004    RVE54604.1    RSAL01000931    RVE41042.1    RSAL01000300    RVE42771.1    RSAL01000470    RVE41612.1    U47917    AAB47739.1    JF779677    AEO90418.1    CAVP010058755    CDL95145.1    PDUG01000005    PIC23776.1    UZAH01031030    VDP13493.1    PDUG01000006    PIC20538.1    LNIX01000030    OXA41211.1    UYSL01020634    VDL75527.1    DS268433    EFO97645.1    UYSL01020631    VDL75518.1    UYSL01023059    VDL81638.1    KN729202    KIH62598.1    DS268747    EFP00909.1    JOJR01000015    RCN51257.1    DS268492    EFP11689.1    UYSL01009772    VDL68385.1    UYSL01022144    VDL79905.1    KI662043    ETN73029.1    PDUG01000001    PIC51673.1    DS268420    EFO87874.1    UYSL01002425    VDL65835.1    PDUG01000012    PIC13506.1    UZAH01000669    VDO19161.1    PIC29926.1    DS268508    EFO83264.1    DS268466    EFP06959.1    DS268679    EFO98285.1    DS268421    EFO88618.1    UZAH01001595    VDO19836.1    DS268428    EFO94379.1    DS268606    EFO93488.1    DS268673    EFO98001.1    EFP11674.1    DS268539    EFO88027.1    JOJR01000583    RCN36166.1    DS268545    EFO88382.1    JARK01001658    EYB84158.1    JARK01001601    EYB87313.1    PIC13553.1    UYSL01019770    VDL69590.1    JARK01001337    EYC34439.1    HE601413    CAS00486.1    UYSL01019810    VDL70150.1    DS268525    EFO85497.1    PIC28734.1    JARK01000255    EYC39473.1    JARK01001471    EYB97976.1    JARK01001350    EYC23962.1    JARK01001411    EYC06502.1    PIC31069.1    DS268612    EFO94085.1    UZAH01035625    VDP41785.1    JARK01000073    EYC44053.1    JARK01001345    EYC27589.1    UZAH01026445    VDO80847.1    PDUG01000004    PIC32571.1   
Pfam
PF00019   TGF_beta        + More
PF00431   CUB
PF01017   STAT_alpha
PF02864   STAT_bind
PF00017   SH2
PF02865   STAT_int
PF16095   COR
PF00069   Pkinase
PF00722   Glyco_hydro_16
PF07776   zf-AD
PF13358   DDE_3
PF00292   PAX
PF00001   7tm_1
Interpro
IPR009057   Homeobox-like_sf        + More
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR000859   CUB_dom       
IPR035914   Sperma_CUB_dom_sf       
IPR012345   STAT_TF_DNA-bd_N       
IPR008967   p53-like_TF_DNA-bd       
IPR013799   STAT_TF_prot_interaction       
IPR013800   STAT_TF_alpha       
IPR013801   STAT_TF_DNA-bd       
IPR000980   SH2       
IPR015988   STAT_TF_coiled-coil       
IPR001217   STAT       
IPR036535   STAT_N_sf       
IPR036860   SH2_dom_sf       
IPR032171   COR       
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR000757   GH16       
IPR013320   ConA-like_dom_sf       
IPR012934   Znf_AD       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR036906   ATPase_V1_fsu_sf       
SUPFAM
SSF46689   SSF46689        + More
SSF57501   SSF57501       
SSF49854   SSF49854       
SSF48092   SSF48092       
SSF47655   SSF47655       
SSF49417   SSF49417       
SSF55550   SSF55550       
SSF56112   SSF56112       
SSF52540   SSF52540       
SSF50998   SSF50998       
SSF49899   SSF49899       
PDB
5CR4     E-value=8.24544e-07,     Score=120

Ontologies

Topology

Subcellular location
Secreted  
Cytoplasm  
Nucleus  
Length:
91
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00031
Exp number, first 60 AAs:
0
Total prob of N-in:
0.36844
outside
1  -  91
 
 

Population Genetic Test Statistics

Pi
93.925541
Theta
69.546318
Tajima's D
0.963833
CLR
1.61287
CSRT
0.657517124143793
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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