Silkworm Genome Informatics Database

Gene

KWMTBOMO14103

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr23(-):17996758-17997892 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.844

CDS

ATGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAAGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAACTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGATCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGCACTGGGTATTCCAACAACATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCTTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGTCATTTTGAATAAACTTTAG

Protein

MNITKRFVYRTIKRYNEDSSVDDKSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRHWVFQQHSAPAHRAKSTQDWLAALEIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGVILNKL

Similarity

Belongs to the TGF-beta family.

Uniprot

A0A3S2LTJ6 A0A3S2LQG1 A0A3S2NQU1 A0A0N4Y9Q8 A0A0N4YHH1 E3M065 + More
A0A3P8BDC8 K7H3C7 A0A183F5L1 A0A3P7TF39 A0A3S2NJ26

EMBL

RSAL01000012 RVE53510.1 RSAL01000470 RVE41612.1 RSAL01000009 RVE53890.1 + More
UYSL01020934 VDL76658.1 UYSL01022144 VDL79905.1 DS268420 EFO87874.1 UZAH01025810 VDO70875.1 UZAH01001595 VDO19836.1 RSAL01000677 RVE41245.1

Proteomes

UP000283053 UP000038043 UP000271162 UP000008281 UP000005237 UP000050761 + More

Pfam

PF00019 TGF_beta + More
PF13358 DDE_3

Interpro

IPR001839   TGF-b_C        + More
IPR029034   Cystine-knot_cytokine
IPR017948   TGFb_CS
IPR015615   TGF-beta-rel
IPR009057   Homeobox-like_sf
IPR038717   Tc1-like_DDE_dom
IPR036388   WH-like_DNA-bd_sf

SUPFAM

SSF57501 SSF57501 + More
SSF46689 SSF46689

Gene 3D

2.10.90.10 1.10.10.10

ProteinModelPortal

A0A3S2LTJ6 A0A3S2LQG1 A0A3S2NQU1 A0A0N4Y9Q8 A0A0N4YHH1 E3M065 + More
A0A3P8BDC8 K7H3C7 A0A183F5L1 A0A3P7TF39 A0A3S2NJ26

PDB

5CR4 E-value=1.24205e-06, Score=122

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0005576 GO:0008083 GO:0003677 GO:0006508 GO:0016021 GO:0042626 GO:0016887 GO:0019829 GO:0005507 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR11848

Subcellular location

Secreted

Length:

215

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00052

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.30993

outside

1 - 215

Pi

176.278972

Theta

86.972313

Tajima's D

3.152706

CLR

0.748873

CSRT

0.984500774961252

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree