Gene

KWMTBOMO14094

Pre Gene Modal

BGIBMGA011213

Annotation

PREDICTED:_scavenger_receptor_class_B_member_1_[Bombyx_mori]

Location

Bomo_Chr23(-):17711124-17722337      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.144

CDS

ATGCTGGGATTTATAGCCCTCTCAATAGGATGCTTTATACTGTTCGTGAAGCCATACAACTTTCTGTTTAATCAGAAAGTCCTTCTGCAGGATGGGGGCGAAATCTTCGAGATGTGGAGGAAACCTGAAGTCCAGCTTTATACGAGGGTCTTTCTGTTCAACGTGACTAATTCTGAAGAGTACCTGGCTGGGAAGGATGAGAAAATTAAGCTCCAGGAAGTCGGGCCTTACGTGTACAGAGAGGCTTTGGAACACAAAGTTCAAAGCTTCAACTCGAACGGTACGTTGTCAGCGATTCCCCTGCATCCTCTGACTTGGGTGGAAGAGATGTCCGAGGGCCACAGAGAGGACGACATCGTATATATGCCGCACATAGCTCTACTGAGCATAGCAAACGTAGTCTCCCAGAATTTATTCGCGAGATTCGGCTTAAACAATCTGATTACGTTGACAAACAGCCAGCCCTTGACGAAAATGACGGCCAAAGAGTTCATGATGGGCTATAAGTCCGAGCTGATGACCCTGGGCAACACCTTCCTCCCGAGATGGATTTATTTCGACAAGCTCGGCCTGATCGATCGGATGTATGACTTCGATGGAGACTTCGAGACGGTCTACACAGGCGAAACTGATATCAGACTATCCGGCCTCATCGACACGTACCGCGGCTCCACCGACCTGCCGCAGTGGGAGGGGAAGCACTGCTCAAACGTGCAGTACGCGTCTGACGGCACCAAGTTCAGGGGTGGCGTCACCAAAAACGAAACCTTGCTGTTCTATAGGAAGAGTCTGTGCCGAGCTGCTCCTTTGATCCCTAGCGAGGAGGGCGTCAGAAGCGGCATAAGGGGCGTGAAGTACGTCTTCCCGGAGCACATGCTCGACAACGGCAAACATAACGAAGAGAACAAATGCTTCTGCAGGAATGGAAAATGCCTCCCAGAAGGACTGATCGACGTGGCGGACTGCTACTACGGTTTCCCGATAGCTCTGTCCTATCCCCACTTCTACAAAGGAGACGACGTCCTCTTCAGCAAAGTCGAAGGGCTGACGCCCAAAAAGGAGGAGCATGAGACCAGGCTTTAA

Protein

MLGFIALSIGCFILFVKPYNFLFNQKVLLQDGGEIFEMWRKPEVQLYTRVFLFNVTNSEEYLAGKDEKIKLQEVGPYVYREALEHKVQSFNSNGTLSAIPLHPLTWVEEMSEGHREDDIVYMPHIALLSIANVVSQNLFARFGLNNLITLTNSQPLTKMTAKEFMMGYKSELMTLGNTFLPRWIYFDKLGLIDRMYDFDGDFETVYTGETDIRLSGLIDTYRGSTDLPQWEGKHCSNVQYASDGTKFRGGVTKNETLLFYRKSLCRAAPLIPSEEGVRSGIRGVKYVFPEHMLDNGKHNEENKCFCRNGKCLPEGLIDVADCYYGFPIALSYPHFYKGDDVLFSKVEGLTPKKEEHETRL

Similarity

Belongs to the CD36 family.

Uniprot

A0A2A4K141   A0A3S2NFK2   A0A194RQ90   A0A194PSH0   A0A2H1WLC8   A0A1J1J3Z6   + More
A0A139WG73   A0A195FWI4   A0A195EDX3   A0A158NHD6   A0A1B6J672   A0A1B6M9G3   E2B9C5   A0A1B6LBY0   A0A154PEP6   A0A195AZH7   A0A1B6MVM3   A0A1B6IUH7   A0A088AKK6   F4X1X1   A0A2A3EJ06   A0A0L7QQ97   A0A151X8F9   A0A2J7PNU5   A0A0C9QRN9   A0A310SMC7   A0A195D4Q2   A0A0C9QR91   A0A1Y1KLH6   A0A1Y1KJ95   A0A067QYX6   A0A232EZ92   K7IRA8   A0A1Y1KDW8   A0A0M8ZY30   A0A1Y1KDR6   A0A026VWL9   A0A139WFW1   A0A336LYF7   A0A2S2Q087   A0A336L8K1   E0VPT8   A0A1L8DJF3   A0A3L8DH31   A0A182M5B4   A0A182IYY8   A0A1Q3G583   A0A1B6E1D3   A0A1L8DJY4   A0A1L8DJK2   A0A1L8DJL5   B4JQ31   W8APG5   A0A023EWJ5   N6TZF9   W8BDQ7   Q16QP3   A0A1D6T3G5   A0A182LE16   B4MUL6   A0A182XAB2   Q7QCP3   A0A0K8V9K3   A0A0K8W6B6   A0A0A1X9V9   A0A0Q9X4P3   A0A0R1E7T1   A0A182VLS1   A0A182HS57   A0A0M4ECD1   A0A1A9XQQ1   A0A2H8TYJ6   A0A0K8UG95   A0A0A1XA65   A0A2S2PRE0   A0A3B0KNZ1   B4KFF0   A0A0Q9W8H1   A0A182FQX2   W5JE70   A0A0R3NV07   A0A3B0KGS0   J9JX78   B4IT87   A0A0L0C5C4   N6T293   B4LQP2   A0A1A9ZFB7   A0A0J9R641   B4GXB0   B5DK45   A0A0J9R5H2   A0A1A9W5I5   Q8SYC3   A0A182U751   A0A1W4VA08   A0A1B0FR26   A0A0P9ABP3   A0A0A9ZCG5   A0A1I8N7C1  

Pubmed

26354079    18362917    19820115    21347285    20798317    21719571    + More
28004739    24845553    28648823    20075255    24508170    20566863    30249741    17994087    24495485    24945155    23537049    17510324    20966253    12364791    25830018    17550304    20920257    23761445    15632085    26108605    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25401762    26823975    25315136   

EMBL

NWSH01000254    PCG77991.1    RSAL01000135    RVE46258.1    KQ459875    KPJ19657.1    + More
KQ459593    KPI96257.1    ODYU01009439    SOQ53869.1    CVRI01000067    CRL06508.1    KQ971348    KYB26889.1    KQ981208    KYN44808.1    KQ979039    KYN23425.1    ADTU01015617    ADTU01015618    ADTU01015619    ADTU01015620    GECU01013046    JAS94660.1    GEBQ01007404    JAT32573.1    GL446493    EFN87706.1    GEBQ01018790    JAT21187.1    KQ434889    KZC10319.1    KQ976694    KYM77643.1    GEBQ01000026    JAT39951.1    GECU01017125    JAS90581.1    GL888555    EGI59558.1    KZ288248    PBC31169.1    KQ414792    KOC60729.1    KQ982409    KYQ56653.1    NEVH01023284    PNF18020.1    GBYB01006384    JAG76151.1    KQ762196    OAD56141.1    KQ976870    KYN07821.1    GBYB01006229    JAG75996.1    GEZM01086191    JAV59687.1    GEZM01086192    JAV59685.1    KK853094    KDR11500.1    NNAY01001554    OXU23617.1    GEZM01086194    JAV59682.1    KQ435827    KOX71919.1    GEZM01086193    JAV59683.1    KK107672    EZA48178.1    KYB26888.1    UFQT01000186    SSX21297.1    GGMS01001943    MBY71146.1    UFQS01002145    UFQT01002145    SSX13321.1    SSX32757.1    DS235379    EEB15394.1    GFDF01007594    JAV06490.1    QOIP01000008    RLU19750.1    AXCM01006435    AXCP01007876    GFDL01000116    JAV34929.1    GEDC01005560    JAS31738.1    GFDF01007424    JAV06660.1    GFDF01007425    JAV06659.1    GFDF01007426    JAV06658.1    CH916372    EDV99011.1    GAMC01018638    GAMC01018637    JAB87917.1    GAPW01000709    JAC12889.1    APGK01055245    KB741261    KB632413    ENN71632.1    ERL95261.1    GAMC01018636    GAMC01018635    JAB87919.1    CH477739    EAT36719.1    APCN01000243    CH963857    EDW76211.2    AAAB01008859    EAA07765.4    GDHF01016841    JAI35473.1    GDHF01005643    JAI46671.1    GBXI01013686    GBXI01006844    JAD00606.1    JAD07448.1    CH933807    KRG03056.1    CH891662    KRK05097.1    CP012523    ALC40414.1    GFXV01007521    MBW19326.1    GDHF01026617    JAI25697.1    GBXI01006724    JAD07568.1    GGMR01019364    MBY31983.1    OUUW01000010    SPP85558.1    EDW12050.1    CH940649    KRF81112.1    ADMH02001643    ETN61638.1    CH379061    KRT04955.1    SPP85559.1    ABLF02026897    ABLF02026902    EDW99477.1    JRES01000973    KNC26639.1    ENN71633.1    ERL95262.1    EDW63426.1    CM002910    KMY91451.1    CH479195    EDW27221.1    EDY70671.1    KMY91452.1    AY071642    AE014134    AAL49264.1    EAA46015.1    CCAG010000954    CH902638    KPU75614.1    GBHO01040299    GBHO01037707    GBHO01002028    GBHO01002023    GDHC01001230    JAG03305.1    JAG05897.1    JAG41576.1    JAG41581.1    JAQ17399.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000053268    UP000183832    UP000007266    + More
UP000078541    UP000078492    UP000005205    UP000008237    UP000076502    UP000078540    UP000005203    UP000007755    UP000242457    UP000053825    UP000075809    UP000235965    UP000078542    UP000027135    UP000215335    UP000002358    UP000053105    UP000053097    UP000009046    UP000279307    UP000075883    UP000075880    UP000001070    UP000019118    UP000030742    UP000008820    UP000075840    UP000075882    UP000007798    UP000076407    UP000007062    UP000009192    UP000002282    UP000075903    UP000092553    UP000092443    UP000268350    UP000008792    UP000069272    UP000000673    UP000001819    UP000007819    UP000037069    UP000092445    UP000008744    UP000091820    UP000000803    UP000075902    UP000192221    UP000092444    UP000007801    UP000095301   

PRIDE

Q8SYC3   

Pfam

PF01130   CD36        + More
PF04843   Herpes_teg_N
PF00069   Pkinase

Interpro

IPR002159   CD36_fam        + More
IPR005428   CD36/SCARB1/SNMP1       
IPR006928   Herpes_teg_USP       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       

SUPFAM

SSF56112   SSF56112       

ProteinModelPortal

A0A2A4K141   A0A3S2NFK2   A0A194RQ90   A0A194PSH0   A0A2H1WLC8   A0A1J1J3Z6   + More
A0A139WG73   A0A195FWI4   A0A195EDX3   A0A158NHD6   A0A1B6J672   A0A1B6M9G3   E2B9C5   A0A1B6LBY0   A0A154PEP6   A0A195AZH7   A0A1B6MVM3   A0A1B6IUH7   A0A088AKK6   F4X1X1   A0A2A3EJ06   A0A0L7QQ97   A0A151X8F9   A0A2J7PNU5   A0A0C9QRN9   A0A310SMC7   A0A195D4Q2   A0A0C9QR91   A0A1Y1KLH6   A0A1Y1KJ95   A0A067QYX6   A0A232EZ92   K7IRA8   A0A1Y1KDW8   A0A0M8ZY30   A0A1Y1KDR6   A0A026VWL9   A0A139WFW1   A0A336LYF7   A0A2S2Q087   A0A336L8K1   E0VPT8   A0A1L8DJF3   A0A3L8DH31   A0A182M5B4   A0A182IYY8   A0A1Q3G583   A0A1B6E1D3   A0A1L8DJY4   A0A1L8DJK2   A0A1L8DJL5   B4JQ31   W8APG5   A0A023EWJ5   N6TZF9   W8BDQ7   Q16QP3   A0A1D6T3G5   A0A182LE16   B4MUL6   A0A182XAB2   Q7QCP3   A0A0K8V9K3   A0A0K8W6B6   A0A0A1X9V9   A0A0Q9X4P3   A0A0R1E7T1   A0A182VLS1   A0A182HS57   A0A0M4ECD1   A0A1A9XQQ1   A0A2H8TYJ6   A0A0K8UG95   A0A0A1XA65   A0A2S2PRE0   A0A3B0KNZ1   B4KFF0   A0A0Q9W8H1   A0A182FQX2   W5JE70   A0A0R3NV07   A0A3B0KGS0   J9JX78   B4IT87   A0A0L0C5C4   N6T293   B4LQP2   A0A1A9ZFB7   A0A0J9R641   B4GXB0   B5DK45   A0A0J9R5H2   A0A1A9W5I5   Q8SYC3   A0A182U751   A0A1W4VA08   A0A1B0FR26   A0A0P9ABP3   A0A0A9ZCG5   A0A1I8N7C1  

PDB

5UPH     E-value=9.00538e-41,     Score=419

KEGG

101740110    no KO assigned | (RefSeq) scavenger receptor class B member 1

GO

GO:0016021   GO:0004672   GO:0005524   GO:0016020   GO:0007165   GO:0042626   GO:0016887   GO:0019829   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR11923  

Length:

360

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.52977

Exp number, first 60 AAs:

7.20203

Total prob of N-in:

0.24346

outside

1  -  360

 

 

Pi

185.236722

Theta

158.863567

Tajima's D

0.509387

CLR

1.180677

CSRT

0.511124443777811

Interpretation

Uncertain