Gene

KWMTBOMO14084

Annotation

hypothetical_protein_KGM_16874_[Danaus_plexippus]

Location

Bomo_Chr23(+):17608358-17611012      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.649

CDS

ATGGCTTTAAAATCTTACTCTCTTCATCAAGCACCGGTCCGCTTAGAGTTACGTGAGCAGCTCTCGAGCGCAATACAGTACGCTTCGTATTCTCTGCTCAGAGATTTGGAGAAGAATCTTAAGTTTCATTCGATCAAGCTGGCGACTTACGAGAGGGAATTCAAGGGTCTCCGTCTGAACCTGTGGGTCGCGGTCAGGATGCCGACCAGGAAACCTAAGCCCTTGGAGCCGGATCCAGAGCCAGTCGAGCTATCCTTTCCGTCTATGAGCGTCGCTGTGAAGCTGCCCAAGGTCATAGACGGGTCGTGCGTGTGTGTGCGCGCCGCCAGATCCTTGATTGACTTGCTCAGCGAGAGCACTAGGTCCTACGGGCTTGCTGCGGAGATGCCCAATAGATACGAAGATTTATTCGTGTTCAATGTTAAAGAACACGTGGAGACGTACAAACTGAAGAAGGAGCAGGACGATATAAGGAACAAATTCTACAAAGAAATACAACAGAAGATACGCGAAGTGGAGAACTTCTTGAAGGCTAATCCGTAA

Protein

MALKSYSLHQAPVRLELREQLSSAIQYASYSLLRDLEKNLKFHSIKLATYEREFKGLRLNLWVAVRMPTRKPKPLEPDPEPVELSFPSMSVAVKLPKVIDGSCVCVRAARSLIDLLSESTRSYGLAAEMPNRYEDLFVFNVKEHVETYKLKKEQDDIRNKFYKEIQQKIREVENFLKANP

Uniprot

A0A3S2NHW1   A0A2A4K144   A0A2H1WCN8   A0A2W1B2P0   H9JPC9   A0A194RQI6   + More
A0A151X423   A0A3L8DLP9   A0A232EXY6   K7JHF4   A0A026WMY6   E2BYG3   E9IZ51   E1ZWH8   E0W1V6   A0A1B6JCL1   A0A1B6E5H5   A0A1B6MD70   A0A1B6FPG4   A0A088AUB4   A0A2A3E318   A0A154PM40   A0A0N0BHK3   A0A1Y1KDS9   A0A3Q0J5E3   A0A1Y1KJW3   U4UKV0   A0A0L7RB19  

Pubmed

28756777    19121390    26354079    30249741    28648823    20075255    + More
24508170    20798317    21282665    20566863    28004739    23537049   

EMBL

RSAL01002551    RVE40460.1    NWSH01000254    PCG77995.1    ODYU01007785    SOQ50845.1    + More
KZ150562    PZC70528.1    BABH01009837    BABH01009838    KQ459875    KPJ19659.1    KQ982562    KYQ54968.1    QOIP01000007    RLU20839.1    NNAY01001677    OXU23252.1    KK107152    EZA57011.1    GL451478    EFN79247.1    GL767097    EFZ14149.1    GL434853    EFN74415.1    DS235873    EEB19550.1    GECU01010764    JAS96942.1    GEDC01004108    JAS33190.1    GEBQ01006148    JAT33829.1    GECZ01017673    JAS52096.1    KZ288460    PBC25491.1    KQ434977    KZC12929.1    KQ435752    KOX76198.1    GEZM01086185    JAV59693.1    GEZM01086183    JAV59696.1    KB632257    ERL90796.1    KQ414617    KOC68038.1   

Proteomes

UP000283053    UP000218220    UP000005204    UP000053240    UP000075809    UP000279307    + More
UP000215335    UP000002358    UP000053097    UP000008237    UP000000311    UP000009046    UP000005203    UP000242457    UP000076502    UP000053105    UP000079169    UP000030742    UP000053825   

PRIDE

H9JPC9   

Pfam

PF15927   Casc1_N        + More
PF12366   Casc1

Interpro

IPR031826   Casc1_N        + More
IPR023247   Casc1       
IPR022110   Casc1_domain       

ProteinModelPortal

A0A3S2NHW1   A0A2A4K144   A0A2H1WCN8   A0A2W1B2P0   H9JPC9   A0A194RQI6   + More
A0A151X423   A0A3L8DLP9   A0A232EXY6   K7JHF4   A0A026WMY6   E2BYG3   E9IZ51   E1ZWH8   E0W1V6   A0A1B6JCL1   A0A1B6E5H5   A0A1B6MD70   A0A1B6FPG4   A0A088AUB4   A0A2A3E318   A0A154PM40   A0A0N0BHK3   A0A1Y1KDS9   A0A3Q0J5E3   A0A1Y1KJW3   U4UKV0   A0A0L7RB19  

KEGG

101739470    K17580 cancer susceptibility candidate protein 1 | (RefSeq) protein CASC1-like

GO

PANTHER

PTHR20929  

Length:

180

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00014

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.09303

outside

1  -  180

 

 

Pi

220.849646

Theta

151.085629

Tajima's D

0.718943

CLR

190.675399

CSRT

0.573921303934803

Interpretation

Uncertain