Silkworm Genome Informatics Database

Gene

KWMTBOMO14081

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr23(+):17545398-17546630 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.572

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGTGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAAATTTTTATATAACCAAAAGATTCGTTTATCGTACCTTCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGCACTGGGTATTCCAACAAGATTCGGCACCAGCTCATAGAGCAAAGAGCACACAAGACTGGCTGGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGTTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTAACATGGACCTCGTTCGTGCTGCGATAGACGACAGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPIQIFNILKNFYITKRFVYRTFKRYNEDSSVDDRSVRTPAVIKAVKARIQRNPKRTGYSNKIRHQLIEQRAHKTGWREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADINMDLVRAAIDDRPRRLKACIQNHGGHFE

Uniprot

Q8ITJ9 A0A3S2L804 B9A8E5 A0A3S2LHT9 A0A0N4Y9Q8 A0A0N4XI93 + More
A0A0N4YHH1 A0A1I7RIM5 A0A0N4X1V3 A0A1I7TCP6 A0A3P7YLE6 A0A0N4XA04

Pubmed

12653938 21909270

EMBL

AF461149 AAN06610.1 RSAL01000931 RVE41042.1 AB473770 BAH20555.1 + More
RSAL01000114 RVE46946.1 UYSL01020934 VDL76658.1 UYSL01002425 VDL65835.1 UYSL01022144 VDL79905.1 UZAF01020477 VDO70271.1 UZAF01023081 VDO88391.1

Proteomes

UP000283053 UP000038043 UP000271162 UP000095284 UP000038042 UP000268014 + More
UP000095282

PRIDE

Q8ITJ9

Pfam

PF07776   zf-AD        + More
PF00431   CUB
PF13358   DDE_3

Interpro

IPR009057   Homeobox-like_sf        + More
IPR012934   Znf_AD
IPR000859   CUB_dom
IPR035914   Sperma_CUB_dom_sf
IPR038717   Tc1-like_DDE_dom
IPR036388   WH-like_DNA-bd_sf

SUPFAM

SSF46689 SSF46689 + More
SSF49854 SSF49854

Gene 3D

2.60.120.290 1.10.10.10

CDD

cd00041 CUB

ProteinModelPortal

Q8ITJ9 A0A3S2L804 B9A8E5 A0A3S2LHT9 A0A0N4Y9Q8 A0A0N4XI93 + More
A0A0N4YHH1 A0A1I7RIM5 A0A0N4X1V3 A0A1I7TCP6 A0A3P7YLE6 A0A0N4XA04

PDB

5CR4 E-value=0.00724946, Score=88

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677 GO:0006810 GO:0016021 GO:0042626 GO:0016887 GO:0019829 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

180

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.10087

Exp number, first 60 AAs:

7.10087

Total prob of N-in:

0.26107

outside

1 - 180

Pi

138.307707

Theta

63.086891

Tajima's D

2.270833

CLR

0.277156

CSRT

0.919454027298635

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree