SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14079
Pre Gene Modal
BGIBMGA011219
Annotation
PREDICTED:_uncharacterized_protein_LOC106131008_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.094
 

Sequence

CDS
ATGGAATCTGTAACTGATCGGTTGAATAAGCTCCGAGAAGAACGCATCGCTAGGGAAAAGGCGCGAATCGAAAAGTTACGGGAATTAAACCTCAAGAAATATAACAAAAATGACACCCAACCCAAGAACTCTGTGTCAAATGGTAGTGTGGCCGGTAAGTCGATCAAAAATGAAACTGGATCAAATATAACCAAAAATAATGTCAATAGTAACTATAAAAACAATTTTCATGTTAATGGAGTAATTACAAAAAGGCCTCTCACAGCCCCAGAAGCTAGAAAATCTTTGATGCCTAAAAAAGATGATAATGGTAAATCAAACATTGCTAATGATCCTAAAATTGAAACAAAAATTGAGAAAAACTTTAAGAAACCAGATGTATCAAATAACAGAACTGGGAGCAAGATACCAATGATGGGTACATCAAAACTAGCTTGTCATCAAGTAACAAAGGATGAGAAAAAACTGAATGCTCCAAAAATTGAGGTAAAACATACAAGAAAAAGTTTGGCAGCACCAAAACTTAGTAACCCGAAACCAACTATGACAGCAACTAGGAAGACAATGATACCAAAGATGTCAGATACAAATACCCGGGAATCTGTCTTCGATAGGCTATACAAACCCAAAGTGATTGCAAACCATGATAATGACATCAACAAACTAAAAACTGATCCAAATTATTTGAAAAAGGTCATTAAAAGCTCAGGGTTGCTGCTTGAAAAATCTCATGCTGCCGTCAAGACCAAGCCACCAGTTCGCCGCTCTATATCTGCTGTACACTTCAAGAGAATAAGCAAAAATGAAATTGGCAATTGCATTCATAAGTGGGCTTCAATTGGTGATAAGTTAAATAATGTGCATTTAAAACACATTAACGAAGATGAAACAGTAAACGCTGACAAAGTTATATCAGCTATTAAGAGTGAAAGGAAGAAGGTTAAATTCATGACTCCGATACCTCAGAATTTCAATACGCCACGCCCGGAAGAACTACAAGCAAGATTAAAATCTTGGTTACAAAAACGTGGCAAATCATTAGACACTTACCATCATTTGCAATGTTTTGGGATCAATCATTTATCGAACAAAGACATTGTACCTTTAGCCTTTGAAGAATTACCACAATTTAACTATGAAGAGGAAAATAAAGAGAATATTGCTCTGAATTCTGACAGCGATGACGATTCGTATGTCGAAAACATGAATGAGAATAACAAACACGTCAAAGATACAGTGAATTGGCGGCGAGCTAGCTGCGTCAGTGAAAGCGTTGACTTCAATGAGAGTGCTGACAGTACGTTGACATCGACAGACGTTTTTAAAATTGATGAAATATTACTGGGAGCCTTGAATGACCTTACTGATTTACTGAAAGAGGGCTTCGATTGGGAGCAAAGTGCTCGTTGGCTCCGAGCTATAAGGGAGAGATTCCCTGACGCGTCCAACACGGCTGCTTACTGGGAGTGCAGGGCTGCTCTAGAAGAGAGACGAGGAGATTTGCCGGCTTCCGTACAGTGTTGGGAGGAGGCTATCGCTAAGGGAACTGAGCATTCAGTCGTCGAAGCGAATCTCGACCAGTTACTGGACAAGTTCATGCAGCTGAAGATCAGCCCGAACAGCGGTAAGCGGCGCTGCATCGATCCCAAAATGGTAGACGTCAAAAACGTCTTCAAAAGTACGATCATACGTTTCGCTGTTCAACAAGCTAAATTGCGCAGGTCCGAGGGCCCCAAGTACACGGTGACGCCGGTCCGCCGCAGCGGGCGTCTCAGCATCCGGACCCCCTTGGCTGAGTGCAGCAGCGTGCGGACTCTGGCGCCGGGCCACGCGTTCGTACCGAACCCTACCATATGTCAAACGCCCTAA
Protein
MESVTDRLNKLREERIAREKARIEKLRELNLKKYNKNDTQPKNSVSNGSVAGKSIKNETGSNITKNNVNSNYKNNFHVNGVITKRPLTAPEARKSLMPKKDDNGKSNIANDPKIETKIEKNFKKPDVSNNRTGSKIPMMGTSKLACHQVTKDEKKLNAPKIEVKHTRKSLAAPKLSNPKPTMTATRKTMIPKMSDTNTRESVFDRLYKPKVIANHDNDINKLKTDPNYLKKVIKSSGLLLEKSHAAVKTKPPVRRSISAVHFKRISKNEIGNCIHKWASIGDKLNNVHLKHINEDETVNADKVISAIKSERKKVKFMTPIPQNFNTPRPEELQARLKSWLQKRGKSLDTYHHLQCFGINHLSNKDIVPLAFEELPQFNYEEENKENIALNSDSDDDSYVENMNENNKHVKDTVNWRRASCVSESVDFNESADSTLTSTDVFKIDEILLGALNDLTDLLKEGFDWEQSARWLRAIRERFPDASNTAAYWECRAALEERRGDLPASVQCWEEAIAKGTEHSVVEANLDQLLDKFMQLKISPNSGKRRCIDPKMVDVKNVFKSTIIRFAVQQAKLRRSEGPKYTVTPVRRSGRLSIRTPLAECSSVRTLAPGHAFVPNPTICQTP

Summary

Interpro
IPR011990   TPR-like_helical_dom_sf        + More
IPR026165   CKAP2_fam       
SUPFAM
SSF48452   SSF48452       
Gene 3D

Ontologies

GO

Topology

Length:
622
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00121
outside
1  -  622
 
 

Population Genetic Test Statistics

Pi
185.96846
Theta
175.603566
Tajima's D
0.125442
CLR
0.367522
CSRT
0.40057997100145
Interpretation
Uncertain
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