SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14077
Pre Gene Modal
BGIBMGA011220
Annotation
PREDICTED:_probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.949
 

Sequence

CDS
ATGGATCCCGGGTACTTTGATATAGAAAGGAAACAGGATCCAAGGGAGAAGGCAAATTTTTTGTCGAAACTATGCTTCGGATACACTCTCCCGGTGTTCGTGAAAGGTCGTAAAGGTCAGCTCAGCATCTCGGATGTGTACAGATGCTTGCCTTACTTAAAGGCAACACCACGAGGCGATGCTCTCGGTGCGATGTGGACCCAAGAACTGAAGAAGAAAGAATCGGGAAGAAAACCGTCCCTTCTCGCGGCCATATTAAGAATATACGGATTAAAGTTTTTCATTGGAAATATTATATTCTCCCTCTTCGATACAGCTGCTAAGTTGTCGATACCGCTATGCCTGGAAGGTCTGATAAATTACTTCTCGCCGTCTCACGGCGGGGTCCCGTTCGAACACGCGTACCTATACGCAGCTGGTGTGGTCGGTTGCATGGTGGCGAGTGCTATGATGATGCATCCGTTCCTACTTTGGTTGCTGGACACGGCCGTCAAGATCAGAGTAGGATGCTGTTCGCTCTTATACAGAAAGTTGCTTCGTATAGATTTAACCGTCGGTGGCAAGGCTACGGAAGGGCTGGCCGGTCACGTGGTCAATCTCCTGACCACAGACGCCCAGCGCTTCGACATGGCCTCGTTATTCGCGATGGACCTGATCCGGACCCCGATAGATAGCACGATCATCATCTACCTGATGTACAGGCAGATCGGGGTGGCCACATTAATCGGGGTGGCTTTTCTGTTGCTCTTCATTCCACTGCAAGGTTACCTGGGTAAAATATCCAGTAATCTACGCAGGAAGGTGGCGGTGCGCACTGACCATCGCATCCGGCTGATGAATGAGGTAGTGCAAAGCATAGAGGCTATTAAGATGTATGCCTGGGAGAATGCCTTCGCTAGGATCATCGGAGATGCTAGAAAGAAAGAAATGAACGTGATAAAGAAGAAGTCGTGGCTCCGGGCGGTGATGATATCCTGCGTAAAGCTGAACACGAAGGTGGCGATATTCCTGAGCATAATATCGTACATCACCTTGGGCAATGAACTGACAGCGGCCAAAGTCTTCGTGATATTCTCTTATTACGACATCCTGAAGTACACTCTGGTGGATTTTTTGCCGCTCGCGATAACGTTCACGCTGGAGGCGTACGTCAGCGTTAAGAGGATACAGGAGTTCCTGCTCCTGCCCGAGGTGGATAATCAAGACGGAGTAGACCTGGTCACAATCGAAGAGAAAACTCAGGTTCAGAACGGAGTCTTCGAGAAGATCGGAAACGGTCAGCAAGCGTATGTGAAGTCGGAAGCGAACCTGGAAAACCTGAAACCTCAGGTCCTGGTGTCCATGAAAGATTTCAACGCGCACTGGAAAAACGCTGAGGACGAATCTATGGATGGAAAAGTGACCGCATTAGCTAATATTAATCTTACTATCAAACCAGAAACACTGACGACCATTGTGGGCACGGTAGGTGCTGGTAAATCGACGCTGCTCCAAGCGATCTTACGTGAAATAATACCGAGCAGTGGACATTTGGAGGTCAACGGTGTTGTCGCGTATGCCGCCCAGGACCCGTGGCTGTTCGAAGCGTCCGTCCGTCAGAACATACTCTTCGGTCAGGAGTTGGATCTAAGACGTTATAAGCAAGTTATACGATGCTGTCAGCTGAAGAGCGACTTGGAGATACTGCCGCACGGAGACAAGACTATAGTCGGGGAGAGGGGTGCATCATTGTCAGGCGGTCAGAGGGCCAGGATATCTCTGGCGAGGTGCGTGTACCAGAATGCGGACGTCTATCTCCTCGACGACCCGCTGGCGGCCGTCGATGCTAAAGTGGCGTCCGCCATGTACGAGGAGTGCGTCCGCGGCATGCTGCGCGACAAGGCGGTGCTGCTGGTCACCCACCACGTGCAGTACGCCAGGGGCGCCAGCAACGTGCTGCTCATGAGGAGCGGGAAGATAGTGGCGCAAGGCACGTATGAGGAGCTCAAAAGCTCAGTGCCTGAGTTCGAGAAGCTGATCGAAATGGGTGAGAAGGTCGAAGAGGAAAAGCTCAAGCAGAAAGCGGCGTCGTACGAGAACCAGGAGAGCATTGAACACAAACTGAAATCGCAACGTTCAATGTCTCAAGCGTCTCAAATGTCATTCAACATTGACCTAGACAACAATTTGGATCCCAAATATGAAGGCGAATCCCAAGGCACAGGGTCGGTGTCAAACAGCGTTTACATGGCCTACGTTAGGAGCGGGGGAAACAAATGGTCCATGACCCTCTTGATCGCTCTGTTTCTGGTTGCCCAAGTGTTCTATTCATCCACAGACGTTTGGCTGAAGGAGTGGGTCAATCTGGAAGAGAAGAACAGCGTCATAAACGTCACCAAGAACAACGATACCTTGTCTCCTGAGACGCTCTTCAAGAACATGCCGAGCAATTATTTCCATCTGACGCGCGAACAGTGTCTGTACATATACGGAGGCCTCATCGCTGTCTGCGTCTTCTTCACGTGGAACAAGCTCGTCGTCTTCTACAACACGTGCATCAGGGCTTCCATCAGCCTACACGACAACATGTTCAAGGGAGTGACGTACGCGCCGATGTGGTTTTTCCACCACAACCCTTCGGGCAGGATCCTGAACAGGTTCTCGAAGGACATGGGACAAGTGGACACGTTGCTGCCGCTCGCTCTGGTCGACTGTCTAGGGTTCTTCTTGGAAGTGCTGGCCATCCTGGTCGTGGTCTGCTTGGTCAACTGGTGGCTGATACTGCCCACCGCGGTGGTGGCGGCGCTGCTGTTCCTACTCCGGGCCATGTTCCTCGCCACCAGCAGGGACCTCAAGAGAATCGAGGCTATTGCCCGCAGCCAGTCCCTCAACCACGTGTCGTCGACGGTGCACGGGCTGCCCACCATCCGCTCCACGCGGCAGCACCAGCGCGCCCTGGTCGCCGAGTTCGACAAGCTCCAGGATCTGCACAGTGCCGCCTGGTCCCTGGTGCTCTCCACCAACCGAGCGTTCGGTCTCTGGATGGACATGGTCTGCTGCATGTACCTGGCTTTGGTCACGTTTAGTTTCTTTGTCTTCGCGAGTGGCGATACTATAGGGGGGAGCGTCGGCCTGGCCATAACGCAGGTCATAGGCTTGGTGGGGATGTGCCAGTACGGAATGAGGCAGACTGCCGAAGTCGAGAACCAGATGACGTCCGTGGAAAGGATATTGGAGTACACGAATCTGCCCCCGGAACATCCTCTGGAGACGGACGAGGCTGCCATCAGAAAGAACCATCCGGGTCTGGACCTCAGCAAGTGGCCCACTAAAGGCGAAATTTCCTTCGAGAACGTCTATTTGGAGTACGAGAAACCGCCTAAAGGGAAGAACGAGGCTCCAAGACCCGAGGCCCCGGTCTACGCGATCAAGGGAGTCAGCTTCAAGGTCCAGCCGGCGGAGAAGGTGGCTGTGGTCGGCAGGACAGGGGCGGGAAAGAGTTCGCTGCTCAACGCTTTATTTAGGTTGAGCCGCATCGCGGGCACGGTGTCGGTGGACCGCGTGACGGCCGAGCAGGTGGGGCTGCGCTGCTGGCGCTCGCGGCTCTGCGCCCTGCCGCAGCGCCCGGCGCTCTTCGCCGCCTCGCTCCGGGACAACCTCGACCCCACGCACTCCGCCACCGACGCGCAGATATACGCCGCGCTCGAACAGGTGGAATTGCTGGATCTGGTCTCCAGTCTACCCGCAGGCCTGAACACGAAGCTGGGAGACGGCGGAGGCTCCCTGTCGTCCGGTCAGCGGCAGCTGCTGTGCTTGGCGCGCGCCGCGCTGGCCGGCTCCAGCGTGCTGCTGCTGGACGAGGCCACCGCCAACGTGGACACCGAAACGGACAAGCAGATCCAACGGACGATAAGGACGAAGTTTTCAAACGCGACCGTGCTCACGATCGCTCACAGACTAAACACGGTCATGGACTACGACAGGGTCATTGTCATGGACAAGGGGCGCATAGTGGAATCTGGTCACCCCCACGAGCTCCTGACGCAGAGCGGCCCGGACCAGACCCGGAGGACGCTGCTGTCCAAGAACCAGGCGCCACTTGCCGTGCCGGAGGAATGCGAGGGCGCGGTGCACAGATCCAGGACCTACTCTGAGAAGTCCGCTGACTCCGAGCTGGAGGCGACGGGAGTTTTCAAGACCCTGGTCGAGCAGACGGGGAAGGAAACGGCAGCCATGCTGAGGAGAGCCGCAGCAGAGAGCTACAAGACGTGGTTGGAAAAGAAAAAATCTACTTAA
Protein
MDPGYFDIERKQDPREKANFLSKLCFGYTLPVFVKGRKGQLSISDVYRCLPYLKATPRGDALGAMWTQELKKKESGRKPSLLAAILRIYGLKFFIGNIIFSLFDTAAKLSIPLCLEGLINYFSPSHGGVPFEHAYLYAAGVVGCMVASAMMMHPFLLWLLDTAVKIRVGCCSLLYRKLLRIDLTVGGKATEGLAGHVVNLLTTDAQRFDMASLFAMDLIRTPIDSTIIIYLMYRQIGVATLIGVAFLLLFIPLQGYLGKISSNLRRKVAVRTDHRIRLMNEVVQSIEAIKMYAWENAFARIIGDARKKEMNVIKKKSWLRAVMISCVKLNTKVAIFLSIISYITLGNELTAAKVFVIFSYYDILKYTLVDFLPLAITFTLEAYVSVKRIQEFLLLPEVDNQDGVDLVTIEEKTQVQNGVFEKIGNGQQAYVKSEANLENLKPQVLVSMKDFNAHWKNAEDESMDGKVTALANINLTIKPETLTTIVGTVGAGKSTLLQAILREIIPSSGHLEVNGVVAYAAQDPWLFEASVRQNILFGQELDLRRYKQVIRCCQLKSDLEILPHGDKTIVGERGASLSGGQRARISLARCVYQNADVYLLDDPLAAVDAKVASAMYEECVRGMLRDKAVLLVTHHVQYARGASNVLLMRSGKIVAQGTYEELKSSVPEFEKLIEMGEKVEEEKLKQKAASYENQESIEHKLKSQRSMSQASQMSFNIDLDNNLDPKYEGESQGTGSVSNSVYMAYVRSGGNKWSMTLLIALFLVAQVFYSSTDVWLKEWVNLEEKNSVINVTKNNDTLSPETLFKNMPSNYFHLTREQCLYIYGGLIAVCVFFTWNKLVVFYNTCIRASISLHDNMFKGVTYAPMWFFHHNPSGRILNRFSKDMGQVDTLLPLALVDCLGFFLEVLAILVVVCLVNWWLILPTAVVAALLFLLRAMFLATSRDLKRIEAIARSQSLNHVSSTVHGLPTIRSTRQHQRALVAEFDKLQDLHSAAWSLVLSTNRAFGLWMDMVCCMYLALVTFSFFVFASGDTIGGSVGLAITQVIGLVGMCQYGMRQTAEVENQMTSVERILEYTNLPPEHPLETDEAAIRKNHPGLDLSKWPTKGEISFENVYLEYEKPPKGKNEAPRPEAPVYAIKGVSFKVQPAEKVAVVGRTGAGKSSLLNALFRLSRIAGTVSVDRVTAEQVGLRCWRSRLCALPQRPALFAASLRDNLDPTHSATDAQIYAALEQVELLDLVSSLPAGLNTKLGDGGGSLSSGQRQLLCLARAALAGSSVLLLDEATANVDTETDKQIQRTIRTKFSNATVLTIAHRLNTVMDYDRVIVMDKGRIVESGHPHELLTQSGPDQTRRTLLSKNQAPLAVPEECEGAVHRSRTYSEKSADSELEATGVFKTLVEQTGKETAAMLRRAAAESYKTWLEKKKST

Summary

EMBL
KZ150501    PZC70665.1    BABH01009825    BABH01009826    BABH01009827    BABH01009828    + More
KQ459593    KPI96277.1    KQ459875    KPJ19671.1    RSAL01000135    RVE46268.1    NWSH01003928    PCG65673.1    KPJ19664.1    KPI96267.1    AGBW02010272    OWR48836.1    CH477873    EAT35434.1    KA646208    AFP60837.1    GAMC01007938    JAB98617.1    JXUM01117580    KQ566098    KXJ70400.1    KK852521    KDR22129.1    CH379060    KRT03846.1    CH940649    EDW63702.2    KRF81256.1    KRF81257.1    KRF81258.1    EDY69930.1    CH479180    EDW28514.1    GDHF01002527    JAI49787.1    CH902620    EDV31158.2    CH954177    EDV59344.1    AE014134    BT133430    AAF52648.2    AFH03617.1    AFH68354.1    GL445398    EFN89664.1    CM002910    KMY89049.1    KMY89050.1    KMY89051.1    GECL01002731    JAP03393.1    GFDF01003929    JAV10155.1    GFDF01003930    JAV10154.1    CH916368    EDW02798.1    BT032858    ACD81872.1    CH480818    EDW52123.1    GAKP01021198    GAKP01021195    JAC37754.1    LJIG01022813    KRT78583.1    GBGD01000127    JAC88762.1    JRES01000405    KNC31637.1    GDKW01000545    JAI56050.1    NWSH01000076    PCG79892.1    AAZX01002657    CP012523    ALC40251.1    CM000157    EDW88499.1    QOIP01000007    RLU20304.1    KM453743    KP335688    AKC34058.1    AKC34900.1    GFDL01012672    JAV22373.1    KY484779    ASS36021.1    OUUW01000010    SPP86203.1    GBBI01002866    JAC15846.1    KNC31638.1    NEVH01026090    PNF14801.1    GBYB01005573    JAG75340.1    DS231979    EDS30176.1    GFDL01013712    JAV21333.1    GFDL01013703    JAV21342.1    EAT35435.1    CH963920    EDW78164.1    KZ288215    PBC32516.1    LBMM01006434    KMQ90611.1    KQ971342    KYB27685.1    GDHF01033209    GDHF01033045    GDHF01014300    GDHF01014169    GDHF01011970    GDHF01001646    JAI19105.1    JAI19269.1    JAI38014.1    JAI38145.1    JAI40344.1    JAI50668.1    CH477849    EAT35658.1    AAAB01008952    EAA10571.6    JXUM01117579    KXJ70399.1    GGFJ01000531    MBW49672.1    ABLF02027734    CP012526    ALC47338.1    KF828786    AIN44103.1    GGFJ01000532    MBW49673.1    GEZM01016941    GEZM01016940    GEZM01016938    JAV91034.1    GAKP01021193    GAKP01021192    JAC37760.1    APCN01005971    ATLV01021296    KE525316    KFB46275.1    DS232648    EDS44400.1    AXCN02001594    EFA03948.2    ADTU01019789    ADTU01019790    JRES01000264    KNC32832.1    KQ976450    KYM85726.1    GGMS01006995    MBY76198.1    EFA03011.2    UFQT01000742    SSX26867.1    GL888807    EGI58005.1    KQ977121    KYN05546.1    UFQT01000413    SSX24086.1    GEZM01016939    JAV91033.1    UFQT01000418    SSX24156.1   
Pfam
PF00664   ABC_membrane        + More
PF00005   ABC_tran
Interpro
IPR027417   P-loop_NTPase        + More
IPR011527   ABC1_TM_dom       
IPR036640   ABC1_TM_sf       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR003593   AAA+_ATPase       
IPR000788   RNR_lg_C       
SUPFAM
SSF90123   SSF90123        + More
SSF52540   SSF52540       
Gene 3D
PDB
6BHU     E-value=1.13623e-154,     Score=1407

Ontologies

Topology

Length:
1424
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
231.1304
Exp number, first 60 AAs:
0.12877
Total prob of N-in:
0.95567
inside
1  -  80
TMhelix
81  -  103
outside
104  -  134
TMhelix
135  -  157
inside
158  -  235
TMhelix
236  -  258
outside
259  -  819
TMhelix
820  -  842
inside
843  -  889
TMhelix
890  -  912
outside
913  -  915
TMhelix
916  -  938
inside
939  -  1002
TMhelix
1003  -  1025
outside
1026  -  1424
 
 

Population Genetic Test Statistics

Pi
206.796998
Theta
170.041759
Tajima's D
0.598646
CLR
0.600438
CSRT
0.545472726363682
Interpretation
Uncertain
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