Gene

KWMTBOMO14068

Annotation

PREDICTED:_lysosomal_alpha-mannosidase-like_[Papilio_xuthus]

Location

Bomo_Chr23(+):17251692-17252646      View in EpiBrowser

Full name

Alpha-mannosidase      

Location in the cell

Mitochondrial   Reliability : 1.662

CDS

ATGCGCTTCTTCCATATTGGAAAGCATTCATTCACCTTCTCCGAAACGTCGTATTTCTGGCGCTGGTGGAAAGAACAGCGTCCTGTAACGAGGTCCACCTTCCGTAGCCTCGTGCAGGAAGGTCGCGTGGAGTTCGCCGGAGGAGGCTGGGTCCAGAACGACGAAGCGACTTCCGATTATCTCCAGATCATTGACCAATATACTTGGGGATTGAGGAAACTGAACGACACTTTAGGCCTGTGTGGTAAGCCTAAAGCAGCTTGGCAGATTGACACATATGGCCACACCAGGGAACAGGCATCTTTACTGGCACAAATGGGCTTTGATGGCTTATTTATCGGTACATATCTCGGTTTTTATTTACTTATCGCTTAA

Protein

MRFFHIGKHSFTFSETSYFWRWWKEQRPVTRSTFRSLVQEGRVEFAGGGWVQNDEATSDYLQIIDQYTWGLRKLNDTLGLCGKPKAAWQIDTYGHTREQASLLAQMGFDGLFIGTYLGFYLLIA

Cofactor

Zn(2+)

Similarity

Belongs to the glycosyl hydrolase 38 family.

Feature

chain  Alpha-mannosidase

Uniprot

A0A2A4IWX3   A0A2A4IXJ1   A0A194PYQ5   A0A194RQK5   A0A2W1BMA0   A0A2H1VKW2   + More
E0VRZ4   A0A1Y1KHF4   Q178V9   A0A182GN05   U5EV98   A0A023EX89   A0A3G5BIG9   A0A0A1WJW5   A0A2P8Y360   A0A1L8DR39   A0A2A4JTC5   A0A146LUI9   A0A0A9VXB9   A0A034V372   A0A0A1WZV2   A0A1L8DQQ1   W8APD9   A0A0A1XEF2   A0A2A4JU30   A0A0P5C6A1   A0A2P8Y345   A0A0P5CFQ9   A0A1S4FBS2   D6WI18   A0A1B0CB94   A0A2A3EH85   B3MJI9   A0A3G5BIM3   A0A0P8XGR3   U4V0C3   A0A2P8Z1T1   A0A0P5C669   J9JL57   A0A2H8TPV8   A0A1J1I5Z3   A0A1J1I212   A0A0P5C6H0   Q178W1   A0A1Y1KKT1   A0A3B0JHP2   A0A3B0K7V8   A0A3B0JH41   N6TNX4   A0A0Q9XIT5   B4KHR0   B3N5F1   A0A087T0N6   A0A0Q5WN53   E9H264   A0A2H1VPQ4   U4TT01   A0A154P4N7   U4TTZ9   N6ULX5   A0A023EWA7   B4MUA9   A0A1B6CNQ5   A0A212F5R4   A0A0L7QJS0   A0A3Q0J7L7   A0A2M4BAP9   A0A182QEX5   A0A1B0GPJ0   A0A0R1DR73   A0A1B6CQR4   Q8IPB7   B4Q9B2   Q9VKV1   B4HWQ4   A0A0J9R086   A0A2I4CBX4   A0A2J7RN15   A0A2P8ZEB4   A0A182P6H2   A0A0M4ER29   A0A2J7RN33   A0A336LVA7   A0A1I8QD07   A0A336LYZ7   A0A1W3JCU7   A0A087ZZ79   A0A0K8WDF9   A0A182RK94   A0A1I8QCY1   Q178W0   A0A2L2Y690   A0A0K8UEK7   A0A1J1IUF7   A0A1A9W6T1   A0A0K8U3N4   A0A0K8VT60   A0A146VDZ7   A0A182NTB7   A0A0K8VTI9  

EC Number

3.2.1.-

Pubmed

26354079    28756777    20566863    28004739    17510324    26483478    + More
24945155    30400621    25830018    29403074    26823975    25401762    25348373    24495485    18362917    19820115    17994087    23537049    21292972    22118469    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    26109357    26109356    26561354   

EMBL

NWSH01006168    PCG63620.1    NWSH01004815    PCG64677.1    KQ459593    KPI96285.1    + More
KQ459875    KPJ19679.1    KZ150153    PZC72813.1    ODYU01002940    SOQ41072.1    DS235639    EEB16150.1    GEZM01085309    JAV60008.1    CH477358    EAT42740.1    JXUM01075505    KQ562889    KXJ74905.1    GANO01001972    JAB57899.1    GAPW01000077    JAC13521.1    MK075175    AYV99578.1    GBXI01014983    JAC99308.1    PYGN01000985    PSN38671.1    GFDF01005289    JAV08795.1    NWSH01000615    PCG75287.1    GDHC01008237    JAQ10392.1    GBHO01043763    GBHO01043759    JAF99840.1    JAF99844.1    GAKP01021246    JAC37706.1    GBXI01009935    JAD04357.1    GFDF01005288    JAV08796.1    GAMC01015917    GAMC01015916    GAMC01015915    GAMC01015914    JAB90640.1    GBXI01004996    JAD09296.1    PCG75286.1    GDIP01174920    JAJ48482.1    PSN38683.1    GDIP01174916    JAJ48486.1    KQ971332    EEZ99703.1    AJWK01004914    KZ288262    PBC30371.1    CH902620    EDV32357.1    MK075237    AYV99640.1    KPU73915.1    KI209786    ERL96095.1    PYGN01000238    PSN50451.1    GDIP01174918    JAJ48484.1    ABLF02026049    GFXV01004418    MBW16223.1    CVRI01000038    CRK93801.1    CRK93802.1    GDIP01174919    JAJ48483.1    EAT42738.1    GEZM01085310    JAV60006.1    OUUW01000006    SPP81715.1    SPP81716.1    SPP81714.1    APGK01026882    KB740648    ENN79713.1    CH933807    KRG03704.1    EDW13347.1    CH954177    EDV59030.2    KK112841    KFM58675.1    KQS70602.1    GL732585    EFX74109.1    ODYU01003694    SOQ42778.1    KB630779    ERL83857.1    KQ434813    KZC06792.1    KB631357    ERL84262.1    ENN79712.1    GAPW01000098    JAC13500.1    CH963857    EDW76035.2    GEDC01022285    JAS15013.1    AGBW02010159    OWR49049.1    KQ415041    KOC58867.1    GGFJ01000993    MBW50134.1    AXCN02000716    AJVK01005894    AJVK01005895    CM000157    KRJ97497.1    GEDC01021511    JAS15787.1    AE014134    AAN10754.1    CM000361    CM002910    EDX04554.1    KMY89555.1    AF145601    AAD38576.1    AAF52958.2    CH480818    EDW52449.1    KMY89556.1    NEVH01002545    PNF42230.1    PYGN01000082    PSN54844.1    CP012523    ALC39282.1    PNF42229.1    UFQS01000218    UFQT01000218    SSX01504.1    SSX21884.1    SSX01503.1    SSX21883.1    GDHF01003182    JAI49132.1    EAT42739.1    IAAA01017254    LAA03679.1    GDHF01027225    GDHF01012263    JAI25089.1    JAI40051.1    CVRI01000057    CRL02177.1    GDHF01030990    JAI21324.1    GDHF01010271    GDHF01002021    JAI42043.1    JAI50293.1    GCES01071146    JAR15177.1    GDHF01010454    JAI41860.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000009046    UP000008820    UP000069940    + More
UP000249989    UP000245037    UP000007266    UP000092461    UP000242457    UP000007801    UP000030742    UP000007819    UP000183832    UP000268350    UP000019118    UP000009192    UP000008711    UP000054359    UP000000305    UP000076502    UP000007798    UP000007151    UP000053825    UP000079169    UP000075886    UP000092462    UP000002282    UP000000803    UP000000304    UP000001292    UP000192220    UP000235965    UP000075885    UP000092553    UP000095300    UP000005203    UP000075900    UP000091820    UP000075884   

PRIDE

Q8IPB7   

Pfam

PF01074   Glyco_hydro_38N        + More
PF09261   Alpha-mann_mid
PF07748   Glyco_hydro_38C
PF17677   Glyco_hydro38C2

Interpro

IPR027291   Glyco_hydro_38_N_sf        + More
IPR000602   Glyco_hydro_38_N       
IPR011330   Glyco_hydro/deAcase_b/a-brl       
IPR037094   Glyco_hydro_38_cen_sf       
IPR013780   Glyco_hydro_b       
IPR011682   Glyco_hydro_38_C       
IPR028995   Glyco_hydro_57/38_cen_sf       
IPR011013   Gal_mutarotase_sf_dom       
IPR015341   Glyco_hydro_38_cen       
IPR041147   GH38_C       

SUPFAM

SSF88713   SSF88713        + More
SSF88688   SSF88688       
SSF74650   SSF74650       

Gene 3D

3.20.110.10     1.20.1270.50     2.60.40.1180    

ProteinModelPortal

A0A2A4IWX3   A0A2A4IXJ1   A0A194PYQ5   A0A194RQK5   A0A2W1BMA0   A0A2H1VKW2   + More
E0VRZ4   A0A1Y1KHF4   Q178V9   A0A182GN05   U5EV98   A0A023EX89   A0A3G5BIG9   A0A0A1WJW5   A0A2P8Y360   A0A1L8DR39   A0A2A4JTC5   A0A146LUI9   A0A0A9VXB9   A0A034V372   A0A0A1WZV2   A0A1L8DQQ1   W8APD9   A0A0A1XEF2   A0A2A4JU30   A0A0P5C6A1   A0A2P8Y345   A0A0P5CFQ9   A0A1S4FBS2   D6WI18   A0A1B0CB94   A0A2A3EH85   B3MJI9   A0A3G5BIM3   A0A0P8XGR3   U4V0C3   A0A2P8Z1T1   A0A0P5C669   J9JL57   A0A2H8TPV8   A0A1J1I5Z3   A0A1J1I212   A0A0P5C6H0   Q178W1   A0A1Y1KKT1   A0A3B0JHP2   A0A3B0K7V8   A0A3B0JH41   N6TNX4   A0A0Q9XIT5   B4KHR0   B3N5F1   A0A087T0N6   A0A0Q5WN53   E9H264   A0A2H1VPQ4   U4TT01   A0A154P4N7   U4TTZ9   N6ULX5   A0A023EWA7   B4MUA9   A0A1B6CNQ5   A0A212F5R4   A0A0L7QJS0   A0A3Q0J7L7   A0A2M4BAP9   A0A182QEX5   A0A1B0GPJ0   A0A0R1DR73   A0A1B6CQR4   Q8IPB7   B4Q9B2   Q9VKV1   B4HWQ4   A0A0J9R086   A0A2I4CBX4   A0A2J7RN15   A0A2P8ZEB4   A0A182P6H2   A0A0M4ER29   A0A2J7RN33   A0A336LVA7   A0A1I8QD07   A0A336LYZ7   A0A1W3JCU7   A0A087ZZ79   A0A0K8WDF9   A0A182RK94   A0A1I8QCY1   Q178W0   A0A2L2Y690   A0A0K8UEK7   A0A1J1IUF7   A0A1A9W6T1   A0A0K8U3N4   A0A0K8VT60   A0A146VDZ7   A0A182NTB7   A0A0K8VTI9  

PDB

1O7D     E-value=1.24708e-31,     Score=334

KEGG

NA   

GO

GO:0004559   GO:0006013   GO:0030246   GO:0046872   GO:0016798   GO:0008152   GO:0005774   GO:0006517   GO:0004571   GO:0016021   GO:0005576   GO:0005975   GO:0003824   GO:0042626   GO:0019829   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Length:

124

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.15354

Exp number, first 60 AAs:

0.00297

Total prob of N-in:

0.50509

inside

1  -  100

TMhelix

101  -  123

outside

124  -  124

 

 

Pi

88.456005

Theta

63.915298

Tajima's D

1.198562

CLR

5.578457

CSRT

0.714214289285536

Interpretation

Uncertain