SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14060
Pre Gene Modal
BGIBMGA011376
Annotation
PREDICTED:_uncharacterized_protein_LOC101738861_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.831
 

Sequence

CDS
ATGAAATCACGTATTATCCACACGGAATACACGTCGTATCTACTCCTTTCATACATCTACTATTTGGCAGGAAGGCAGACTGTCCTACCTATAAAATTACCGACCACAGTCATTCTGATAACGTGCGTGCACACTCATATTGTTATACCTTGTATACACGTGGTCATCGTGTCGGCTATCAGAGACCTGACCGACATCGGTATTGTTAAAGGGGCGTTGTATTCCTCAGTTGGTGCTCCGACCATGTGGCTGTCGATCACGTTGAGCGACAGCGACGCTGCGGCCGCGGTGGTGGCTTTCAACTACGTCGCGTCGCTTGTAGCGATACCGCTGTCTTTGTTTATACTGTGTGGTCACCCATCGAAGCCAGAAACGAAGGTGCTTGTAACGGTCGTATCGGCAGTAGCGCCGTACGCTATAGGTGTGTACCACGCGAAAAGGCACGGCTCCACGAAGCGCAGCGCGACCGAAGCGAGAGCCTATGCTCTCGTTCTCTTATATGTGGAGTGCTGTCAGTACTTCGACAATGCGGGCGGCGTCATGAAGGTCTTCGACTTATTCGCCATCATTCTGCTCGTGTTCACATGTCTGCTAACAAGTACGACAGCTTGCTGGGCGTACGCTCGCTGTGGACTGATTGACGGCGAGCATTCGCGTACGATCGCTTTGTGTTCGATGTCTAAGTCAATTGAGTTTGCTTCGTGGAGATCGCAGTGCGCGATATCCGGGGCTTCGATGATGTTAGCTGCGTTACCCGCGCGAGCCCTCGTACTTGCTGTCATATCAGATGGCGAAAGGGCGTCTTCACCAGCGCCGGAATAA
Protein
MKSRIIHTEYTSYLLLSYIYYLAGRQTVLPIKLPTTVILITCVHTHIVIPCIHVVIVSAIRDLTDIGIVKGALYSSVGAPTMWLSITLSDSDAAAAVVAFNYVASLVAIPLSLFILCGHPSKPETKVLVTVVSAVAPYAIGVYHAKRHGSTKRSATEARAYALVLLYVECCQYFDNAGGVMKVFDLFAIILLVFTCLLTSTTACWAYARCGLIDGEHSRTIALCSMSKSIEFASWRSQCAISGASMMLAALPARALVLAVISDGERASSPAPE

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
273
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
131.71525
Exp number, first 60 AAs:
40.4802
Total prob of N-in:
0.88596
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  22
outside
23  -  36
TMhelix
37  -  59
inside
60  -  65
TMhelix
66  -  88
outside
89  -  92
TMhelix
93  -  115
inside
116  -  126
TMhelix
127  -  145
outside
146  -  185
TMhelix
186  -  208
inside
209  -  273
 
 

Population Genetic Test Statistics

Pi
223.91129
Theta
173.654104
Tajima's D
1.092262
CLR
0.389754
CSRT
0.68161591920404
Interpretation
Uncertain
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